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The map label for this gene is rng [H]

Identifier: 82701498

GI number: 82701498

Start: 395056

End: 396507

Strand: Direct

Name: rng [H]

Synonym: Nmul_A0364

Alternate gene names: 82701498

Gene position: 395056-396507 (Clockwise)

Preceding gene: 82701497

Following gene: 82701501

Centisome position: 12.41

GC content: 52.48

Gene sequence:

>1452_bases
ATGTCTTGTGAAATTCTTATCAATGTTACCCCCCAGGAAACGCGTGTCGCGGTGGTCGAGCATGGCGCCGTCCAGGAACT
GCACATAGAGCGCACCAGCAATTGCGGCATAGTGGGCAATATATATAACGGGCGCGTAATCCGGGTGCTGCCGGGGATGC
AATCCGCTTTCGTGGATATCGGTCTCGAACGGGCTGCTTTTCTCCACCTCGCTGATATCTGGCGCTTGCGGCAGAGTGAA
GACGCTGATAAACCGATTGAACAGCTGTTATACGAAGGAAAAAATATCCTCGTCCAGGTTATCAAGGATTCAATCGGTGC
CAAGGGTGCCCGCCTGTCGACTCAGGTCAGTATTGCGGGCCGTTTGCTGGTTTATCTGCCCCAAGTATCGCATATCGGCA
TTTCCCAGCGCATCGAAGATGAAACCGAACGGAAGTCGTTGCGTGAAAAACTGAAACATTTGTTGCCAGCCGCGGAAGAG
GGAGGATTCATTATCCGTACCGTGGCGGAAGCGGCAAGTGAACAGGATCTGCAAACGGATATCGAGTACTTGCACAAGCT
ATGGCGCGATATCAAGGAAAAATCCCTGATTTCCCAGCCGGCCTTACTGTATCAGGACCTGAATCTGAGTTTCCGCGTCT
TGCGCGACTTCATCAGTGATGATACGACTCGCATTCTGGTGGATTCGCGGGAAACTTTCCAGAAGATGGCGACCTTTGCA
CGAGTGTATATGGCCAACGTAGTGGAGCGCCTCGATCATTATGCGGGGGAGCGCCCTTTGTTCGAGTTGTATGGGGTGGA
AGATGAAATCGAGAAAGCCCTGGCGAGGCGTGTCGACCTGAAGTCCGGGGGTTATTTGATCATTGATCAGACCGAGGCGC
TTACCACCATCGATGTAAATACTGGGGGATTCATCGGCGTACGCAGTTTTGACGATACCATTTTCAAAACGAATCTCGAA
GCGGCCCAGGTCATTGCGCGCCAACTCCGTCTTCGAAATCTGGGAGGCATTATCATTATCGACTTCATAGATATGGAGAG
CGCGGAACACCAGAATGCCGTTCTCAGCGAATTCAAGAAGTCGTTGATGAAAGACCGGACTCACATGACGGTGAACGGTT
TCACCGCCCTCGGACTCGTGGAAATGACGCGCAAGCGGACGCGGGAGAGTCTGGCGCACATTTTGTGTGAAACCTGCCCG
ACTTGCCAAGGCCGCAGCAAAGTCCGGACGGCCCAGACCATGTGCTATGAAATCCTAAGGGAACTGCTGCGGGAATCCCG
TCAGTTCGATGCGCGTGAATTCCGCATTGTGGCTTCACAGCAGGTAATCGATCTGTTTCTCGACGAAGAATCCCAAAGCC
TGGCGCAACTTGCCGATTTTATCGCCAAACCCATCAGTCTTCAGGTGGAGGGGACGTATACCCAGGAACAATATGACCTG
ATTCTCATGTAG

Upstream 100 bases:

>100_bases
TAGCGGTGTCGTCGGATTGCCACTGTTTGAGACGGCGCAATTGCTTGAAGAATCCGCTATAAGAATATTTCAGTGAGCCG
CAATAAAAGCCGGATCTCTT

Downstream 100 bases:

>100_bases
CAGGTTTCACGGCAATAATCCCCTGGGGTCCGCTCCCTGAATATTCATTTTCTATCCCGGGCAGGCCGTTTCCTGTTTCC
GGAAGGTTCCTTTTTATATC

Product: ribonuclease

Products: NA

Alternate protein names: RNase G; Cytoplasmic axial filament protein [H]

Number of amino acids: Translated: 483; Mature: 482

Protein sequence:

>483_residues
MSCEILINVTPQETRVAVVEHGAVQELHIERTSNCGIVGNIYNGRVIRVLPGMQSAFVDIGLERAAFLHLADIWRLRQSE
DADKPIEQLLYEGKNILVQVIKDSIGAKGARLSTQVSIAGRLLVYLPQVSHIGISQRIEDETERKSLREKLKHLLPAAEE
GGFIIRTVAEAASEQDLQTDIEYLHKLWRDIKEKSLISQPALLYQDLNLSFRVLRDFISDDTTRILVDSRETFQKMATFA
RVYMANVVERLDHYAGERPLFELYGVEDEIEKALARRVDLKSGGYLIIDQTEALTTIDVNTGGFIGVRSFDDTIFKTNLE
AAQVIARQLRLRNLGGIIIIDFIDMESAEHQNAVLSEFKKSLMKDRTHMTVNGFTALGLVEMTRKRTRESLAHILCETCP
TCQGRSKVRTAQTMCYEILRELLRESRQFDAREFRIVASQQVIDLFLDEESQSLAQLADFIAKPISLQVEGTYTQEQYDL
ILM

Sequences:

>Translated_483_residues
MSCEILINVTPQETRVAVVEHGAVQELHIERTSNCGIVGNIYNGRVIRVLPGMQSAFVDIGLERAAFLHLADIWRLRQSE
DADKPIEQLLYEGKNILVQVIKDSIGAKGARLSTQVSIAGRLLVYLPQVSHIGISQRIEDETERKSLREKLKHLLPAAEE
GGFIIRTVAEAASEQDLQTDIEYLHKLWRDIKEKSLISQPALLYQDLNLSFRVLRDFISDDTTRILVDSRETFQKMATFA
RVYMANVVERLDHYAGERPLFELYGVEDEIEKALARRVDLKSGGYLIIDQTEALTTIDVNTGGFIGVRSFDDTIFKTNLE
AAQVIARQLRLRNLGGIIIIDFIDMESAEHQNAVLSEFKKSLMKDRTHMTVNGFTALGLVEMTRKRTRESLAHILCETCP
TCQGRSKVRTAQTMCYEILRELLRESRQFDAREFRIVASQQVIDLFLDEESQSLAQLADFIAKPISLQVEGTYTQEQYDL
ILM
>Mature_482_residues
SCEILINVTPQETRVAVVEHGAVQELHIERTSNCGIVGNIYNGRVIRVLPGMQSAFVDIGLERAAFLHLADIWRLRQSED
ADKPIEQLLYEGKNILVQVIKDSIGAKGARLSTQVSIAGRLLVYLPQVSHIGISQRIEDETERKSLREKLKHLLPAAEEG
GFIIRTVAEAASEQDLQTDIEYLHKLWRDIKEKSLISQPALLYQDLNLSFRVLRDFISDDTTRILVDSRETFQKMATFAR
VYMANVVERLDHYAGERPLFELYGVEDEIEKALARRVDLKSGGYLIIDQTEALTTIDVNTGGFIGVRSFDDTIFKTNLEA
AQVIARQLRLRNLGGIIIIDFIDMESAEHQNAVLSEFKKSLMKDRTHMTVNGFTALGLVEMTRKRTRESLAHILCETCPT
CQGRSKVRTAQTMCYEILRELLRESRQFDAREFRIVASQQVIDLFLDEESQSLAQLADFIAKPISLQVEGTYTQEQYDLI
LM

Specific function: Involved in the processing of the 5'-end of 16S rRNA. Could be involved in chromosome segregation and cell division. It may be one of the components of the cytoplasmic axial filaments bundles or merely regulate the formation of this structure [H]

COG id: COG1530

COG function: function code J; Ribonucleases G and E

Gene ontology:

Cell location: Cytoplasm, cytoskeleton [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Escherichia coli, GI87082235, Length=491, Percent_Identity=51.7311608961303, Blast_Score=504, Evalue=1e-144,
Organism=Escherichia coli, GI1787325, Length=465, Percent_Identity=37.8494623655914, Blast_Score=278, Evalue=5e-76,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR019307
- InterPro:   IPR022967
- InterPro:   IPR004659 [H]

Pfam domain/function: PF10150 RNase_E_G; PF00575 S1 [H]

EC number: 3.1.4.- [C]

Molecular weight: Translated: 54851; Mature: 54720

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSCEILINVTPQETRVAVVEHGAVQELHIERTSNCGIVGNIYNGRVIRVLPGMQSAFVDI
CCCEEEEEECCCCCEEEEEECCCHHHEEEEECCCCCEEEECCCCEEEEECCCCHHHHHHH
GLERAAFLHLADIWRLRQSEDADKPIEQLLYEGKNILVQVIKDSIGAKGARLSTQVSIAG
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEHHHHHC
RLLVYLPQVSHIGISQRIEDETERKSLREKLKHLLPAAEEGGFIIRTVAEAASEQDLQTD
EEEEEECCHHHCCCHHHHCHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHCHHHHHHH
IEYLHKLWRDIKEKSLISQPALLYQDLNLSFRVLRDFISDDTTRILVDSRETFQKMATFA
HHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH
RVYMANVVERLDHYAGERPLFELYGVEDEIEKALARRVDLKSGGYLIIDQTEALTTIDVN
HHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEC
TGGFIGVRSFDDTIFKTNLEAAQVIARQLRLRNLGGIIIIDFIDMESAEHQNAVLSEFKK
CCCEEEEECCCCHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHH
SLMKDRTHMTVNGFTALGLVEMTRKRTRESLAHILCETCPTCQGRSKVRTAQTMCYEILR
HHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
ELLRESRQFDAREFRIVASQQVIDLFLDEESQSLAQLADFIAKPISLQVEGTYTQEQYDL
HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCE
ILM
EEC
>Mature Secondary Structure 
SCEILINVTPQETRVAVVEHGAVQELHIERTSNCGIVGNIYNGRVIRVLPGMQSAFVDI
CCEEEEEECCCCCEEEEEECCCHHHEEEEECCCCCEEEECCCCEEEEECCCCHHHHHHH
GLERAAFLHLADIWRLRQSEDADKPIEQLLYEGKNILVQVIKDSIGAKGARLSTQVSIAG
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEHHHHHC
RLLVYLPQVSHIGISQRIEDETERKSLREKLKHLLPAAEEGGFIIRTVAEAASEQDLQTD
EEEEEECCHHHCCCHHHHCHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHCHHHHHHH
IEYLHKLWRDIKEKSLISQPALLYQDLNLSFRVLRDFISDDTTRILVDSRETFQKMATFA
HHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH
RVYMANVVERLDHYAGERPLFELYGVEDEIEKALARRVDLKSGGYLIIDQTEALTTIDVN
HHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEC
TGGFIGVRSFDDTIFKTNLEAAQVIARQLRLRNLGGIIIIDFIDMESAEHQNAVLSEFKK
CCCEEEEECCCCHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHH
SLMKDRTHMTVNGFTALGLVEMTRKRTRESLAHILCETCPTCQGRSKVRTAQTMCYEILR
HHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
ELLRESRQFDAREFRIVASQQVIDLFLDEESQSLAQLADFIAKPISLQVEGTYTQEQYDL
HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCE
ILM
EEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]