| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
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The map label for this gene is aceE [H]
Identifier: 82701492
GI number: 82701492
Start: 388273
End: 390942
Strand: Direct
Name: aceE [H]
Synonym: Nmul_A0358
Alternate gene names: 82701492
Gene position: 388273-390942 (Clockwise)
Preceding gene: 82701491
Following gene: 82701493
Centisome position: 12.19
GC content: 56.03
Gene sequence:
>2670_bases ATGGAACCTATACCGGATATAGACCCGACTGAAACCCAGGAATGGCTGGAGGCGCTGGAATCCGTGTTGACGCACGAGGG GACGGAGCGGGCGCACTATCTGCTGGAAAGACTGGTGGAAAAAGCGCGCCGGTCAGGTGCCTATCTTCCCTATAGCGCCA CCACGGCTTATATCAATACCATTCCTCCGGGAAAGGAAGAGTGGTCACCGGGAAATCATGCGCTGGAGCACCGCATCCGT TCCTATGTCCGCTGGAATTCCATGGCCATGGTGTTGCGCGCCAACCGGAATTCCAATGTCGGCGGGCATATTGCCAGCTT TGCCTCGGCCGCTACGCTATATGATGTCGGCTACAACCATTTCTGGCATGCCAGGTCGGAGAATCACGGTGGCGACCTGA TATTTGCACAGGGGCATTCATCGCCCGGTCTTTATGCCTATGCTTTTCTGCTGGGGGAACTGACAGAGGAGCAGCTCAAT AATTTCCGGCGGGAGGTGGGGGGAAAGGGACTGTCTTCCTATCCGCATCCATGGCTGATGCCTGACTTCTGGCAGTTCCC GACGGTATCAATGGGACTTGGGCCGCTGATGGCGATATATCATGCGCGCTTCATGAAGTATCTGGATAGCCGCGGACTGG TCAAGACGGAGGGCCGAAAAGTGTGGGCCTTCATGGGCGATGGAGAAATGGATGAACCTGAATCACTGGGGTCCATTTCG CTTGCGTCGCGCGAGAACCTGGACAACCTGATTTTTGTCATCAACTGCAACCTTCAGCGTCTCGACGGGCCGGTGCGTGG AAATGGCAAGATCATTCAGGAACTGGAAGCCGCTTTTCGCGGTTCGGGCTGGAACGTCATCAAGGTAATCTGGGGCTCAT ACTGGGACCCATTGCTTGCCAAAGACACGAAGGGGTTGCTGCAACAACGCATGATGGAATGCGTGGATGGCGAATATCAG ACTTTCAAGTCGAGAGACGGCGCCTATGTGCGTGAACATTTCTTCGGCAAATATCCGGAGCTGCTCGAGATGGTGGCGAA TATGTCCGACGATGACATATGGCGCCTGAACCGGGGCGGACACGATCCGCATAAGGTCTATGCCGCGTATTCAGCGGCGG TGAAGCACAAGGGCCAGCCCACCGTGATCCTCGCCAAGACGATCAAGGGTTACGGGATGGGTGAAGCGGGCGAAGCCCAG AATATCACTCATCAGCAGAAAAAGATGGGTACCACTTCACTCAAAGCGTTTCGTGACCGTTTCGGTCTGCCAATCAGCGA TGATGATATCGAGTCGGTACCCTACCTGAAATTCGACAAGGATTCGCCGGAATCCATCTACATGCACCAGCGACGCGAGG CATTGGGGGGGTTCATCCATCGTCGCCAGCGTAAGGCCGAGCCCTTGCAGATACCCCCGCTGTCCGCCTTCGACACTTTG CTCAAGGCAAGCGGTGAGGGAAGGGAATCTTCCACCACCATGGCTTTTGTGCGCATCCTCAATATCCTCATAAAGGACAA GAACATCGGCAAGCGGGTCGTGCCGATTGTGGCGGACGAGTCGCGCACCTTTGGCATGGAAGGCATGTTCCGGCAACTGG GCATCTGGTCTTCCACCGGGCAGCTTTACACGCCCGAGGATGCTGAGCAACTGATGTACTATAAGGAAGACAAGAACGGC CAGATCCTGCAGGAAGGTATCAATGAGGCGGGGGCCATGTCATCATGGATGGCCGCGGCAACTGCCTACAGTTCTCATGG CGTGCAGATGATCCCGTTCTACATTTACTATTCGATGTTCGGCTTCCAGCGCGTGGGGGATCTTTGCTGGGCGGCGGGAG ACATGCGCTGCCGCGGCTTCCTGCTGGGGGGCACTGCCGGCCGCACCACACTGAATGGCGAGGGATTGCAGCATGAGGAC GGTCACAGCCATCTGGCGGCATCGACTGTTCCCAATTGCATATCCTATGACCCGACCTTTGCCTACGAACTCACGGTCAT TATCCGGGATGGCCTGCGCCGCATGTGCGAAATGCAGGAGGATGTCTATTACTACATCACAGTGATGAACGAAAACTATT CGCATCCGGAAATGCCTGCAGGGGCGGAAGAAGGAATTCTGAAAGGCATGTACCTGTTCCGTGAAGGCAAGCCGGCAGGA GAAAAGGATTCCGGGTTGCGTGTTCAATTGCTCGGGTCCGGCGCCATTCTGCGCGAGGTGATTGCTGCGGCTGAAATACT GGAGGAGGAATTCGGTGTGACGGGTGATATCTGGAGTGTAACCAGCTTTACCCAGTTGAGACGCGAAGCGCTGGCGACAA CGCGCTGGAACATGCTGCACCCCACAGAACCGGCAAGGCTGTCGCACGTCGGCACGTGTCTCAAGGACCGGGAAGGTCCA GTGGTGGCGGCTACGGACTACATGAAGATTTTTGCCGACCAGATACGTGAATTTATTCCGGGGCGATACAAGGTGCTGGG TACAGATGGATTCGGACGTTCCGATACGCGCGAGCAATTGCGCCGCTTCTTCGAGGTCGACCGCCATTACATTACGATAG CCGCTCTGAAAGCGCTGGCCGAAGATGGCAGAATCGAGGCGGAAAGGGTGGCGCAGGCCATGGGCAAATTCGGCCTCGAT CCTGATAAACCCAATCCGATGACCATATAA
Upstream 100 bases:
>100_bases AACACCGTTGTGGCAGCCGAGCAGGCGCACGCCCGATTACAGGGTAATTGACAGCGCCTCTATCACATCGGGCAAGCGCC CGACAATTTCGAGACAAGAC
Downstream 100 bases:
>100_bases GAAGGCGGCAGTGAACTTTTGGGCGCGGAGAAGGCTAGACAACAGGACCGGAGCGCTGCGTCGTTTGACCTTGTTCTTCA TTGAGCCGCCAATTGCAAAT
Product: pyruvate dehydrogenase subunit E1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 889; Mature: 889
Protein sequence:
>889_residues MEPIPDIDPTETQEWLEALESVLTHEGTERAHYLLERLVEKARRSGAYLPYSATTAYINTIPPGKEEWSPGNHALEHRIR SYVRWNSMAMVLRANRNSNVGGHIASFASAATLYDVGYNHFWHARSENHGGDLIFAQGHSSPGLYAYAFLLGELTEEQLN NFRREVGGKGLSSYPHPWLMPDFWQFPTVSMGLGPLMAIYHARFMKYLDSRGLVKTEGRKVWAFMGDGEMDEPESLGSIS LASRENLDNLIFVINCNLQRLDGPVRGNGKIIQELEAAFRGSGWNVIKVIWGSYWDPLLAKDTKGLLQQRMMECVDGEYQ TFKSRDGAYVREHFFGKYPELLEMVANMSDDDIWRLNRGGHDPHKVYAAYSAAVKHKGQPTVILAKTIKGYGMGEAGEAQ NITHQQKKMGTTSLKAFRDRFGLPISDDDIESVPYLKFDKDSPESIYMHQRREALGGFIHRRQRKAEPLQIPPLSAFDTL LKASGEGRESSTTMAFVRILNILIKDKNIGKRVVPIVADESRTFGMEGMFRQLGIWSSTGQLYTPEDAEQLMYYKEDKNG QILQEGINEAGAMSSWMAAATAYSSHGVQMIPFYIYYSMFGFQRVGDLCWAAGDMRCRGFLLGGTAGRTTLNGEGLQHED GHSHLAASTVPNCISYDPTFAYELTVIIRDGLRRMCEMQEDVYYYITVMNENYSHPEMPAGAEEGILKGMYLFREGKPAG EKDSGLRVQLLGSGAILREVIAAAEILEEEFGVTGDIWSVTSFTQLRREALATTRWNMLHPTEPARLSHVGTCLKDREGP VVAATDYMKIFADQIREFIPGRYKVLGTDGFGRSDTREQLRRFFEVDRHYITIAALKALAEDGRIEAERVAQAMGKFGLD PDKPNPMTI
Sequences:
>Translated_889_residues MEPIPDIDPTETQEWLEALESVLTHEGTERAHYLLERLVEKARRSGAYLPYSATTAYINTIPPGKEEWSPGNHALEHRIR SYVRWNSMAMVLRANRNSNVGGHIASFASAATLYDVGYNHFWHARSENHGGDLIFAQGHSSPGLYAYAFLLGELTEEQLN NFRREVGGKGLSSYPHPWLMPDFWQFPTVSMGLGPLMAIYHARFMKYLDSRGLVKTEGRKVWAFMGDGEMDEPESLGSIS LASRENLDNLIFVINCNLQRLDGPVRGNGKIIQELEAAFRGSGWNVIKVIWGSYWDPLLAKDTKGLLQQRMMECVDGEYQ TFKSRDGAYVREHFFGKYPELLEMVANMSDDDIWRLNRGGHDPHKVYAAYSAAVKHKGQPTVILAKTIKGYGMGEAGEAQ NITHQQKKMGTTSLKAFRDRFGLPISDDDIESVPYLKFDKDSPESIYMHQRREALGGFIHRRQRKAEPLQIPPLSAFDTL LKASGEGRESSTTMAFVRILNILIKDKNIGKRVVPIVADESRTFGMEGMFRQLGIWSSTGQLYTPEDAEQLMYYKEDKNG QILQEGINEAGAMSSWMAAATAYSSHGVQMIPFYIYYSMFGFQRVGDLCWAAGDMRCRGFLLGGTAGRTTLNGEGLQHED GHSHLAASTVPNCISYDPTFAYELTVIIRDGLRRMCEMQEDVYYYITVMNENYSHPEMPAGAEEGILKGMYLFREGKPAG EKDSGLRVQLLGSGAILREVIAAAEILEEEFGVTGDIWSVTSFTQLRREALATTRWNMLHPTEPARLSHVGTCLKDREGP VVAATDYMKIFADQIREFIPGRYKVLGTDGFGRSDTREQLRRFFEVDRHYITIAALKALAEDGRIEAERVAQAMGKFGLD PDKPNPMTI >Mature_889_residues MEPIPDIDPTETQEWLEALESVLTHEGTERAHYLLERLVEKARRSGAYLPYSATTAYINTIPPGKEEWSPGNHALEHRIR SYVRWNSMAMVLRANRNSNVGGHIASFASAATLYDVGYNHFWHARSENHGGDLIFAQGHSSPGLYAYAFLLGELTEEQLN NFRREVGGKGLSSYPHPWLMPDFWQFPTVSMGLGPLMAIYHARFMKYLDSRGLVKTEGRKVWAFMGDGEMDEPESLGSIS LASRENLDNLIFVINCNLQRLDGPVRGNGKIIQELEAAFRGSGWNVIKVIWGSYWDPLLAKDTKGLLQQRMMECVDGEYQ TFKSRDGAYVREHFFGKYPELLEMVANMSDDDIWRLNRGGHDPHKVYAAYSAAVKHKGQPTVILAKTIKGYGMGEAGEAQ NITHQQKKMGTTSLKAFRDRFGLPISDDDIESVPYLKFDKDSPESIYMHQRREALGGFIHRRQRKAEPLQIPPLSAFDTL LKASGEGRESSTTMAFVRILNILIKDKNIGKRVVPIVADESRTFGMEGMFRQLGIWSSTGQLYTPEDAEQLMYYKEDKNG QILQEGINEAGAMSSWMAAATAYSSHGVQMIPFYIYYSMFGFQRVGDLCWAAGDMRCRGFLLGGTAGRTTLNGEGLQHED GHSHLAASTVPNCISYDPTFAYELTVIIRDGLRRMCEMQEDVYYYITVMNENYSHPEMPAGAEEGILKGMYLFREGKPAG EKDSGLRVQLLGSGAILREVIAAAEILEEEFGVTGDIWSVTSFTQLRREALATTRWNMLHPTEPARLSHVGTCLKDREGP VVAATDYMKIFADQIREFIPGRYKVLGTDGFGRSDTREQLRRFFEVDRHYITIAALKALAEDGRIEAERVAQAMGKFGLD PDKPNPMTI
Specific function: The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components:pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydroge
COG id: COG2609
COG function: function code C; Pyruvate dehydrogenase complex, dehydrogenase (E1) component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786304, Length=886, Percent_Identity=60.7223476297968, Blast_Score=1120, Evalue=0.0,
Paralogues:
None
Copy number: 1140 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 400 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 6,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004660 - InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005474 [H]
Pfam domain/function: PF00456 Transketolase_N [H]
EC number: =1.2.4.1 [H]
Molecular weight: Translated: 100009; Mature: 100009
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPIPDIDPTETQEWLEALESVLTHEGTERAHYLLERLVEKARRSGAYLPYSATTAYINT CCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEC IPPGKEEWSPGNHALEHRIRSYVRWNSMAMVLRANRNSNVGGHIASFASAATLYDVGYNH CCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCC FWHARSENHGGDLIFAQGHSSPGLYAYAFLLGELTEEQLNNFRREVGGKGLSSYPHPWLM EECCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC PDFWQFPTVSMGLGPLMAIYHARFMKYLDSRGLVKTEGRKVWAFMGDGEMDEPESLGSIS CCCCCCCCCHHCHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEECCCCCCCCHHCCCEE LASRENLDNLIFVINCNLQRLDGPVRGNGKIIQELEAAFRGSGWNVIKVIWGSYWDPLLA EHHHCCCCCEEEEEECCHHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHH KDTKGLLQQRMMECVDGEYQTFKSRDGAYVREHFFGKYPELLEMVANMSDDDIWRLNRGG HHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHCCCCHHHHHHHHCCCCCCEEECCCCC HDPHKVYAAYSAAVKHKGQPTVILAKTIKGYGMGEAGEAQNITHQQKKMGTTSLKAFRDR CCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHH FGLPISDDDIESVPYLKFDKDSPESIYMHQRREALGGFIHRRQRKAEPLQIPPLSAFDTL CCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH LKASGEGRESSTTMAFVRILNILIKDKNIGKRVVPIVADESRTFGMEGMFRQLGIWSSTG HHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCC QLYTPEDAEQLMYYKEDKNGQILQEGINEAGAMSSWMAAATAYSSHGVQMIPFYIYYSMF CEECCCCHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH GFQRVGDLCWAAGDMRCRGFLLGGTAGRTTLNGEGLQHEDGHSHLAASTVPNCISYDPTF HHHHHHHHHHCCCCCEEEEEEEECCCCCCEECCCCCCCCCCCCHHHHHHCCCCCCCCCCH AYELTVIIRDGLRRMCEMQEDVYYYITVMNENYSHPEMPAGAEEGILKGMYLFREGKPAG HEEEHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHEECCCCCC EKDSGLRVQLLGSGAILREVIAAAEILEEEFGVTGDIWSVTSFTQLRREALATTRWNMLH CCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC PTEPARLSHVGTCLKDREGPVVAATDYMKIFADQIREFIPGRYKVLGTDGFGRSDTREQL CCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHH RRFFEVDRHYITIAALKALAEDGRIEAERVAQAMGKFGLDPDKPNPMTI HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MEPIPDIDPTETQEWLEALESVLTHEGTERAHYLLERLVEKARRSGAYLPYSATTAYINT CCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEC IPPGKEEWSPGNHALEHRIRSYVRWNSMAMVLRANRNSNVGGHIASFASAATLYDVGYNH CCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCC FWHARSENHGGDLIFAQGHSSPGLYAYAFLLGELTEEQLNNFRREVGGKGLSSYPHPWLM EECCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC PDFWQFPTVSMGLGPLMAIYHARFMKYLDSRGLVKTEGRKVWAFMGDGEMDEPESLGSIS CCCCCCCCCHHCHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEECCCCCCCCHHCCCEE LASRENLDNLIFVINCNLQRLDGPVRGNGKIIQELEAAFRGSGWNVIKVIWGSYWDPLLA EHHHCCCCCEEEEEECCHHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHH KDTKGLLQQRMMECVDGEYQTFKSRDGAYVREHFFGKYPELLEMVANMSDDDIWRLNRGG HHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHCCCCHHHHHHHHCCCCCCEEECCCCC HDPHKVYAAYSAAVKHKGQPTVILAKTIKGYGMGEAGEAQNITHQQKKMGTTSLKAFRDR CCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHH FGLPISDDDIESVPYLKFDKDSPESIYMHQRREALGGFIHRRQRKAEPLQIPPLSAFDTL CCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH LKASGEGRESSTTMAFVRILNILIKDKNIGKRVVPIVADESRTFGMEGMFRQLGIWSSTG HHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCC QLYTPEDAEQLMYYKEDKNGQILQEGINEAGAMSSWMAAATAYSSHGVQMIPFYIYYSMF CEECCCCHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH GFQRVGDLCWAAGDMRCRGFLLGGTAGRTTLNGEGLQHEDGHSHLAASTVPNCISYDPTF HHHHHHHHHHCCCCCEEEEEEEECCCCCCEECCCCCCCCCCCCHHHHHHCCCCCCCCCCH AYELTVIIRDGLRRMCEMQEDVYYYITVMNENYSHPEMPAGAEEGILKGMYLFREGKPAG HEEEHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHEECCCCCC EKDSGLRVQLLGSGAILREVIAAAEILEEEFGVTGDIWSVTSFTQLRREALATTRWNMLH CCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC PTEPARLSHVGTCLKDREGPVVAATDYMKIFADQIREFIPGRYKVLGTDGFGRSDTREQL CCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHH RRFFEVDRHYITIAALKALAEDGRIEAERVAQAMGKFGLDPDKPNPMTI HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8021225 [H]