Definition Nitrosospira multiformis ATCC 25196 chromosome, complete genome.
Accession NC_007614
Length 3,184,243

Click here to switch to the map view.

The map label for this gene is yyaL [H]

Identifier: 82701479

GI number: 82701479

Start: 375899

End: 378001

Strand: Reverse

Name: yyaL [H]

Synonym: Nmul_A0345

Alternate gene names: 82701479

Gene position: 378001-375899 (Counterclockwise)

Preceding gene: 82701480

Following gene: 82701478

Centisome position: 11.87

GC content: 56.59

Gene sequence:

>2103_bases
ATGCCCAACCATCTTGCCGGTGAAACCAGCCCCTACCTGCTGCAGCATGCAGATAATCCTGTCGACTGGTATCCCTGGGG
AGAAGAAGCACTGACGCTCGCCCGTGCGCAAGACAGGCCGATCCTGCTGTCCGTCGGCTACTCTGCCTGCCACTGGTGCC
ACGTGATGGCGCACGAATGCTTCGAAGATGCGGAAGTTGCCGAAGTCATGAACCGGTACTTCATCAATATCAAGGTGGAT
CGCGAGGAACGCCCGGACATCGATCAGATTTATCAGACCGCGCTCTACATGCTGACACAGCGCAGCGGCGGCTGGCCCCT
GACGCTTTTTCTGACACCCGATCAAAAACCATTCTTCGGCGGCACCTACTTTCCCAAAACGCCGCGTCACAGTCTGCCGG
GTTTCCTCGATTTATTGCCTCGGGTGGCGGAAACCTACCGCGTTCGCCGCCCTGAGATCGAACGCCAGAGTGCCTCGTTG
CTCAAATCCTTCGCTAACATGCTGCCCTCAAAAGCACCGGAGGCTCCGGTATTTTCCGAGCGCCCCCTGGAACAGGCACT
GGCTGAACTGAAAAACCGGTTCGACTCCGAAAATGGGGGTTTTGGCGAGCCGCCGAAGTTCCTGCACCTGACCGAACTGG
ACTTCTGTCTGCGGCGCTACTTCACAGCCGGCAATAGCGAGGCATTGCACATGGCCACGCTGACATTGGAGAAAATGGCG
GAAGGCGGCATCTACGACCAGGTAGGTGGCGGGTTCTACCGTTACAGTACCGACAAGCAGTGGCAGATTCCGCATTTTGA
AAAAATGCTTTATGACAATGGCCCCCTGCTGCACCTCTATGCGGATGCCTGGATCGCCTCCGGAAATCCTCTGTTTGCCC
GGATTGTGGAAGAAACCGCTACCTGGGTCATGCGCGAAATGCAGCCAGAATATGAAGAGAATGAAAAGAGAACGGGAGCG
GGCTACTGGTCGACTCTGGATGCCGACTCGGAAAACGTCGAAGGCAAATTCTACGTATGGGATCGCAGCGAAGCCTCGCA
TATTCTTTCACGTCGGGAATATGTCGTAGCCGCCAGTCACTATGGTCTGTCCCAGCCGGCAAACTTCGGAAACAGATACT
GGCATCTGGCTGTGGCCCAATCGCTGCCCGAGATAGCTGAAAACTTCGGTGTCACCTACGCAGAAGCACGACAATGGCTT
GAATCAGGGCGCAAGAAACTGCTTGCACAGCGCCAATGTCGCGTTCGTCCCGGACGGGATGAGAAAATCCTGACCAGCTG
GAATGGACTGATGATCAAGGGCATGGCTCGAGCCGGACGCGTATTCGGTCGCGACGACTGGGTACGCTCGGCTATCTGTG
CCGTGGATTTCATTCGTTCCACACTCTGGAAAAATGGCCGTCTGCTGGCAACCTGGAAAGACGGCAATGCACGTCTCAAT
GCCTATCTCGACGATTACGCTTTCCTGCTGGACGGATTGCTGGAGCTGATGCAGACAACGTTCCGCCCGGTGGATCTGGA
TTTTGCCATTGCGCTGGCTGAGGTTCTTCTGGACCAGTTCGAAGACAAGGAAGCGGGCGGTTTTTTCTTTACCAGTCATG
ATCATGAAAATCTGATCCATCGTCCCAAGCCTGGTTATGACAATGCAACACCATCCGGCAACGGCGTCGCCGCCCATACT
CTTCAGCGCATGGGTTATCTGCTGGGGGAATTCCGTTATCTGCAGGCGGCGGAACGCGCACTGCGGCTCTTCTACCCTGC
CTTGCTCCGGCACCCCGACTCCTGTTGCAGCTTGCTTCTGGCGCTCGAGCAGTGGCTCACGCCCCCCCCCGTTGTCATAC
TGCGGGGAAAAGCGGAGCCGATGGCGAAATGGGAAAATGCCTTGCGTCAACGCGTCCCCATCGCCCTTGTGCTTGCGCTG
CCGGTTGAGCGTGTGACGCCTGCGGCGCTGCCGCCGAGCCTTGCCAAGCCCGTTCCGTCAGGGATGGGTGTCAACGCTTG
GGTCTGTCATGGCGTTAAGTGCCTACCGGAGGTCACTGACTTGCAGGAATTGCTGCGTATCAGCGAAATTCGAGGTAAGA
TAAGGTCCCTTTTCTATAATTAA

Upstream 100 bases:

>100_bases
CGCGCTACACCCGGGGAGTGCTCGCTAAATATTCGAAGCTCGTCTCGAGTGCCAGCCGCGGCGCAATCACCGACTAGTCC
GTTTTTTCCACCACAAAGCC

Downstream 100 bases:

>100_bases
CGGATAAAAGGAGTGTGTGTAATGAAAGCTGTCTGGATGGGAATGGTTGCGGCATCAGCTTTGTTGGTTGTCGGTACCGC
GCAGGCGAGCCCCGAACTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 700; Mature: 699

Protein sequence:

>700_residues
MPNHLAGETSPYLLQHADNPVDWYPWGEEALTLARAQDRPILLSVGYSACHWCHVMAHECFEDAEVAEVMNRYFINIKVD
REERPDIDQIYQTALYMLTQRSGGWPLTLFLTPDQKPFFGGTYFPKTPRHSLPGFLDLLPRVAETYRVRRPEIERQSASL
LKSFANMLPSKAPEAPVFSERPLEQALAELKNRFDSENGGFGEPPKFLHLTELDFCLRRYFTAGNSEALHMATLTLEKMA
EGGIYDQVGGGFYRYSTDKQWQIPHFEKMLYDNGPLLHLYADAWIASGNPLFARIVEETATWVMREMQPEYEENEKRTGA
GYWSTLDADSENVEGKFYVWDRSEASHILSRREYVVAASHYGLSQPANFGNRYWHLAVAQSLPEIAENFGVTYAEARQWL
ESGRKKLLAQRQCRVRPGRDEKILTSWNGLMIKGMARAGRVFGRDDWVRSAICAVDFIRSTLWKNGRLLATWKDGNARLN
AYLDDYAFLLDGLLELMQTTFRPVDLDFAIALAEVLLDQFEDKEAGGFFFTSHDHENLIHRPKPGYDNATPSGNGVAAHT
LQRMGYLLGEFRYLQAAERALRLFYPALLRHPDSCCSLLLALEQWLTPPPVVILRGKAEPMAKWENALRQRVPIALVLAL
PVERVTPAALPPSLAKPVPSGMGVNAWVCHGVKCLPEVTDLQELLRISEIRGKIRSLFYN

Sequences:

>Translated_700_residues
MPNHLAGETSPYLLQHADNPVDWYPWGEEALTLARAQDRPILLSVGYSACHWCHVMAHECFEDAEVAEVMNRYFINIKVD
REERPDIDQIYQTALYMLTQRSGGWPLTLFLTPDQKPFFGGTYFPKTPRHSLPGFLDLLPRVAETYRVRRPEIERQSASL
LKSFANMLPSKAPEAPVFSERPLEQALAELKNRFDSENGGFGEPPKFLHLTELDFCLRRYFTAGNSEALHMATLTLEKMA
EGGIYDQVGGGFYRYSTDKQWQIPHFEKMLYDNGPLLHLYADAWIASGNPLFARIVEETATWVMREMQPEYEENEKRTGA
GYWSTLDADSENVEGKFYVWDRSEASHILSRREYVVAASHYGLSQPANFGNRYWHLAVAQSLPEIAENFGVTYAEARQWL
ESGRKKLLAQRQCRVRPGRDEKILTSWNGLMIKGMARAGRVFGRDDWVRSAICAVDFIRSTLWKNGRLLATWKDGNARLN
AYLDDYAFLLDGLLELMQTTFRPVDLDFAIALAEVLLDQFEDKEAGGFFFTSHDHENLIHRPKPGYDNATPSGNGVAAHT
LQRMGYLLGEFRYLQAAERALRLFYPALLRHPDSCCSLLLALEQWLTPPPVVILRGKAEPMAKWENALRQRVPIALVLAL
PVERVTPAALPPSLAKPVPSGMGVNAWVCHGVKCLPEVTDLQELLRISEIRGKIRSLFYN
>Mature_699_residues
PNHLAGETSPYLLQHADNPVDWYPWGEEALTLARAQDRPILLSVGYSACHWCHVMAHECFEDAEVAEVMNRYFINIKVDR
EERPDIDQIYQTALYMLTQRSGGWPLTLFLTPDQKPFFGGTYFPKTPRHSLPGFLDLLPRVAETYRVRRPEIERQSASLL
KSFANMLPSKAPEAPVFSERPLEQALAELKNRFDSENGGFGEPPKFLHLTELDFCLRRYFTAGNSEALHMATLTLEKMAE
GGIYDQVGGGFYRYSTDKQWQIPHFEKMLYDNGPLLHLYADAWIASGNPLFARIVEETATWVMREMQPEYEENEKRTGAG
YWSTLDADSENVEGKFYVWDRSEASHILSRREYVVAASHYGLSQPANFGNRYWHLAVAQSLPEIAENFGVTYAEARQWLE
SGRKKLLAQRQCRVRPGRDEKILTSWNGLMIKGMARAGRVFGRDDWVRSAICAVDFIRSTLWKNGRLLATWKDGNARLNA
YLDDYAFLLDGLLELMQTTFRPVDLDFAIALAEVLLDQFEDKEAGGFFFTSHDHENLIHRPKPGYDNATPSGNGVAAHTL
QRMGYLLGEFRYLQAAERALRLFYPALLRHPDSCCSLLLALEQWLTPPPVVILRGKAEPMAKWENALRQRVPIALVLALP
VERVTPAALPPSLAKPVPSGMGVNAWVCHGVKCLPEVTDLQELLRISEIRGKIRSLFYN

Specific function: Unknown

COG id: COG1331

COG function: function code O; Highly conserved protein containing a thioredoxin domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To C.elegans B0495.5 [H]

Homologues:

Organism=Homo sapiens, GI31542723, Length=746, Percent_Identity=34.8525469168901, Blast_Score=373, Evalue=1e-103,
Organism=Caenorhabditis elegans, GI25147430, Length=721, Percent_Identity=32.0388349514563, Blast_Score=362, Evalue=1e-100,
Organism=Drosophila melanogaster, GI20129985, Length=732, Percent_Identity=33.879781420765, Blast_Score=397, Evalue=1e-110,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR012341
- InterPro:   IPR010819
- InterPro:   IPR004879
- InterPro:   IPR005198
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF03190 DUF255; PF07221 GlcNAc_2-epim; PF03663 Glyco_hydro_76 [H]

EC number: NA

Molecular weight: Translated: 79667; Mature: 79536

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNHLAGETSPYLLQHADNPVDWYPWGEEALTLARAQDRPILLSVGYSACHWCHVMAHEC
CCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHH
FEDAEVAEVMNRYFINIKVDREERPDIDQIYQTALYMLTQRSGGWPLTLFLTPDQKPFFG
HCHHHHHHHHHCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCC
GTYFPKTPRHSLPGFLDLLPRVAETYRVRRPEIERQSASLLKSFANMLPSKAPEAPVFSE
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
RPLEQALAELKNRFDSENGGFGEPPKFLHLTELDFCLRRYFTAGNSEALHMATLTLEKMA
CCHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHH
EGGIYDQVGGGFYRYSTDKQWQIPHFEKMLYDNGPLLHLYADAWIASGNPLFARIVEETA
CCCCCHHCCCCEEEECCCCCCCCCHHHHHHHCCCCEEEEEECCEEECCCHHHHHHHHHHH
TWVMREMQPEYEENEKRTGAGYWSTLDADSENVEGKFYVWDRSEASHILSRREYVVAASH
HHHHHHHCCCHHHCCCCCCCCCCEECCCCCCCCCCEEEEECCCHHHHHHHHHHEEEEECC
YGLSQPANFGNRYWHLAVAQSLPEIAENFGVTYAEARQWLESGRKKLLAQRQCRVRPGRD
CCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EKILTSWNGLMIKGMARAGRVFGRDDWVRSAICAVDFIRSTLWKNGRLLATWKDGNARLN
CEEEECCCCEEEECHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEE
AYLDDYAFLLDGLLELMQTTFRPVDLDFAIALAEVLLDQFEDKEAGGFFFTSHDHENLIH
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCC
RPKPGYDNATPSGNGVAAHTLQRMGYLLGEFRYLQAAERALRLFYPALLRHPDSCCSLLL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
ALEQWLTPPPVVILRGKAEPMAKWENALRQRVPIALVLALPVERVTPAALPPSLAKPVPS
HHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCEEEEEECCHHHCCCCCCCCHHHCCCCC
GMGVNAWVCHGVKCLPEVTDLQELLRISEIRGKIRSLFYN
CCCCCHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PNHLAGETSPYLLQHADNPVDWYPWGEEALTLARAQDRPILLSVGYSACHWCHVMAHEC
CCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHH
FEDAEVAEVMNRYFINIKVDREERPDIDQIYQTALYMLTQRSGGWPLTLFLTPDQKPFFG
HCHHHHHHHHHCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCC
GTYFPKTPRHSLPGFLDLLPRVAETYRVRRPEIERQSASLLKSFANMLPSKAPEAPVFSE
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
RPLEQALAELKNRFDSENGGFGEPPKFLHLTELDFCLRRYFTAGNSEALHMATLTLEKMA
CCHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHH
EGGIYDQVGGGFYRYSTDKQWQIPHFEKMLYDNGPLLHLYADAWIASGNPLFARIVEETA
CCCCCHHCCCCEEEECCCCCCCCCHHHHHHHCCCCEEEEEECCEEECCCHHHHHHHHHHH
TWVMREMQPEYEENEKRTGAGYWSTLDADSENVEGKFYVWDRSEASHILSRREYVVAASH
HHHHHHHCCCHHHCCCCCCCCCCEECCCCCCCCCCEEEEECCCHHHHHHHHHHEEEEECC
YGLSQPANFGNRYWHLAVAQSLPEIAENFGVTYAEARQWLESGRKKLLAQRQCRVRPGRD
CCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EKILTSWNGLMIKGMARAGRVFGRDDWVRSAICAVDFIRSTLWKNGRLLATWKDGNARLN
CEEEECCCCEEEECHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEE
AYLDDYAFLLDGLLELMQTTFRPVDLDFAIALAEVLLDQFEDKEAGGFFFTSHDHENLIH
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCC
RPKPGYDNATPSGNGVAAHTLQRMGYLLGEFRYLQAAERALRLFYPALLRHPDSCCSLLL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
ALEQWLTPPPVVILRGKAEPMAKWENALRQRVPIALVLALPVERVTPAALPPSLAKPVPS
HHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCEEEEEECCHHHCCCCCCCCHHHCCCCC
GMGVNAWVCHGVKCLPEVTDLQELLRISEIRGKIRSLFYN
CCCCCHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]