| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
Click here to switch to the map view.
The map label for this gene is yyaL [H]
Identifier: 82701479
GI number: 82701479
Start: 375899
End: 378001
Strand: Reverse
Name: yyaL [H]
Synonym: Nmul_A0345
Alternate gene names: 82701479
Gene position: 378001-375899 (Counterclockwise)
Preceding gene: 82701480
Following gene: 82701478
Centisome position: 11.87
GC content: 56.59
Gene sequence:
>2103_bases ATGCCCAACCATCTTGCCGGTGAAACCAGCCCCTACCTGCTGCAGCATGCAGATAATCCTGTCGACTGGTATCCCTGGGG AGAAGAAGCACTGACGCTCGCCCGTGCGCAAGACAGGCCGATCCTGCTGTCCGTCGGCTACTCTGCCTGCCACTGGTGCC ACGTGATGGCGCACGAATGCTTCGAAGATGCGGAAGTTGCCGAAGTCATGAACCGGTACTTCATCAATATCAAGGTGGAT CGCGAGGAACGCCCGGACATCGATCAGATTTATCAGACCGCGCTCTACATGCTGACACAGCGCAGCGGCGGCTGGCCCCT GACGCTTTTTCTGACACCCGATCAAAAACCATTCTTCGGCGGCACCTACTTTCCCAAAACGCCGCGTCACAGTCTGCCGG GTTTCCTCGATTTATTGCCTCGGGTGGCGGAAACCTACCGCGTTCGCCGCCCTGAGATCGAACGCCAGAGTGCCTCGTTG CTCAAATCCTTCGCTAACATGCTGCCCTCAAAAGCACCGGAGGCTCCGGTATTTTCCGAGCGCCCCCTGGAACAGGCACT GGCTGAACTGAAAAACCGGTTCGACTCCGAAAATGGGGGTTTTGGCGAGCCGCCGAAGTTCCTGCACCTGACCGAACTGG ACTTCTGTCTGCGGCGCTACTTCACAGCCGGCAATAGCGAGGCATTGCACATGGCCACGCTGACATTGGAGAAAATGGCG GAAGGCGGCATCTACGACCAGGTAGGTGGCGGGTTCTACCGTTACAGTACCGACAAGCAGTGGCAGATTCCGCATTTTGA AAAAATGCTTTATGACAATGGCCCCCTGCTGCACCTCTATGCGGATGCCTGGATCGCCTCCGGAAATCCTCTGTTTGCCC GGATTGTGGAAGAAACCGCTACCTGGGTCATGCGCGAAATGCAGCCAGAATATGAAGAGAATGAAAAGAGAACGGGAGCG GGCTACTGGTCGACTCTGGATGCCGACTCGGAAAACGTCGAAGGCAAATTCTACGTATGGGATCGCAGCGAAGCCTCGCA TATTCTTTCACGTCGGGAATATGTCGTAGCCGCCAGTCACTATGGTCTGTCCCAGCCGGCAAACTTCGGAAACAGATACT GGCATCTGGCTGTGGCCCAATCGCTGCCCGAGATAGCTGAAAACTTCGGTGTCACCTACGCAGAAGCACGACAATGGCTT GAATCAGGGCGCAAGAAACTGCTTGCACAGCGCCAATGTCGCGTTCGTCCCGGACGGGATGAGAAAATCCTGACCAGCTG GAATGGACTGATGATCAAGGGCATGGCTCGAGCCGGACGCGTATTCGGTCGCGACGACTGGGTACGCTCGGCTATCTGTG CCGTGGATTTCATTCGTTCCACACTCTGGAAAAATGGCCGTCTGCTGGCAACCTGGAAAGACGGCAATGCACGTCTCAAT GCCTATCTCGACGATTACGCTTTCCTGCTGGACGGATTGCTGGAGCTGATGCAGACAACGTTCCGCCCGGTGGATCTGGA TTTTGCCATTGCGCTGGCTGAGGTTCTTCTGGACCAGTTCGAAGACAAGGAAGCGGGCGGTTTTTTCTTTACCAGTCATG ATCATGAAAATCTGATCCATCGTCCCAAGCCTGGTTATGACAATGCAACACCATCCGGCAACGGCGTCGCCGCCCATACT CTTCAGCGCATGGGTTATCTGCTGGGGGAATTCCGTTATCTGCAGGCGGCGGAACGCGCACTGCGGCTCTTCTACCCTGC CTTGCTCCGGCACCCCGACTCCTGTTGCAGCTTGCTTCTGGCGCTCGAGCAGTGGCTCACGCCCCCCCCCGTTGTCATAC TGCGGGGAAAAGCGGAGCCGATGGCGAAATGGGAAAATGCCTTGCGTCAACGCGTCCCCATCGCCCTTGTGCTTGCGCTG CCGGTTGAGCGTGTGACGCCTGCGGCGCTGCCGCCGAGCCTTGCCAAGCCCGTTCCGTCAGGGATGGGTGTCAACGCTTG GGTCTGTCATGGCGTTAAGTGCCTACCGGAGGTCACTGACTTGCAGGAATTGCTGCGTATCAGCGAAATTCGAGGTAAGA TAAGGTCCCTTTTCTATAATTAA
Upstream 100 bases:
>100_bases CGCGCTACACCCGGGGAGTGCTCGCTAAATATTCGAAGCTCGTCTCGAGTGCCAGCCGCGGCGCAATCACCGACTAGTCC GTTTTTTCCACCACAAAGCC
Downstream 100 bases:
>100_bases CGGATAAAAGGAGTGTGTGTAATGAAAGCTGTCTGGATGGGAATGGTTGCGGCATCAGCTTTGTTGGTTGTCGGTACCGC GCAGGCGAGCCCCGAACTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 700; Mature: 699
Protein sequence:
>700_residues MPNHLAGETSPYLLQHADNPVDWYPWGEEALTLARAQDRPILLSVGYSACHWCHVMAHECFEDAEVAEVMNRYFINIKVD REERPDIDQIYQTALYMLTQRSGGWPLTLFLTPDQKPFFGGTYFPKTPRHSLPGFLDLLPRVAETYRVRRPEIERQSASL LKSFANMLPSKAPEAPVFSERPLEQALAELKNRFDSENGGFGEPPKFLHLTELDFCLRRYFTAGNSEALHMATLTLEKMA EGGIYDQVGGGFYRYSTDKQWQIPHFEKMLYDNGPLLHLYADAWIASGNPLFARIVEETATWVMREMQPEYEENEKRTGA GYWSTLDADSENVEGKFYVWDRSEASHILSRREYVVAASHYGLSQPANFGNRYWHLAVAQSLPEIAENFGVTYAEARQWL ESGRKKLLAQRQCRVRPGRDEKILTSWNGLMIKGMARAGRVFGRDDWVRSAICAVDFIRSTLWKNGRLLATWKDGNARLN AYLDDYAFLLDGLLELMQTTFRPVDLDFAIALAEVLLDQFEDKEAGGFFFTSHDHENLIHRPKPGYDNATPSGNGVAAHT LQRMGYLLGEFRYLQAAERALRLFYPALLRHPDSCCSLLLALEQWLTPPPVVILRGKAEPMAKWENALRQRVPIALVLAL PVERVTPAALPPSLAKPVPSGMGVNAWVCHGVKCLPEVTDLQELLRISEIRGKIRSLFYN
Sequences:
>Translated_700_residues MPNHLAGETSPYLLQHADNPVDWYPWGEEALTLARAQDRPILLSVGYSACHWCHVMAHECFEDAEVAEVMNRYFINIKVD REERPDIDQIYQTALYMLTQRSGGWPLTLFLTPDQKPFFGGTYFPKTPRHSLPGFLDLLPRVAETYRVRRPEIERQSASL LKSFANMLPSKAPEAPVFSERPLEQALAELKNRFDSENGGFGEPPKFLHLTELDFCLRRYFTAGNSEALHMATLTLEKMA EGGIYDQVGGGFYRYSTDKQWQIPHFEKMLYDNGPLLHLYADAWIASGNPLFARIVEETATWVMREMQPEYEENEKRTGA GYWSTLDADSENVEGKFYVWDRSEASHILSRREYVVAASHYGLSQPANFGNRYWHLAVAQSLPEIAENFGVTYAEARQWL ESGRKKLLAQRQCRVRPGRDEKILTSWNGLMIKGMARAGRVFGRDDWVRSAICAVDFIRSTLWKNGRLLATWKDGNARLN AYLDDYAFLLDGLLELMQTTFRPVDLDFAIALAEVLLDQFEDKEAGGFFFTSHDHENLIHRPKPGYDNATPSGNGVAAHT LQRMGYLLGEFRYLQAAERALRLFYPALLRHPDSCCSLLLALEQWLTPPPVVILRGKAEPMAKWENALRQRVPIALVLAL PVERVTPAALPPSLAKPVPSGMGVNAWVCHGVKCLPEVTDLQELLRISEIRGKIRSLFYN >Mature_699_residues PNHLAGETSPYLLQHADNPVDWYPWGEEALTLARAQDRPILLSVGYSACHWCHVMAHECFEDAEVAEVMNRYFINIKVDR EERPDIDQIYQTALYMLTQRSGGWPLTLFLTPDQKPFFGGTYFPKTPRHSLPGFLDLLPRVAETYRVRRPEIERQSASLL KSFANMLPSKAPEAPVFSERPLEQALAELKNRFDSENGGFGEPPKFLHLTELDFCLRRYFTAGNSEALHMATLTLEKMAE GGIYDQVGGGFYRYSTDKQWQIPHFEKMLYDNGPLLHLYADAWIASGNPLFARIVEETATWVMREMQPEYEENEKRTGAG YWSTLDADSENVEGKFYVWDRSEASHILSRREYVVAASHYGLSQPANFGNRYWHLAVAQSLPEIAENFGVTYAEARQWLE SGRKKLLAQRQCRVRPGRDEKILTSWNGLMIKGMARAGRVFGRDDWVRSAICAVDFIRSTLWKNGRLLATWKDGNARLNA YLDDYAFLLDGLLELMQTTFRPVDLDFAIALAEVLLDQFEDKEAGGFFFTSHDHENLIHRPKPGYDNATPSGNGVAAHTL QRMGYLLGEFRYLQAAERALRLFYPALLRHPDSCCSLLLALEQWLTPPPVVILRGKAEPMAKWENALRQRVPIALVLALP VERVTPAALPPSLAKPVPSGMGVNAWVCHGVKCLPEVTDLQELLRISEIRGKIRSLFYN
Specific function: Unknown
COG id: COG1331
COG function: function code O; Highly conserved protein containing a thioredoxin domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To C.elegans B0495.5 [H]
Homologues:
Organism=Homo sapiens, GI31542723, Length=746, Percent_Identity=34.8525469168901, Blast_Score=373, Evalue=1e-103, Organism=Caenorhabditis elegans, GI25147430, Length=721, Percent_Identity=32.0388349514563, Blast_Score=362, Evalue=1e-100, Organism=Drosophila melanogaster, GI20129985, Length=732, Percent_Identity=33.879781420765, Blast_Score=397, Evalue=1e-110,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR010819 - InterPro: IPR004879 - InterPro: IPR005198 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF03190 DUF255; PF07221 GlcNAc_2-epim; PF03663 Glyco_hydro_76 [H]
EC number: NA
Molecular weight: Translated: 79667; Mature: 79536
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNHLAGETSPYLLQHADNPVDWYPWGEEALTLARAQDRPILLSVGYSACHWCHVMAHEC CCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHH FEDAEVAEVMNRYFINIKVDREERPDIDQIYQTALYMLTQRSGGWPLTLFLTPDQKPFFG HCHHHHHHHHHCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCC GTYFPKTPRHSLPGFLDLLPRVAETYRVRRPEIERQSASLLKSFANMLPSKAPEAPVFSE CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC RPLEQALAELKNRFDSENGGFGEPPKFLHLTELDFCLRRYFTAGNSEALHMATLTLEKMA CCHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHH EGGIYDQVGGGFYRYSTDKQWQIPHFEKMLYDNGPLLHLYADAWIASGNPLFARIVEETA CCCCCHHCCCCEEEECCCCCCCCCHHHHHHHCCCCEEEEEECCEEECCCHHHHHHHHHHH TWVMREMQPEYEENEKRTGAGYWSTLDADSENVEGKFYVWDRSEASHILSRREYVVAASH HHHHHHHCCCHHHCCCCCCCCCCEECCCCCCCCCCEEEEECCCHHHHHHHHHHEEEEECC YGLSQPANFGNRYWHLAVAQSLPEIAENFGVTYAEARQWLESGRKKLLAQRQCRVRPGRD CCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC EKILTSWNGLMIKGMARAGRVFGRDDWVRSAICAVDFIRSTLWKNGRLLATWKDGNARLN CEEEECCCCEEEECHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEE AYLDDYAFLLDGLLELMQTTFRPVDLDFAIALAEVLLDQFEDKEAGGFFFTSHDHENLIH HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCC RPKPGYDNATPSGNGVAAHTLQRMGYLLGEFRYLQAAERALRLFYPALLRHPDSCCSLLL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH ALEQWLTPPPVVILRGKAEPMAKWENALRQRVPIALVLALPVERVTPAALPPSLAKPVPS HHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCEEEEEECCHHHCCCCCCCCHHHCCCCC GMGVNAWVCHGVKCLPEVTDLQELLRISEIRGKIRSLFYN CCCCCHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PNHLAGETSPYLLQHADNPVDWYPWGEEALTLARAQDRPILLSVGYSACHWCHVMAHEC CCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHH FEDAEVAEVMNRYFINIKVDREERPDIDQIYQTALYMLTQRSGGWPLTLFLTPDQKPFFG HCHHHHHHHHHCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCC GTYFPKTPRHSLPGFLDLLPRVAETYRVRRPEIERQSASLLKSFANMLPSKAPEAPVFSE CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC RPLEQALAELKNRFDSENGGFGEPPKFLHLTELDFCLRRYFTAGNSEALHMATLTLEKMA CCHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHH EGGIYDQVGGGFYRYSTDKQWQIPHFEKMLYDNGPLLHLYADAWIASGNPLFARIVEETA CCCCCHHCCCCEEEECCCCCCCCCHHHHHHHCCCCEEEEEECCEEECCCHHHHHHHHHHH TWVMREMQPEYEENEKRTGAGYWSTLDADSENVEGKFYVWDRSEASHILSRREYVVAASH HHHHHHHCCCHHHCCCCCCCCCCEECCCCCCCCCCEEEEECCCHHHHHHHHHHEEEEECC YGLSQPANFGNRYWHLAVAQSLPEIAENFGVTYAEARQWLESGRKKLLAQRQCRVRPGRD CCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC EKILTSWNGLMIKGMARAGRVFGRDDWVRSAICAVDFIRSTLWKNGRLLATWKDGNARLN CEEEECCCCEEEECHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEE AYLDDYAFLLDGLLELMQTTFRPVDLDFAIALAEVLLDQFEDKEAGGFFFTSHDHENLIH HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCC RPKPGYDNATPSGNGVAAHTLQRMGYLLGEFRYLQAAERALRLFYPALLRHPDSCCSLLL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH ALEQWLTPPPVVILRGKAEPMAKWENALRQRVPIALVLALPVERVTPAALPPSLAKPVPS HHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCEEEEEECCHHHCCCCCCCCHHHCCCCC GMGVNAWVCHGVKCLPEVTDLQELLRISEIRGKIRSLFYN CCCCCHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]