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The map label for this gene is ycbC [C]

Identifier: 82701477

GI number: 82701477

Start: 374738

End: 375493

Strand: Reverse

Name: ycbC [C]

Synonym: Nmul_A0343

Alternate gene names: 82701477

Gene position: 375493-374738 (Counterclockwise)

Preceding gene: 82701478

Following gene: 82701476

Centisome position: 11.79

GC content: 55.29

Gene sequence:

>756_bases
ATGAGCTGGTTTGCAACCAACTTCGCAAGCGCATTTCTTCTCCCCCCGTTTAACCTCATTTTACTGGGCGCCGCGGGCAT
CCTGCTCCTGAAACGCCGACAGGGAACAGGTATGACATTGGTGGCTGCTGCACTTGCTCTGCTTTACCTTCTTTCCACTC
CGATCGTCGCGGACGCCCTGTTGCAGGTACTGGAAACCCCTTCCGAAAAGAATCCGTTTGACGACACGATACAAGCCATC
ATCGTGCTGGGCGGAGGAACTTACTATTACGCGCCGGAGTATGGCGATCATACGGTTGGCAGATACACACTGGAACGTGT
CCGCTATGCGGCGAAAATATATCGCCTGACTGGCAAGCCTATACTGACCGCAGGGGGCGCTCCTCTTGGTAATCACTCCT
CCGAAGCCATGCAAATGAAGGCGGTGCTGGAAGAGGAGTTTCTCGTTCCGGTCGAGTGGGTAGAGGAGACATCGAGCAAT
ACTCGGGAAAACGCCTACAAAAGCTTCGCCATCCTGCAAAAACAAGGTATCCGCCAGATCGCGCTTGTCACCCACGCATG
GCACATGCCGAGAGCGGCGCGCGAATTCGAACAGGCGGGATTCGAGGTTACGCCTGCTGCCACAGGATACACGCGGCGTT
ACAAGACCGATCTGCTCACATTCATTCCAAACGCCGGGGCGCTTCTCAAAAGCAGCCTGTTCTTCCACGAGGTCATTGGC
ATATTGTGGTACCGCCTGATGCCTGAGCCGGATTGA

Upstream 100 bases:

>100_bases
GGCAAAGTGGATTTTGACCCAATAAGCCCGGGTCCGCTAAAAAAGCCGGCAAGTGCCGGCTTTTTTATTTTGGCTGCCCC
TGCCAAAAGTACATGAGTAC

Downstream 100 bases:

>100_bases
GGGGCATTACACTCGGCATGGCTGGAAGTCGCTAGAATAGCGTAATCGAATTCTCTGGAGAGGAGCGGCATGAAAGCAAG
CGTCAAATGGCAGGAAGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MSWFATNFASAFLLPPFNLILLGAAGILLLKRRQGTGMTLVAAALALLYLLSTPIVADALLQVLETPSEKNPFDDTIQAI
IVLGGGTYYYAPEYGDHTVGRYTLERVRYAAKIYRLTGKPILTAGGAPLGNHSSEAMQMKAVLEEEFLVPVEWVEETSSN
TRENAYKSFAILQKQGIRQIALVTHAWHMPRAAREFEQAGFEVTPAATGYTRRYKTDLLTFIPNAGALLKSSLFFHEVIG
ILWYRLMPEPD

Sequences:

>Translated_251_residues
MSWFATNFASAFLLPPFNLILLGAAGILLLKRRQGTGMTLVAAALALLYLLSTPIVADALLQVLETPSEKNPFDDTIQAI
IVLGGGTYYYAPEYGDHTVGRYTLERVRYAAKIYRLTGKPILTAGGAPLGNHSSEAMQMKAVLEEEFLVPVEWVEETSSN
TRENAYKSFAILQKQGIRQIALVTHAWHMPRAAREFEQAGFEVTPAATGYTRRYKTDLLTFIPNAGALLKSSLFFHEVIG
ILWYRLMPEPD
>Mature_250_residues
SWFATNFASAFLLPPFNLILLGAAGILLLKRRQGTGMTLVAAALALLYLLSTPIVADALLQVLETPSEKNPFDDTIQAII
VLGGGTYYYAPEYGDHTVGRYTLERVRYAAKIYRLTGKPILTAGGAPLGNHSSEAMQMKAVLEEEFLVPVEWVEETSSNT
RENAYKSFAILQKQGIRQIALVTHAWHMPRAAREFEQAGFEVTPAATGYTRRYKTDLLTFIPNAGALLKSSLFFHEVIGI
LWYRLMPEPD

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003848
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02698 DUF218 [H]

EC number: NA

Molecular weight: Translated: 27859; Mature: 27727

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWFATNFASAFLLPPFNLILLGAAGILLLKRRQGTGMTLVAAALALLYLLSTPIVADAL
CCCCHHHHHHHHHCCCHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHCHHHHHHH
LQVLETPSEKNPFDDTIQAIIVLGGGTYYYAPEYGDHTVGRYTLERVRYAAKIYRLTGKP
HHHHHCCCCCCCHHHHHHEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCE
ILTAGGAPLGNHSSEAMQMKAVLEEEFLVPVEWVEETSSNTRENAYKSFAILQKQGIRQI
EEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHH
ALVTHAWHMPRAAREFEQAGFEVTPAATGYTRRYKTDLLTFIPNAGALLKSSLFFHEVIG
HHHHHHHHCCHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
ILWYRLMPEPD
HHHHHHCCCCC
>Mature Secondary Structure 
SWFATNFASAFLLPPFNLILLGAAGILLLKRRQGTGMTLVAAALALLYLLSTPIVADAL
CCCHHHHHHHHHCCCHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHCHHHHHHH
LQVLETPSEKNPFDDTIQAIIVLGGGTYYYAPEYGDHTVGRYTLERVRYAAKIYRLTGKP
HHHHHCCCCCCCHHHHHHEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCE
ILTAGGAPLGNHSSEAMQMKAVLEEEFLVPVEWVEETSSNTRENAYKSFAILQKQGIRQI
EEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHH
ALVTHAWHMPRAAREFEQAGFEVTPAATGYTRRYKTDLLTFIPNAGALLKSSLFFHEVIG
HHHHHHHHCCHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
ILWYRLMPEPD
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]