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The map label for this gene is glcF [H]

Identifier: 82701473

GI number: 82701473

Start: 370876

End: 372258

Strand: Direct

Name: glcF [H]

Synonym: Nmul_A0339

Alternate gene names: 82701473

Gene position: 370876-372258 (Clockwise)

Preceding gene: 82701472

Following gene: 82701475

Centisome position: 11.65

GC content: 58.71

Gene sequence:

>1383_bases
ATGAAGCCGGATGACCTTCCTTCCGATGTTTCTTCGGATCCATTACTGCGATTGCGCCGCCAAATAAGCGACGAGGCCAG
CCAGTGCGTTGCGTGCGGCCTTTGCGTGCCGCATTGTCCCAGTTATCGGGTTACCCTGTCGGAAGCTGATTCCCCGCGTG
GTCGCATTGCGTTGATGAGTGGCGTAGCCGCGGGACGCATTCCAATGAACGCACGTTTCGCATTGCACATGGATCGCTGC
CTTACCTGCCGTGCCTGCGAAGCCGTCTGCCCCAACCACGTACGTTTTGGCGAGTTGATAGACGACGCCCGGGAGATGAT
TTCGTCACCGCCGCTCGAGTTCGGGGGGAACAATCCGGGAGCCCGGGTATCCAGCTTTCGGAAATGGGTGGAGCGTGAGC
TGATCGCCAGGCCCTCGCGTATCGATGCATTGCGGCCGCTTCTGCGTTTTTACCAGCGAAGCGGTTTGCAGAAATGGGTA
CGAAAATCCGGTTTGCTGGGCAAGACGAAACTCGCCTTGCTGGAAGCCCAGATTCCATTTATTGACCAGCCCCGTTCTTC
GTCATGGTCGGTTGTTTATCCTGCTGTGGGCAAGCCGCGCGGAGAGGTGGGGCTGTTCCTGGGTTGCGTCGCGCGCGTGG
CGGATGCAACCACCCTGGACGCGGCCTTGTTCGTACTCAACCAACTGGGCTATGTCGTGCATGTGCCCACGGGGCAGACT
TGCTGCGGAGCGCTTCACCAGCACAGGGGCGATATGGACGCGGCAGCGCAACTGGAACGTCAGAACGTGGAGGCGTTCGC
TGGATTGGACTTGGGCGCGATCATCACCACGGCATCCGGATGCGGTGCGCAGTTATCCGAATATTCCTCTTTTTCCGGCT
CGCAGCGCACGACAAGGGCGCCCGCGGTAAGCTCACAAGCCGGAGGTGAGACAACCAGGCGATCGCCGCCGAAGGTCTTG
GATATCAGTGAATTCCTGGCGGAGGCGGAAGGATGGGAAGATGCCAGATTCCAGCCCCTGCCACACAAAATCCTGGTACA
TGAGCCTTGCACCTTGCGCAATGTATTACGCGCGTCGACATACGCCTATAAGCTGCTGGAGCGCATCCCGCAAGCGCAAG
TAGTACCTCTTGCCGGGAATGATCAATGCTGCGGCGCTGCCGGAACCTATTTCCTGGATCAACCGGAGATATCGGCGGCG
CTGCTTGAGGATAAAGTGACAGCTTTGAAAGCAGGGCAGGCGTGTTACCTTGCAACCTCCAACGTGGGCTGCGCGCTGCA
TATCGCTGCCGGCTTGCGCCGGCCAGGGCTGGGGATCGAAGTCATTCACCCGGTAACATTAATAGCAAGGCAAATGGGTA
TGCAATCCCAATCCCTGAAATAG

Upstream 100 bases:

>100_bases
AAGGGTGGGCGTGTGAATATTGGCACGCATCTTCTTTTCATTCTCCCCGGTAAAATTTTTTTGAATTTGAACGGCTCTGA
CAAAAGCAGGTCTACTGTCC

Downstream 100 bases:

>100_bases
CTTTATCGTGCGACTCAGCAAAGCAGGGGCGCAGACACGTTCAGAGTTTGATTTTCCCTATCCCCTGTAAAAGTCCTGGA
AGTGCCTGGCTCTGCCACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 460

Protein sequence:

>460_residues
MKPDDLPSDVSSDPLLRLRRQISDEASQCVACGLCVPHCPSYRVTLSEADSPRGRIALMSGVAAGRIPMNARFALHMDRC
LTCRACEAVCPNHVRFGELIDDAREMISSPPLEFGGNNPGARVSSFRKWVERELIARPSRIDALRPLLRFYQRSGLQKWV
RKSGLLGKTKLALLEAQIPFIDQPRSSSWSVVYPAVGKPRGEVGLFLGCVARVADATTLDAALFVLNQLGYVVHVPTGQT
CCGALHQHRGDMDAAAQLERQNVEAFAGLDLGAIITTASGCGAQLSEYSSFSGSQRTTRAPAVSSQAGGETTRRSPPKVL
DISEFLAEAEGWEDARFQPLPHKILVHEPCTLRNVLRASTYAYKLLERIPQAQVVPLAGNDQCCGAAGTYFLDQPEISAA
LLEDKVTALKAGQACYLATSNVGCALHIAAGLRRPGLGIEVIHPVTLIARQMGMQSQSLK

Sequences:

>Translated_460_residues
MKPDDLPSDVSSDPLLRLRRQISDEASQCVACGLCVPHCPSYRVTLSEADSPRGRIALMSGVAAGRIPMNARFALHMDRC
LTCRACEAVCPNHVRFGELIDDAREMISSPPLEFGGNNPGARVSSFRKWVERELIARPSRIDALRPLLRFYQRSGLQKWV
RKSGLLGKTKLALLEAQIPFIDQPRSSSWSVVYPAVGKPRGEVGLFLGCVARVADATTLDAALFVLNQLGYVVHVPTGQT
CCGALHQHRGDMDAAAQLERQNVEAFAGLDLGAIITTASGCGAQLSEYSSFSGSQRTTRAPAVSSQAGGETTRRSPPKVL
DISEFLAEAEGWEDARFQPLPHKILVHEPCTLRNVLRASTYAYKLLERIPQAQVVPLAGNDQCCGAAGTYFLDQPEISAA
LLEDKVTALKAGQACYLATSNVGCALHIAAGLRRPGLGIEVIHPVTLIARQMGMQSQSLK
>Mature_460_residues
MKPDDLPSDVSSDPLLRLRRQISDEASQCVACGLCVPHCPSYRVTLSEADSPRGRIALMSGVAAGRIPMNARFALHMDRC
LTCRACEAVCPNHVRFGELIDDAREMISSPPLEFGGNNPGARVSSFRKWVERELIARPSRIDALRPLLRFYQRSGLQKWV
RKSGLLGKTKLALLEAQIPFIDQPRSSSWSVVYPAVGKPRGEVGLFLGCVARVADATTLDAALFVLNQLGYVVHVPTGQT
CCGALHQHRGDMDAAAQLERQNVEAFAGLDLGAIITTASGCGAQLSEYSSFSGSQRTTRAPAVSSQAGGETTRRSPPKVL
DISEFLAEAEGWEDARFQPLPHKILVHEPCTLRNVLRASTYAYKLLERIPQAQVVPLAGNDQCCGAAGTYFLDQPEISAA
LLEDKVTALKAGQACYLATSNVGCALHIAAGLRRPGLGIEVIHPVTLIARQMGMQSQSLK

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI48994913, Length=416, Percent_Identity=29.0865384615385, Blast_Score=146, Evalue=3e-36,
Organism=Escherichia coli, GI1786497, Length=242, Percent_Identity=24.7933884297521, Blast_Score=79, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR012257 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 49726; Mature: 49726

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPDDLPSDVSSDPLLRLRRQISDEASQCVACGLCVPHCPSYRVTLSEADSPRGRIALMS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCEEEEE
GVAAGRIPMNARFALHMDRCLTCRACEAVCPNHVRFGELIDDAREMISSPPLEFGGNNPG
CCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
ARVSSFRKWVERELIARPSRIDALRPLLRFYQRSGLQKWVRKSGLLGKTKLALLEAQIPF
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC
IDQPRSSSWSVVYPAVGKPRGEVGLFLGCVARVADATTLDAALFVLNQLGYVVHVPTGQT
CCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCEEECCCCHH
CCGALHQHRGDMDAAAQLERQNVEAFAGLDLGAIITTASGCGAQLSEYSSFSGSQRTTRA
HHHHHHHHCCCHHHHHHHHHHCHHHHHCCCHHHHHEECCCCCHHHHHHHCCCCCCCCCCC
PAVSSQAGGETTRRSPPKVLDISEFLAEAEGWEDARFQPLPHKILVHEPCTLRNVLRAST
CCCCCCCCCCCCCCCCCCEECHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHH
YAYKLLERIPQAQVVPLAGNDQCCGAAGTYFLDQPEISAALLEDKVTALKAGQACYLATS
HHHHHHHHCCCCEEEEECCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCEEEEEEC
NVGCALHIAAGLRRPGLGIEVIHPVTLIARQMGMQSQSLK
CCCEEEEEECCCCCCCCCEEHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKPDDLPSDVSSDPLLRLRRQISDEASQCVACGLCVPHCPSYRVTLSEADSPRGRIALMS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCEEEEE
GVAAGRIPMNARFALHMDRCLTCRACEAVCPNHVRFGELIDDAREMISSPPLEFGGNNPG
CCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
ARVSSFRKWVERELIARPSRIDALRPLLRFYQRSGLQKWVRKSGLLGKTKLALLEAQIPF
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC
IDQPRSSSWSVVYPAVGKPRGEVGLFLGCVARVADATTLDAALFVLNQLGYVVHVPTGQT
CCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCEEECCCCHH
CCGALHQHRGDMDAAAQLERQNVEAFAGLDLGAIITTASGCGAQLSEYSSFSGSQRTTRA
HHHHHHHHCCCHHHHHHHHHHCHHHHHCCCHHHHHEECCCCCHHHHHHHCCCCCCCCCCC
PAVSSQAGGETTRRSPPKVLDISEFLAEAEGWEDARFQPLPHKILVHEPCTLRNVLRAST
CCCCCCCCCCCCCCCCCCEECHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHH
YAYKLLERIPQAQVVPLAGNDQCCGAAGTYFLDQPEISAALLEDKVTALKAGQACYLATS
HHHHHHHHCCCCEEEEECCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCEEEEEEC
NVGCALHIAAGLRRPGLGIEVIHPVTLIARQMGMQSQSLK
CCCEEEEEECCCCCCCCCEEHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]