| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
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The map label for this gene is yhcV [H]
Identifier: 82701472
GI number: 82701472
Start: 370170
End: 370613
Strand: Direct
Name: yhcV [H]
Synonym: Nmul_A0338
Alternate gene names: 82701472
Gene position: 370170-370613 (Clockwise)
Preceding gene: 82701471
Following gene: 82701473
Centisome position: 11.63
GC content: 54.5
Gene sequence:
>444_bases ATGACGACCGTAAAGGAATTGCTGGAAGGCAAAGGGTACGAAGTCGCGAGCATCGAGCCGGATAAATCGGTCTATGAGGC CATGCACCTGATGGCGGCGAAAAATATCGGTGCGTTGCTGGTGCTGCACCGGGGAAAACTGGTGGGTATTTTTACCGAGA GAGATTATTCCCGCAAGGCATATAGCCTGGATCGGCTCGCGAAAGATATCCAGGTGAAAGAACTCATGACCGCGCAGGTG GCGTATGTGAGCCCGGATTATTCCACCGAGGATTGCATGGCATTGGTGACTAAGACGCGGGCGCGCCACTTGCCCGTGCT GGCGAATGGTAAAGTCATGGGCATCATCTCCATCGGCGACCTGGTCAAGGATGCGATCTCGGGCCGCGAATTTATAATCG ACCAGCTCGAGCGCTATATATACGGGACACGCAGCCCGGAATAA
Upstream 100 bases:
>100_bases TTCACATCGCTCCCGGCTTTTCTTTTCATATGACATGCTATGATTGGATGAGTCCGATAAAGGTATTGCATGCTTTGAAA CCGAGGGGGAGGGTTGATCC
Downstream 100 bases:
>100_bases GCCTATTGTACTACCCCTTGATATTATCTCCCTGTATTCCGCGATCAGGTCCGGGAGGCTCTGCCTCGATGAAACACTGC TCCCTATCCGGTCGGCAGGT
Product: signal-transduction protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MTTVKELLEGKGYEVASIEPDKSVYEAMHLMAAKNIGALLVLHRGKLVGIFTERDYSRKAYSLDRLAKDIQVKELMTAQV AYVSPDYSTEDCMALVTKTRARHLPVLANGKVMGIISIGDLVKDAISGREFIIDQLERYIYGTRSPE
Sequences:
>Translated_147_residues MTTVKELLEGKGYEVASIEPDKSVYEAMHLMAAKNIGALLVLHRGKLVGIFTERDYSRKAYSLDRLAKDIQVKELMTAQV AYVSPDYSTEDCMALVTKTRARHLPVLANGKVMGIISIGDLVKDAISGREFIIDQLERYIYGTRSPE >Mature_146_residues TTVKELLEGKGYEVASIEPDKSVYEAMHLMAAKNIGALLVLHRGKLVGIFTERDYSRKAYSLDRLAKDIQVKELMTAQVA YVSPDYSTEDCMALVTKTRARHLPVLANGKVMGIISIGDLVKDAISGREFIIDQLERYIYGTRSPE
Specific function: Unknown
COG id: COG0517
COG function: function code R; FOG: CBS domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 [H]
Pfam domain/function: PF00571 CBS [H]
EC number: NA
Molecular weight: Translated: 16411; Mature: 16280
Theoretical pI: Translated: 7.59; Mature: 7.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTVKELLEGKGYEVASIEPDKSVYEAMHLMAAKNIGALLVLHRGKLVGIFTERDYSRKA CCCHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCHHH YSLDRLAKDIQVKELMTAQVAYVSPDYSTEDCMALVTKTRARHLPVLANGKVMGIISIGD HHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCCCEEECCCEEEEEEHHH LVKDAISGREFIIDQLERYIYGTRSPE HHHHHHCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TTVKELLEGKGYEVASIEPDKSVYEAMHLMAAKNIGALLVLHRGKLVGIFTERDYSRKA CCHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCHHH YSLDRLAKDIQVKELMTAQVAYVSPDYSTEDCMALVTKTRARHLPVLANGKVMGIISIGD HHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCCCEEECCCEEEEEEHHH LVKDAISGREFIIDQLERYIYGTRSPE HHHHHHCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969498; 9384377 [H]