| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
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The map label for this gene is wzxC [C]
Identifier: 82701382
GI number: 82701382
Start: 264728
End: 266191
Strand: Direct
Name: wzxC [C]
Synonym: Nmul_A0248
Alternate gene names: 82701382
Gene position: 264728-266191 (Clockwise)
Preceding gene: 82701381
Following gene: 82701383
Centisome position: 8.31
GC content: 47.68
Gene sequence:
>1464_bases ATGAGTTTAGCAGTCAAGAGCTTAAGCGCGGTCAAGAGTAGCTACGCCGGAACGATCATTCGGATCGGCGCGCAGTTTGG TGCTCAGATTTTAATCATGCGTCAACTCGATCCAGAATTAGTCGGCGCATTCGGATATGTGCTGTTGCTCCATGGTATCT TGGCCTTGATTATCGACCAAGGTTATGGATGGTCTCTAATACAAGGACACTTTAACGACAAGCGCGAAATCGCCATTGTT TTTTCCAGAATCATGCTTTTATCATTTATTGGCATGCTCTGTGTTTTCGCAATTTCTTACCCTGCCGCGGATTATCTGGA GAATGAGCTTGTCGGATCTATGTTCAGATATTCGGCCCCATCGTGTCTCTTCATAGGATTCTTCAGTATCTCACAGGCTG CATTGAGAGCAGAGCTCAGGTTTCGGGAGATTCAAATAGCAACTACCGGCGCGTACCTGATCGCGTATCCCATTGTAGGG GTCACGATGGCTCTAGGCGGGTTCGGGGTTTGGTCTCTGGTAGCTGCATGGTATGTACATTATATTCTCCAGGTTGTTAT TGGTCACTATTACAGCCCTCATTCTCTAAAGCTTGCAAATCCTTTCCTGCCAACCAAGAGTGGCCCGATGGGTCGTCAGG TGGCTGGAATCAATGTTTTGAACTGGGCTGTAGACAATACCGGAGGCGTGTTCATCGGAGGCCTGGGCGCCTCCGCATTA GGGAATTTCAATGCCGCCATGATGCTGGCGCGCACTCCTGCACTTCATGCAGTCCAAACATTGCAATCGATCCTCTTTTC CACCGCTTCTGCAATCGGTGCTGATCAGCAACGAATAAAGCGCCTTTACCTAGCCGTGCTGGCGGCAGTCAGTTTTATCG TTTTTCCGACATATGGATACACCTTCACACATGCAGAGTTAGTGATCAAGATAGTGTTCGGGAGTAAATGGCTTGATGCC GCAGATATTTTTTCCGCTCTATCCATAGGAATGATTGCATTCTCGTTGAGTTTGCTTTCAGGGGCGATTCTTACCGCAAC CGGGGATCAGAAAACGGTACTTTATTCACAGATGGCTTGCTTGATGGTCATGATCTTCGGTTTGTCTCTCACCATAAATG TCAGTCTTGTCTATGTTGGACTTGCCATTACCGTGGCGTATACGGTCAGACTCTCTTTACAGTTGAAAGCAATCGCGGTG AGGGGCGGGATCACGCTGAAAGAATTCCTCGCGACACTAAGAGGGCCCTTTTTTGTCGCTATCATTATGGCTATGCCGGT TACCTTATTCGGTGACTCTACGCTTGAGGTTATTCCAACTGAATTATTGGCGCTTGCCCTCAAAGGTCTCGTACTTTTGG TGCTGTTCAAGGTGTTTCCCAGTTTTTTCTTTAGTCTTGCCTCTATAGATCTGCTGAGCAGATTTCATGCAGGACGGCAA GTTGTCCATATGTTGGGTATCTGA
Upstream 100 bases:
>100_bases AATGCCGGTAATACAACGAAAGCGATTTTCAGGAACGTGATGACGCAGGGGTTAGCAGCTTTTTTCTGGTCATCTTCCGG GGCTGTTTGAAACAGCGGAT
Downstream 100 bases:
>100_bases AGCATGCGCCCCCGCCTACAAAATTTAACCGTTTGCGAGGCTTCCTCGTGCTGACAGTCATTATTCTTTCGATAGCTGTC TTTGTTTTTGCGCTTGGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: Capsular Polysaccharide Transporter; Polysaccharide Biosynthesis Export Protein; O-Antigen Flippase; Polysaccharide Export Protein; Polysaccharide Transporter; Colanic Acid Exporter; Polysaccharide Transporter/Flippase; Virulence Factor MVIN Superfamily
Number of amino acids: Translated: 487; Mature: 486
Protein sequence:
>487_residues MSLAVKSLSAVKSSYAGTIIRIGAQFGAQILIMRQLDPELVGAFGYVLLLHGILALIIDQGYGWSLIQGHFNDKREIAIV FSRIMLLSFIGMLCVFAISYPAADYLENELVGSMFRYSAPSCLFIGFFSISQAALRAELRFREIQIATTGAYLIAYPIVG VTMALGGFGVWSLVAAWYVHYILQVVIGHYYSPHSLKLANPFLPTKSGPMGRQVAGINVLNWAVDNTGGVFIGGLGASAL GNFNAAMMLARTPALHAVQTLQSILFSTASAIGADQQRIKRLYLAVLAAVSFIVFPTYGYTFTHAELVIKIVFGSKWLDA ADIFSALSIGMIAFSLSLLSGAILTATGDQKTVLYSQMACLMVMIFGLSLTINVSLVYVGLAITVAYTVRLSLQLKAIAV RGGITLKEFLATLRGPFFVAIIMAMPVTLFGDSTLEVIPTELLALALKGLVLLVLFKVFPSFFFSLASIDLLSRFHAGRQ VVHMLGI
Sequences:
>Translated_487_residues MSLAVKSLSAVKSSYAGTIIRIGAQFGAQILIMRQLDPELVGAFGYVLLLHGILALIIDQGYGWSLIQGHFNDKREIAIV FSRIMLLSFIGMLCVFAISYPAADYLENELVGSMFRYSAPSCLFIGFFSISQAALRAELRFREIQIATTGAYLIAYPIVG VTMALGGFGVWSLVAAWYVHYILQVVIGHYYSPHSLKLANPFLPTKSGPMGRQVAGINVLNWAVDNTGGVFIGGLGASAL GNFNAAMMLARTPALHAVQTLQSILFSTASAIGADQQRIKRLYLAVLAAVSFIVFPTYGYTFTHAELVIKIVFGSKWLDA ADIFSALSIGMIAFSLSLLSGAILTATGDQKTVLYSQMACLMVMIFGLSLTINVSLVYVGLAITVAYTVRLSLQLKAIAV RGGITLKEFLATLRGPFFVAIIMAMPVTLFGDSTLEVIPTELLALALKGLVLLVLFKVFPSFFFSLASIDLLSRFHAGRQ VVHMLGI >Mature_486_residues SLAVKSLSAVKSSYAGTIIRIGAQFGAQILIMRQLDPELVGAFGYVLLLHGILALIIDQGYGWSLIQGHFNDKREIAIVF SRIMLLSFIGMLCVFAISYPAADYLENELVGSMFRYSAPSCLFIGFFSISQAALRAELRFREIQIATTGAYLIAYPIVGV TMALGGFGVWSLVAAWYVHYILQVVIGHYYSPHSLKLANPFLPTKSGPMGRQVAGINVLNWAVDNTGGVFIGGLGASALG NFNAAMMLARTPALHAVQTLQSILFSTASAIGADQQRIKRLYLAVLAAVSFIVFPTYGYTFTHAELVIKIVFGSKWLDAA DIFSALSIGMIAFSLSLLSGAILTATGDQKTVLYSQMACLMVMIFGLSLTINVSLVYVGLAITVAYTVRLSLQLKAIAVR GGITLKEFLATLRGPFFVAIIMAMPVTLFGDSTLEVIPTELLALALKGLVLLVLFKVFPSFFFSLASIDLLSRFHAGRQV VHMLGI
Specific function: Lipopolysaccharide biosynthesis. [C]
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52593; Mature: 52462
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLAVKSLSAVKSSYAGTIIRIGAQFGAQILIMRQLDPELVGAFGYVLLLHGILALIIDQ CCCHHHHHHHHHHHHCCCEEEEEHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCC GYGWSLIQGHFNDKREIAIVFSRIMLLSFIGMLCVFAISYPAADYLENELVGSMFRYSAP CCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC SCLFIGFFSISQAALRAELRFREIQIATTGAYLIAYPIVGVTMALGGFGVWSLVAAWYVH CEEEEHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH YILQVVIGHYYSPHSLKLANPFLPTKSGPMGRQVAGINVLNWAVDNTGGVFIGGLGASAL HHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCEEECCEEEEEEECCCCCEEEECCCHHHH GNFNAAMMLARTPALHAVQTLQSILFSTASAIGADQQRIKRLYLAVLAAVSFIVFPTYGY CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC TFTHAELVIKIVFGSKWLDAADIFSALSIGMIAFSLSLLSGAILTATGDQKTVLYSQMAC EEEHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHH LMVMIFGLSLTINVSLVYVGLAITVAYTVRLSLQLKAIAVRGGITLKEFLATLRGPFFVA HHHHHHHHHHEEEHHHHHHHHHHHHHHHHEEEEEEEEEEEECCCCHHHHHHHHCCHHHHH IIMAMPVTLFGDSTLEVIPTELLALALKGLVLLVLFKVFPSFFFSLASIDLLSRFHAGRQ HHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVHMLGI HHHHHCC >Mature Secondary Structure SLAVKSLSAVKSSYAGTIIRIGAQFGAQILIMRQLDPELVGAFGYVLLLHGILALIIDQ CCHHHHHHHHHHHHCCCEEEEEHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCC GYGWSLIQGHFNDKREIAIVFSRIMLLSFIGMLCVFAISYPAADYLENELVGSMFRYSAP CCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC SCLFIGFFSISQAALRAELRFREIQIATTGAYLIAYPIVGVTMALGGFGVWSLVAAWYVH CEEEEHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH YILQVVIGHYYSPHSLKLANPFLPTKSGPMGRQVAGINVLNWAVDNTGGVFIGGLGASAL HHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCEEECCEEEEEEECCCCCEEEECCCHHHH GNFNAAMMLARTPALHAVQTLQSILFSTASAIGADQQRIKRLYLAVLAAVSFIVFPTYGY CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC TFTHAELVIKIVFGSKWLDAADIFSALSIGMIAFSLSLLSGAILTATGDQKTVLYSQMAC EEEHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHH LMVMIFGLSLTINVSLVYVGLAITVAYTVRLSLQLKAIAVRGGITLKEFLATLRGPFFVA HHHHHHHHHHEEEHHHHHHHHHHHHHHHHEEEEEEEEEEEECCCCHHHHHHHHCCHHHHH IIMAMPVTLFGDSTLEVIPTELLALALKGLVLLVLFKVFPSFFFSLASIDLLSRFHAGRQ HHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVHMLGI HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA