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The map label for this gene is xseB [H]

Identifier: 82701368

GI number: 82701368

Start: 249074

End: 249328

Strand: Direct

Name: xseB [H]

Synonym: Nmul_A0234

Alternate gene names: 82701368

Gene position: 249074-249328 (Clockwise)

Preceding gene: 82701361

Following gene: 82701369

Centisome position: 7.82

GC content: 52.16

Gene sequence:

>255_bases
ATGACAAAGCCCGTCGACCCCGTCAAATTTTCCCCTCCGGAAGGTTTTGAAGCTGCGCTGGCTGAGCTGGAAAGCATCGT
TCTGGAAATGGAAGCAGGGCAGATGCCGCTTGAAGAATCCCTCGAAGCTCACAAACGTGGGACGGAATTGCTACAATATT
GCCACTCCAAGTTGCAGGATGCTCAGCAGCAGGTACGCCTCCTTGAAGCCAACACACTGAAAAATTTCTCCCCTTCCGGT
ATTGATGACCGCTGA

Upstream 100 bases:

>100_bases
TTTCGTGGGAAAGTTTCGTGTATTTAATTGACCTGACACCACTTATTGCGTTATTTTTGCCGTTTGCCCGCGATACACCC
ATTCTGACAGCGTGTTTATC

Downstream 100 bases:

>100_bases
TTTCCAGGATTGGGCGAGAAGCCACCAGGTACGCATCGAAAATTCCCTGCAGACCCTGCTTCCCGCCGCAGACGTCGCGC
CTGAGCGCTTGCATGAAGCG

Product: exodeoxyribonuclease VII small subunit

Products: NA

Alternate protein names: Exodeoxyribonuclease VII small subunit; Exonuclease VII small subunit [H]

Number of amino acids: Translated: 84; Mature: 83

Protein sequence:

>84_residues
MTKPVDPVKFSPPEGFEAALAELESIVLEMEAGQMPLEESLEAHKRGTELLQYCHSKLQDAQQQVRLLEANTLKNFSPSG
IDDR

Sequences:

>Translated_84_residues
MTKPVDPVKFSPPEGFEAALAELESIVLEMEAGQMPLEESLEAHKRGTELLQYCHSKLQDAQQQVRLLEANTLKNFSPSG
IDDR
>Mature_83_residues
TKPVDPVKFSPPEGFEAALAELESIVLEMEAGQMPLEESLEAHKRGTELLQYCHSKLQDAQQQVRLLEANTLKNFSPSGI
DDR

Specific function: Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides [H]

COG id: COG1722

COG function: function code L; Exonuclease VII small subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xseB family [H]

Homologues:

Organism=Escherichia coli, GI1786624, Length=78, Percent_Identity=42.3076923076923, Blast_Score=59, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003761
- ProDom:   PD028235 [H]

Pfam domain/function: PF02609 Exonuc_VII_S [H]

EC number: =3.1.11.6 [H]

Molecular weight: Translated: 9383; Mature: 9252

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKPVDPVKFSPPEGFEAALAELESIVLEMEAGQMPLEESLEAHKRGTELLQYCHSKLQD
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AQQQVRLLEANTLKNFSPSGIDDR
HHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TKPVDPVKFSPPEGFEAALAELESIVLEMEAGQMPLEESLEAHKRGTELLQYCHSKLQD
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AQQQVRLLEANTLKNFSPSGIDDR
HHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12700255 [H]