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The map label for this gene is 82701339

Identifier: 82701339

GI number: 82701339

Start: 219119

End: 219676

Strand: Direct

Name: 82701339

Synonym: Nmul_A0205

Alternate gene names: NA

Gene position: 219119-219676 (Clockwise)

Preceding gene: 82701338

Following gene: 82701340

Centisome position: 6.88

GC content: 59.32

Gene sequence:

>558_bases
GTGAGCGACGTTGAAGACGAAGGGCATTCCACGCCTATCCAGACACCGGGTCAGTTGATTGTTGTTGTCCTGGCCGCTTT
CATAGTTCCAGTCGTTGTCTTATCATTGATCGGGCGGTTTGCCATCGGTGAAAGCTCCATGGATCCAAGCAGTCCCGCTT
TTTCGGAAGAAGCCGTAGCGAGGCGTCTTCATCCGGTAGGCAAGCTGGTGATTGCAGGCGATTCCACCCAGTCCGCAGCG
CAAACAGGGGAAGGCACAGTCGTGGCTGCGGCCCCTCCCGCAACTGCCAGCGCCGCTCCTGCGGCGGAAGACCCGGCGGA
AAAAGCCAAGAAAATTTACACCGCCAGTTGCTCCGCCTGTCATGCCACCGGCGCCGCCGGCGCACCCAAAGTGGGAGACA
ATGCAGCGTGGGCGCCCCGCATCAAGGCAGGTACGGAGACGCTTTATACCAGCGCATTGAAAGGCAAGAATGCCATGCCG
CCCAAAGGTGGAAACGCGGGGCTGTCTGATGACGACGTCAAGGCGGTGGTCGACTACATGGTCAGCCAGTCCAAATGA

Upstream 100 bases:

>100_bases
GCTTTTTAACCCCTCCGTCCAACCTGAATAAAACCGCTTTTGCTTGAATACATGAACCTATACAATAAACATTCTTAACG
TTTATTACTGGGGAGTTATT

Downstream 100 bases:

>100_bases
CCTGTTGGGAAGTTGAAGCCGGAGCGGGATGCGGCGGGCGATGGGGAGAATTTCATATCGCCCTTGTTTTTTCAAGATAA
CCGGTTCATTTCGTTGCCTT

Product: cytochrome c, class I

Products: NA

Alternate protein names: Cytochrome c555 [H]

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MSDVEDEGHSTPIQTPGQLIVVVLAAFIVPVVVLSLIGRFAIGESSMDPSSPAFSEEAVARRLHPVGKLVIAGDSTQSAA
QTGEGTVVAAAPPATASAAPAAEDPAEKAKKIYTASCSACHATGAAGAPKVGDNAAWAPRIKAGTETLYTSALKGKNAMP
PKGGNAGLSDDDVKAVVDYMVSQSK

Sequences:

>Translated_185_residues
MSDVEDEGHSTPIQTPGQLIVVVLAAFIVPVVVLSLIGRFAIGESSMDPSSPAFSEEAVARRLHPVGKLVIAGDSTQSAA
QTGEGTVVAAAPPATASAAPAAEDPAEKAKKIYTASCSACHATGAAGAPKVGDNAAWAPRIKAGTETLYTSALKGKNAMP
PKGGNAGLSDDDVKAVVDYMVSQSK
>Mature_184_residues
SDVEDEGHSTPIQTPGQLIVVVLAAFIVPVVVLSLIGRFAIGESSMDPSSPAFSEEAVARRLHPVGKLVIAGDSTQSAAQ
TGEGTVVAAAPPATASAAPAAEDPAEKAKKIYTASCSACHATGAAGAPKVGDNAAWAPRIKAGTETLYTSALKGKNAMPP
KGGNAGLSDDDVKAVVDYMVSQSK

Specific function: This basic c-type monoheme cytochrome has been found exclusively in the green photosynthetic bacteria, although its role in bacterial photosynthesis is not established. It has an unusually low redox potential compared with mitochondrial cytochrome c. It i

COG id: COG3245

COG function: function code C; Cytochrome c5

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR002323 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 18598; Mature: 18467

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDVEDEGHSTPIQTPGQLIVVVLAAFIVPVVVLSLIGRFAIGESSMDPSSPAFSEEAVA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
RRLHPVGKLVIAGDSTQSAAQTGEGTVVAAAPPATASAAPAAEDPAEKAKKIYTASCSAC
HHHHHHCEEEEECCCCHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCHH
HATGAAGAPKVGDNAAWAPRIKAGTETLYTSALKGKNAMPPKGGNAGLSDDDVKAVVDYM
HCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH
VSQSK
HHCCC
>Mature Secondary Structure 
SDVEDEGHSTPIQTPGQLIVVVLAAFIVPVVVLSLIGRFAIGESSMDPSSPAFSEEAVA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
RRLHPVGKLVIAGDSTQSAAQTGEGTVVAAAPPATASAAPAAEDPAEKAKKIYTASCSAC
HHHHHHCEEEEECCCCHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCHH
HATGAAGAPKVGDNAAWAPRIKAGTETLYTSALKGKNAMPPKGGNAGLSDDDVKAVVDYM
HCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH
VSQSK
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12093901 [H]