| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
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The map label for this gene is mnmG
Identifier: 162139859
GI number: 162139859
Start: 3175097
End: 3176995
Strand: Reverse
Name: mnmG
Synonym: Nmul_A2770
Alternate gene names: 162139859
Gene position: 3176995-3175097 (Counterclockwise)
Preceding gene: 82703886
Following gene: 82703882
Centisome position: 99.77
GC content: 56.19
Gene sequence:
>1899_bases ATGACTGTTCCTGAAATATTCGATGTAATAGTTATAGGTGGTGGCCACGCCGGTACCGAAGCGGCGCTCGCTGCCGCTCG CATTGGGCAAAAGACACTATTGCTATCACACAACATCGAAACCCTGGGGCAGATGTCGTGCAACCCTTCCATAGGCGGGA TCGGCAAAGGGCATCTGGTCAAAGAAATCGATGCGCTTGGGGGCGTGATGGCAGAGGCAGCGGATGAGGCGGGCATACAG TTTCGCATCCTCAACTCGCGCAAAGGACCTGCGGTACGCGCAACACGCGCCCAGGCTGATCGGGTCCTCTACCGCCAAGC GATCCGGCAGCGGTTGGAAAGTCAGCCGAATCTCTGGTTGTTTCAGCAAGGAGTGGACGATCTCGTGCTTGAGGGTGAGC GGGTGGCCGGGGTTGTCACACAGCTTGGAATCCGCTTTAACGCGCGTGCTGTAATTCTTACCGCTGGAACCTTCCTGGCA GGCCTGGCTCACGTAGGCTCGGCAAATTTTCAAGCCGGGCGGGCGGGGGACCTTCCATCCAATAGTCTTGCGGGACGCCT GCGCGAATTGAAGCTCCCTGTCGGGCGGTTGAAAACAGGAACCCCACCGCGGATAGATGGCCGTACCATCGATTATTCCG CTGTTGCCGCTCAACCCGGCGACGCGCCTGTGCCCGTTTTTTCCTTTATGGGCAATGCTGCTTCCCACCCGAAGCAGGTG TCTTGCTGGATCACGCATACCAACAGTCAGACGCACGATATTATTCGCAGCGGCCTGGATCGCTCCCCTCTATTCTCCGG TGCGATCGAGGGTATCGGACCTCGTTATTGTCCCTCTATCGAGGACAAGGTCGTGCGCTTTTCCGCCAAGGAATCGCATC AGATTTTTCTCGAACCGGAGGGTCTCACGACCCACGAGGTGTATCCCAACGGAATCTCCACGAGTCTCCCCTTCGATATG CAGGTGAAACTGGTGCGCTCAATCAAAGGATTGGAGAACGCCCATATCACCCGACCCGGTTATGCGATCGAATATGATTA TTTTGATCCGCGTGCCCTGAAAAGCTCGCTTGAAACCAGGATGATCGAAGGCCTGTTTTTCGCGGGACAGATCAATGGCA CCACGGGTTATGAAGAGGCCGCGGCGCAGGGGTTGCTTGCGGGAATCAACGCTGCGCTAAAAACGCAGGACAGGGAACCG TGGTGTCCGCGCCGGGATGAAGCCTATTTGGGCGTCCTGGTGGACGATCTCATTACCCGAGGTGTTACTGAACCCTATCG CATGTTCACCAGCCGTGCGGAATACCGGTTGCAATTGCGGGAGGATAACGCCGATCTCCGCCTCACCGAAGTCGGACGCA GGCTAGGGGTGGTGAATGACGCGCGCTGGGTGGCGTTCAATATCAAACTAGAGGCTATCGCTCAAGAGCAAAACCGGCTG AAGACCACGTGGCTCAGCCCGAAGAGTCTTTCCGAAACCGATGCATTACGTGTTATCGGGAAAAACATCGAGCATGAGTG TTCTCTGCATGACTTGTTGCGCCGGCCCAATGTGTCGTACGCCGAACTCATGACGCTGCCCGGTGCAGGCGAACCCGTTG TCGATCTTGCGGCGGCGGAGCAGGTCGAAATCCAGGCGAAGTATCAGGGATACATCGAGCGCCAGAAAGATGAAGTGGCG CGAAATGCTTATTATGAAGACATTCGCCTGCCGCAGGACCTGGATTACAAAACCGTGCGCGGTCTTTCGAATGAAGTTCA GCAGAAACTTAATCAGTTCAAGCCTGAAACGGCAGGACAGGCATCCCGTATCTCCGGAATCACGCCCGCCGCAATTTCGC TATTGCTGGTCCATGTCAAGCGCGGTTTTTCCAGCGCGAATACGAAGAAAAGCGCATGA
Upstream 100 bases:
>100_bases TTCTTCACCCAAGACCTCTTTATGATTCTTACATGGCTCCACGTTTTGCCGTAAAATGGGCACCACTCTCAATCGAATTC ATTTTTGCCCGATTGCTTCC
Downstream 100 bases:
>100_bases ATCCGGCTACACAACTGGCTGACGGAATCGCAACACTGGGACTATCTATTACCGAATCAAATCAGGCACGCCTCCTGCAA TATCTGGCGCTCATCCAGAA
Product: tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
Products: NA
Alternate protein names: Glucose-inhibited division protein A
Number of amino acids: Translated: 632; Mature: 631
Protein sequence:
>632_residues MTVPEIFDVIVIGGGHAGTEAALAAARIGQKTLLLSHNIETLGQMSCNPSIGGIGKGHLVKEIDALGGVMAEAADEAGIQ FRILNSRKGPAVRATRAQADRVLYRQAIRQRLESQPNLWLFQQGVDDLVLEGERVAGVVTQLGIRFNARAVILTAGTFLA GLAHVGSANFQAGRAGDLPSNSLAGRLRELKLPVGRLKTGTPPRIDGRTIDYSAVAAQPGDAPVPVFSFMGNAASHPKQV SCWITHTNSQTHDIIRSGLDRSPLFSGAIEGIGPRYCPSIEDKVVRFSAKESHQIFLEPEGLTTHEVYPNGISTSLPFDM QVKLVRSIKGLENAHITRPGYAIEYDYFDPRALKSSLETRMIEGLFFAGQINGTTGYEEAAAQGLLAGINAALKTQDREP WCPRRDEAYLGVLVDDLITRGVTEPYRMFTSRAEYRLQLREDNADLRLTEVGRRLGVVNDARWVAFNIKLEAIAQEQNRL KTTWLSPKSLSETDALRVIGKNIEHECSLHDLLRRPNVSYAELMTLPGAGEPVVDLAAAEQVEIQAKYQGYIERQKDEVA RNAYYEDIRLPQDLDYKTVRGLSNEVQQKLNQFKPETAGQASRISGITPAAISLLLVHVKRGFSSANTKKSA
Sequences:
>Translated_632_residues MTVPEIFDVIVIGGGHAGTEAALAAARIGQKTLLLSHNIETLGQMSCNPSIGGIGKGHLVKEIDALGGVMAEAADEAGIQ FRILNSRKGPAVRATRAQADRVLYRQAIRQRLESQPNLWLFQQGVDDLVLEGERVAGVVTQLGIRFNARAVILTAGTFLA GLAHVGSANFQAGRAGDLPSNSLAGRLRELKLPVGRLKTGTPPRIDGRTIDYSAVAAQPGDAPVPVFSFMGNAASHPKQV SCWITHTNSQTHDIIRSGLDRSPLFSGAIEGIGPRYCPSIEDKVVRFSAKESHQIFLEPEGLTTHEVYPNGISTSLPFDM QVKLVRSIKGLENAHITRPGYAIEYDYFDPRALKSSLETRMIEGLFFAGQINGTTGYEEAAAQGLLAGINAALKTQDREP WCPRRDEAYLGVLVDDLITRGVTEPYRMFTSRAEYRLQLREDNADLRLTEVGRRLGVVNDARWVAFNIKLEAIAQEQNRL KTTWLSPKSLSETDALRVIGKNIEHECSLHDLLRRPNVSYAELMTLPGAGEPVVDLAAAEQVEIQAKYQGYIERQKDEVA RNAYYEDIRLPQDLDYKTVRGLSNEVQQKLNQFKPETAGQASRISGITPAAISLLLVHVKRGFSSANTKKSA >Mature_631_residues TVPEIFDVIVIGGGHAGTEAALAAARIGQKTLLLSHNIETLGQMSCNPSIGGIGKGHLVKEIDALGGVMAEAADEAGIQF RILNSRKGPAVRATRAQADRVLYRQAIRQRLESQPNLWLFQQGVDDLVLEGERVAGVVTQLGIRFNARAVILTAGTFLAG LAHVGSANFQAGRAGDLPSNSLAGRLRELKLPVGRLKTGTPPRIDGRTIDYSAVAAQPGDAPVPVFSFMGNAASHPKQVS CWITHTNSQTHDIIRSGLDRSPLFSGAIEGIGPRYCPSIEDKVVRFSAKESHQIFLEPEGLTTHEVYPNGISTSLPFDMQ VKLVRSIKGLENAHITRPGYAIEYDYFDPRALKSSLETRMIEGLFFAGQINGTTGYEEAAAQGLLAGINAALKTQDREPW CPRRDEAYLGVLVDDLITRGVTEPYRMFTSRAEYRLQLREDNADLRLTEVGRRLGVVNDARWVAFNIKLEAIAQEQNRLK TTWLSPKSLSETDALRVIGKNIEHECSLHDLLRRPNVSYAELMTLPGAGEPVVDLAAAEQVEIQAKYQGYIERQKDEVAR NAYYEDIRLPQDLDYKTVRGLSNEVQQKLNQFKPETAGQASRISGITPAAISLLLVHVKRGFSSANTKKSA
Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
COG id: COG0445
COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MnmG family
Homologues:
Organism=Homo sapiens, GI74024895, Length=642, Percent_Identity=46.2616822429907, Blast_Score=495, Evalue=1e-140, Organism=Homo sapiens, GI19882217, Length=667, Percent_Identity=44.527736131934, Blast_Score=482, Evalue=1e-136, Organism=Homo sapiens, GI183227703, Length=682, Percent_Identity=43.5483870967742, Blast_Score=477, Evalue=1e-134, Organism=Escherichia coli, GI2367273, Length=621, Percent_Identity=67.3107890499195, Blast_Score=874, Evalue=0.0, Organism=Caenorhabditis elegans, GI17534255, Length=625, Percent_Identity=40.8, Blast_Score=460, Evalue=1e-129, Organism=Saccharomyces cerevisiae, GI6321202, Length=623, Percent_Identity=45.5858747993579, Blast_Score=510, Evalue=1e-145, Organism=Drosophila melanogaster, GI24658174, Length=644, Percent_Identity=45.8074534161491, Blast_Score=503, Evalue=1e-142,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MNMG_NITMU (Q2Y5B4)
Other databases:
- EMBL: CP000103 - RefSeq: YP_413449.2 - ProteinModelPortal: Q2Y5B4 - SMR: Q2Y5B4 - STRING: Q2Y5B4 - GeneID: 3785365 - GenomeReviews: CP000103_GR - KEGG: nmu:Nmul_A2770 - eggNOG: COG0445 - HOGENOM: HBG284774 - PhylomeDB: Q2Y5B4 - ProtClustDB: PRK05192 - BioCyc: NMUL323848:NMUL_A2770-MONOMER - GO: GO:0005737 - HAMAP: MF_00129 - InterPro: IPR004416 - InterPro: IPR002218 - InterPro: IPR020595 - TIGRFAMs: TIGR00136
Pfam domain/function: PF01134 GIDA
EC number: NA
Molecular weight: Translated: 69164; Mature: 69032
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: PS01280 GIDA_1; PS01281 GIDA_2
Important sites: BINDING 125-125 BINDING 180-180 BINDING 370-370
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVPEIFDVIVIGGGHAGTEAALAAARIGQKTLLLSHNIETLGQMSCNPSIGGIGKGHLV CCCCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCHHHHHCCCCCCCCCCCCCCHHH KEIDALGGVMAEAADEAGIQFRILNSRKGPAVRATRAQADRVLYRQAIRQRLESQPNLWL HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCEEE FQQGVDDLVLEGERVAGVVTQLGIRFNARAVILTAGTFLAGLAHVGSANFQAGRAGDLPS ECCCCHHHHHCCHHHHHHHHHHCCEECCCEEEEECHHHHHHHHHCCCCCCCCCCCCCCCC NSLAGRLRELKLPVGRLKTGTPPRIDGRTIDYSAVAAQPGDAPVPVFSFMGNAASHPKQV HHHHHHHHHHCCCHHHCCCCCCCCCCCCEECCCEEECCCCCCCCHHHHHCCCCCCCCCEE SCWITHTNSQTHDIIRSGLDRSPLFSGAIEGIGPRYCPSIEDKVVRFSAKESHQIFLEPE EEEEEECCCCHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHHEEEECCCCCEEEECCC GLTTHEVYPNGISTSLPFDMQVKLVRSIKGLENAHITRPGYAIEYDYFDPRALKSSLETR CCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCEEEEECCCCHHHHHHHHHHH MIEGLFFAGQINGTTGYEEAAAQGLLAGINAALKTQDREPWCPRRDEAYLGVLVDDLITR HHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH GVTEPYRMFTSRAEYRLQLREDNADLRLTEVGRRLGVVNDARWVAFNIKLEAIAQEQNRL CCCHHHHHHHCCCCEEEEEECCCCCEEHHHHHHHHCCCCCCEEEEEEEEEHHHHHHHHHH KTTWLSPKSLSETDALRVIGKNIEHECSLHDLLRRPNVSYAELMTLPGAGEPVVDLAAAE EEEECCCCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCCCHHHHEECCCCCCCHHHHHCCC QVEIQAKYQGYIERQKDEVARNAYYEDIRLPQDLDYKTVRGLSNEVQQKLNQFKPETAGQ CEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC ASRISGITPAAISLLLVHVKRGFSSANTKKSA HHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TVPEIFDVIVIGGGHAGTEAALAAARIGQKTLLLSHNIETLGQMSCNPSIGGIGKGHLV CCCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCHHHHHCCCCCCCCCCCCCCHHH KEIDALGGVMAEAADEAGIQFRILNSRKGPAVRATRAQADRVLYRQAIRQRLESQPNLWL HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCEEE FQQGVDDLVLEGERVAGVVTQLGIRFNARAVILTAGTFLAGLAHVGSANFQAGRAGDLPS ECCCCHHHHHCCHHHHHHHHHHCCEECCCEEEEECHHHHHHHHHCCCCCCCCCCCCCCCC NSLAGRLRELKLPVGRLKTGTPPRIDGRTIDYSAVAAQPGDAPVPVFSFMGNAASHPKQV HHHHHHHHHHCCCHHHCCCCCCCCCCCCEECCCEEECCCCCCCCHHHHHCCCCCCCCCEE SCWITHTNSQTHDIIRSGLDRSPLFSGAIEGIGPRYCPSIEDKVVRFSAKESHQIFLEPE EEEEEECCCCHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHHEEEECCCCCEEEECCC GLTTHEVYPNGISTSLPFDMQVKLVRSIKGLENAHITRPGYAIEYDYFDPRALKSSLETR CCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCEEEEECCCCHHHHHHHHHHH MIEGLFFAGQINGTTGYEEAAAQGLLAGINAALKTQDREPWCPRRDEAYLGVLVDDLITR HHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH GVTEPYRMFTSRAEYRLQLREDNADLRLTEVGRRLGVVNDARWVAFNIKLEAIAQEQNRL CCCHHHHHHHCCCCEEEEEECCCCCEEHHHHHHHHCCCCCCEEEEEEEEEHHHHHHHHHH KTTWLSPKSLSETDALRVIGKNIEHECSLHDLLRRPNVSYAELMTLPGAGEPVVDLAAAE EEEECCCCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCCCHHHHEECCCCCCCHHHHHCCC QVEIQAKYQGYIERQKDEVARNAYYEDIRLPQDLDYKTVRGLSNEVQQKLNQFKPETAGQ CEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC ASRISGITPAAISLLLVHVKRGFSSANTKKSA HHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA