| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is pac [H]
Identifier: 82546688
GI number: 82546688
Start: 4445504
End: 4446850
Strand: Direct
Name: pac [H]
Synonym: SBO_4393
Alternate gene names: 82546688
Gene position: 4445504-4446850 (Clockwise)
Preceding gene: 82546687
Following gene: 82546692
Centisome position: 98.36
GC content: 47.51
Gene sequence:
>1347_bases ATGATCGTGAACTGTGTTACTGCTTCCCTGATGTATTATTGGAGCTTACCTGCACTGGCTGAGCAGTCGTCAAGTGAGAT AAAGATTGTTCGCGATGAATACGGCATGCCGCATATTTATGCCAATGATACATGGCACCTATTTTATGGCTATGGCTATG TAGTAGCACAAGATCGCCTTTTTCAGATGGAAATGGCACGTCGCAGTACTCAAGGGACTGTCGCGGAAGTGCTTGGCAAA GATTTTGTGAAATTTGATAAAGATATCCGTCGTAACTACTGGCCGGATGCTATCCGGGCGCAAATTGATGCCCTTTCCCC AGAGGATATGTCCATTCTGCAAGGCTACGCTGATGGAATGAATGCCTGGATTGATAAGGTAAATACCAATCCAGAGACGC TCTTACCAAAACAGTTTAATACATTTGGCTTTACTCCTAAGCGCTGGGAACCGTTTGATGTCGCGATGATATTTGTGGGC ACCATGGCAAACCGCTTCTCTGATAGCACTAGCGAAATTGATAATCTGGCACTGCTAACGGCTTTAAAAGATAAATATGG TGTATCACAAGGCATGGCGGTATTTAATCAGTTGAAATGGCTGGTAAACCCATCAGCGCCAACCACTATTGCCGTACAAG AGAGTAGCTACCCACTTAAATTTAATCAGCAAAACTCGCAAACAGCAGCTCTGTTGCCACGCTACGATTTACCTGCACCA ATGCTTGACCGACCAGCAAAAGGGGCGGATGGCGCACTGCTGGCGTTAACAGCAGGGAAGAACCGGGAAACTATTGCTGC ACAATTTGCACAGGGTGGTGCCAATGGTCTGGCGGGGTATCCAACGACCAGCAATATGTGGGTGATCGGCAAAAGCAAAG CCCAGGATGCGAAAGCAATCATGGTAAATGGTCCGCAGTTTGGCTGGTATGCGCCTGCGTATACTTATGGTATTGGTCTG CACGGTGCTGGTTATGATGTCACTGGCAATACACCATTTGCCTATCCTGGGCTGGTTTTTGGTCATAATGGTGTGATTTC CTGGGGATCAACGGCAGGTTTCGGCGATGATGTCGATATTTTTGCTGAACGGCTGTCGGCAGAGAAACCAGGCTACTACT TACATAATTGTAAGTGGGTGAAAATGTTAAGCCGTGAGGAAACCATTACGGTGAAAAATGGTCAGGCAGAGACCTTTACT GTCTGGCGTACGGTGCATGGCAACATTCTCCAAACTGACCAGACGACACAAACGGCTTACGCTAAATCCCGCGCATGGGA TGGTAAAGAGGTGGCGTCTTTGCTGGCCTGGACTCATCAGATGAAGGCCAAAAATTGGCAGGAGTAG
Upstream 100 bases:
>100_bases TCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAA TCCAGAAAAATAGAAATCGT
Downstream 100 bases:
>100_bases CGAAACAAGCACTGACCATCAACTGGTACTATGCTGATGTAAACGGCAATATTGGTTATGTTCATACTGGTGCTTATCCA GATCGTCAATCAGGCCATGA
Product: penicillin G acylase
Products: NA
Alternate protein names: Penicillin G amidase; Penicillin G amidohydrolase [H]
Number of amino acids: Translated: 448; Mature: 448
Protein sequence:
>448_residues MIVNCVTASLMYYWSLPALAEQSSSEIKIVRDEYGMPHIYANDTWHLFYGYGYVVAQDRLFQMEMARRSTQGTVAEVLGK DFVKFDKDIRRNYWPDAIRAQIDALSPEDMSILQGYADGMNAWIDKVNTNPETLLPKQFNTFGFTPKRWEPFDVAMIFVG TMANRFSDSTSEIDNLALLTALKDKYGVSQGMAVFNQLKWLVNPSAPTTIAVQESSYPLKFNQQNSQTAALLPRYDLPAP MLDRPAKGADGALLALTAGKNRETIAAQFAQGGANGLAGYPTTSNMWVIGKSKAQDAKAIMVNGPQFGWYAPAYTYGIGL HGAGYDVTGNTPFAYPGLVFGHNGVISWGSTAGFGDDVDIFAERLSAEKPGYYLHNCKWVKMLSREETITVKNGQAETFT VWRTVHGNILQTDQTTQTAYAKSRAWDGKEVASLLAWTHQMKAKNWQE
Sequences:
>Translated_448_residues MIVNCVTASLMYYWSLPALAEQSSSEIKIVRDEYGMPHIYANDTWHLFYGYGYVVAQDRLFQMEMARRSTQGTVAEVLGK DFVKFDKDIRRNYWPDAIRAQIDALSPEDMSILQGYADGMNAWIDKVNTNPETLLPKQFNTFGFTPKRWEPFDVAMIFVG TMANRFSDSTSEIDNLALLTALKDKYGVSQGMAVFNQLKWLVNPSAPTTIAVQESSYPLKFNQQNSQTAALLPRYDLPAP MLDRPAKGADGALLALTAGKNRETIAAQFAQGGANGLAGYPTTSNMWVIGKSKAQDAKAIMVNGPQFGWYAPAYTYGIGL HGAGYDVTGNTPFAYPGLVFGHNGVISWGSTAGFGDDVDIFAERLSAEKPGYYLHNCKWVKMLSREETITVKNGQAETFT VWRTVHGNILQTDQTTQTAYAKSRAWDGKEVASLLAWTHQMKAKNWQE >Mature_448_residues MIVNCVTASLMYYWSLPALAEQSSSEIKIVRDEYGMPHIYANDTWHLFYGYGYVVAQDRLFQMEMARRSTQGTVAEVLGK DFVKFDKDIRRNYWPDAIRAQIDALSPEDMSILQGYADGMNAWIDKVNTNPETLLPKQFNTFGFTPKRWEPFDVAMIFVG TMANRFSDSTSEIDNLALLTALKDKYGVSQGMAVFNQLKWLVNPSAPTTIAVQESSYPLKFNQQNSQTAALLPRYDLPAP MLDRPAKGADGALLALTAGKNRETIAAQFAQGGANGLAGYPTTSNMWVIGKSKAQDAKAIMVNGPQFGWYAPAYTYGIGL HGAGYDVTGNTPFAYPGLVFGHNGVISWGSTAGFGDDVDIFAERLSAEKPGYYLHNCKWVKMLSREETITVKNGQAETFT VWRTVHGNILQTDQTTQTAYAKSRAWDGKEVASLLAWTHQMKAKNWQE
Specific function: Unknown
COG id: COG2366
COG function: function code R; Protein related to penicillin acylase
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S45 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014395 - InterPro: IPR002692 [H]
Pfam domain/function: PF01804 Penicil_amidase [H]
EC number: =3.5.1.11 [H]
Molecular weight: Translated: 49807; Mature: 49807
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVNCVTASLMYYWSLPALAEQSSSEIKIVRDEYGMPHIYANDTWHLFYGYGYVVAQDRL CEEHHHHHHHHHHHCCCHHHCCCCCCEEEEECCCCCCEEEECCEEEEEEEEEEEEEHHHH FQMEMARRSTQGTVAEVLGKDFVKFDKDIRRNYWPDAIRAQIDALSPEDMSILQGYADGM HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHH NAWIDKVNTNPETLLPKQFNTFGFTPKRWEPFDVAMIFVGTMANRFSDSTSEIDNLALLT HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH ALKDKYGVSQGMAVFNQLKWLVNPSAPTTIAVQESSYPLKFNQQNSQTAALLPRYDLPAP HHHHHHCHHHHHHHHHHHHHEECCCCCCEEEEECCCCCEEECCCCCCEEEECCCCCCCCC MLDRPAKGADGALLALTAGKNRETIAAQFAQGGANGLAGYPTTSNMWVIGKSKAQDAKAI CCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCEE MVNGPQFGWYAPAYTYGIGLHGAGYDVTGNTPFAYPGLVFGHNGVISWGSTAGFGDDVDI EEECCCCCCCCCHHEEEEEECCCCEECCCCCCCCCCCEEECCCCEEECCCCCCCCCCHHH FAERLSAEKPGYYLHNCKWVKMLSREETITVKNGQAETFTVWRTVHGNILQTDQTTQTAY HHHHHCCCCCCCEEECCCEEEECCCCCEEEEECCCCCEEEEEEEECCCEEECCCCHHHHH AKSRAWDGKEVASLLAWTHQMKAKNWQE HHHCCCCHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MIVNCVTASLMYYWSLPALAEQSSSEIKIVRDEYGMPHIYANDTWHLFYGYGYVVAQDRL CEEHHHHHHHHHHHCCCHHHCCCCCCEEEEECCCCCCEEEECCEEEEEEEEEEEEEHHHH FQMEMARRSTQGTVAEVLGKDFVKFDKDIRRNYWPDAIRAQIDALSPEDMSILQGYADGM HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHH NAWIDKVNTNPETLLPKQFNTFGFTPKRWEPFDVAMIFVGTMANRFSDSTSEIDNLALLT HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH ALKDKYGVSQGMAVFNQLKWLVNPSAPTTIAVQESSYPLKFNQQNSQTAALLPRYDLPAP HHHHHHCHHHHHHHHHHHHHEECCCCCCEEEEECCCCCEEECCCCCCEEEECCCCCCCCC MLDRPAKGADGALLALTAGKNRETIAAQFAQGGANGLAGYPTTSNMWVIGKSKAQDAKAI CCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCEE MVNGPQFGWYAPAYTYGIGLHGAGYDVTGNTPFAYPGLVFGHNGVISWGSTAGFGDDVDI EEECCCCCCCCCHHEEEEEECCCCEECCCCCCCCCCCEEECCCCEEECCCCCCCCCCHHH FAERLSAEKPGYYLHNCKWVKMLSREETITVKNGQAETFTVWRTVHGNILQTDQTTQTAY HHHHHCCCCCCCEEECCCEEEECCCCCEEEEECCCCCEEEEEEEECCCEEECCCCHHHHH AKSRAWDGKEVASLLAWTHQMKAKNWQE HHHCCCCHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3016663; 3315861; 3005131; 3556321; 2989404; 1849824; 2205499; 7816145; 11601852 [H]