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The map label for this gene is yjeF [H]

Identifier: 82546593

GI number: 82546593

Start: 4338667

End: 4340214

Strand: Reverse

Name: yjeF [H]

Synonym: SBO_4290

Alternate gene names: 82546593

Gene position: 4340214-4338667 (Counterclockwise)

Preceding gene: 161984789

Following gene: 82546591

Centisome position: 96.03

GC content: 57.17

Gene sequence:

>1548_bases
ATGACGGACCATACAATGAAGAAAAACCCCGTAAGTATACCACACACCGTCTGGTACGCCGACGATATCCGCCGCGGAGA
ACGCGAGGCGGCAGATGTGCTGGGGCTCACACTCTATGAGCTGATGCTTCGCGCTGGCGAGGCCGCATTCCAGGTGTGTC
GTTCGGCGTATCCTGACGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGCGATGGCTACGTGGTCGCG
CGACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTTGCCCAGGAGAGCGACAAACCGTTGCCGGAAGAGGCCGCGCT
GGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGTCTGGCCCGAATCGGTAGATCTGATTG
TTGATGCGCTGCTCGGTACCGGTTTGCGGCAAGCGCCCCGCGAATCCATTAGCCAGTTAATCGACCACGCTAATTCCCAT
CCTGCGCCGATTGTGGCGGTTGATATCCCTTCCGGCCTGCTGGCTGAAACTGGCGCTACGCCAGGCGCGGTGATCAACGC
CGATCACACCATCACTTTTATTGCGCTGAAACCAGGCTTGCTCACTGGAAAAGCGCGGGATGTTACCGGACAACTGCATT
TTGACTCACTGGGGCTGGATAGTTGGCTGGCAGGTCAGGAGACGAAAATTCAGCGGTTTTCAGCAGAACAACTTTCTCAC
TGGCTAAAACCGCGTCGCCCGACTTCGCATAAAGGCGATCACGGGCGGCTGGTAATTATCGGTGGCGATCACGGCACGGC
GGGGGCTATTCGTATGACGGGGGAAGCGGCGCTGCGTGCTGGTGCTGGTTTAGTCCGAGTACTGACCCGCAGTGAAAACA
TTGCGCCGCTGCTGACTGCACGACCGGAATTGATGGTGCATGAACTGACGATGGACTCTCTTACCGAAAGCCTGGAATGG
GCCGATGTGGTGGTGATTGGTCCCGGTCTGGGCCAGCAAGAGTGGGGGAAAAAAGCACTGCAAAAAGTTGAGAATTTTCG
CAAACCGATGTTGTGGGATGCCGATGCATTGAACCTGCTGGCAATCAATCCCGATAAGCGTCACAATCGCGTGATCACGC
CGCATCCTGGCGAGGCCGCACGGTTGTTAGGCTGTTCCGTCGCTGAAATTGAAAGTGACCGCTTACATTGCGCCAAACGT
CTGGTACAACGTTATGGCGGCGTAGCGGTGCTGAAAGGTGCCGGAACCGTGGTCGCCGCCCATCCTGACGCTTTAGGCAT
TATTGATGCCGGAAATGCAGGCATGGCGAGCGGCGGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTGGGC
AAAAACTGTCGCCGTATGATGCCGCCTGTGCGGGCTGTGTCGCGCACGGTGCGGCAGCTGACGTACTGGCGGCGCGTTTT
GGAACGCGCGGGATGCTGGCAACCGATCTCTTTTCCACGCTACAGCGTATTGTTAACCCGGAAGTGACTGATAAAAACCA
TGATGAATCGAGTAATTCCGCTCCCTGA

Upstream 100 bases:

>100_bases
GCTGAGATCGGTATCGGTAATACCTACCTGCTGAAAGCCCAGTTCCAGCCCCCACTGTTTAATTTTTTGCGCTAACTGAT
TGAGATCGAGGGGCTCTGAC

Downstream 100 bases:

>100_bases
TGAGCAGGCAACATTAGACCTGGGCGAGCGGGTAGCGAAAGCCTGCGATGGCGCAACCGTAATCTATCTGTATGGCGATT
TAGGCGCAGGTAAGACCACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 515; Mature: 514

Protein sequence:

>515_residues
MTDHTMKKNPVSIPHTVWYADDIRRGEREAADVLGLTLYELMLRAGEAAFQVCRSAYPDARHWLVLCGHGNNGGDGYVVA
RLAKAVGIEVTLFAQESDKPLPEEAALAREAWLNAGGEIHASNIVWPESVDLIVDALLGTGLRQAPRESISQLIDHANSH
PAPIVAVDIPSGLLAETGATPGAVINADHTITFIALKPGLLTGKARDVTGQLHFDSLGLDSWLAGQETKIQRFSAEQLSH
WLKPRRPTSHKGDHGRLVIIGGDHGTAGAIRMTGEAALRAGAGLVRVLTRSENIAPLLTARPELMVHELTMDSLTESLEW
ADVVVIGPGLGQQEWGKKALQKVENFRKPMLWDADALNLLAINPDKRHNRVITPHPGEAARLLGCSVAEIESDRLHCAKR
LVQRYGGVAVLKGAGTVVAAHPDALGIIDAGNAGMASGGMGDVLSGIIGALLGQKLSPYDAACAGCVAHGAAADVLAARF
GTRGMLATDLFSTLQRIVNPEVTDKNHDESSNSAP

Sequences:

>Translated_515_residues
MTDHTMKKNPVSIPHTVWYADDIRRGEREAADVLGLTLYELMLRAGEAAFQVCRSAYPDARHWLVLCGHGNNGGDGYVVA
RLAKAVGIEVTLFAQESDKPLPEEAALAREAWLNAGGEIHASNIVWPESVDLIVDALLGTGLRQAPRESISQLIDHANSH
PAPIVAVDIPSGLLAETGATPGAVINADHTITFIALKPGLLTGKARDVTGQLHFDSLGLDSWLAGQETKIQRFSAEQLSH
WLKPRRPTSHKGDHGRLVIIGGDHGTAGAIRMTGEAALRAGAGLVRVLTRSENIAPLLTARPELMVHELTMDSLTESLEW
ADVVVIGPGLGQQEWGKKALQKVENFRKPMLWDADALNLLAINPDKRHNRVITPHPGEAARLLGCSVAEIESDRLHCAKR
LVQRYGGVAVLKGAGTVVAAHPDALGIIDAGNAGMASGGMGDVLSGIIGALLGQKLSPYDAACAGCVAHGAAADVLAARF
GTRGMLATDLFSTLQRIVNPEVTDKNHDESSNSAP
>Mature_514_residues
TDHTMKKNPVSIPHTVWYADDIRRGEREAADVLGLTLYELMLRAGEAAFQVCRSAYPDARHWLVLCGHGNNGGDGYVVAR
LAKAVGIEVTLFAQESDKPLPEEAALAREAWLNAGGEIHASNIVWPESVDLIVDALLGTGLRQAPRESISQLIDHANSHP
APIVAVDIPSGLLAETGATPGAVINADHTITFIALKPGLLTGKARDVTGQLHFDSLGLDSWLAGQETKIQRFSAEQLSHW
LKPRRPTSHKGDHGRLVIIGGDHGTAGAIRMTGEAALRAGAGLVRVLTRSENIAPLLTARPELMVHELTMDSLTESLEWA
DVVVIGPGLGQQEWGKKALQKVENFRKPMLWDADALNLLAINPDKRHNRVITPHPGEAARLLGCSVAEIESDRLHCAKRL
VQRYGGVAVLKGAGTVVAAHPDALGIIDAGNAGMASGGMGDVLSGIIGALLGQKLSPYDAACAGCVAHGAAADVLAARFG
TRGMLATDLFSTLQRIVNPEVTDKNHDESSNSAP

Specific function: Unknown

COG id: COG0063

COG function: function code G; Predicted sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YjeF N-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI119709830, Length=226, Percent_Identity=30.5309734513274, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI91984773, Length=198, Percent_Identity=30.8080808080808, Blast_Score=73, Evalue=7e-13,
Organism=Escherichia coli, GI1790609, Length=515, Percent_Identity=99.8058252427185, Blast_Score=1040, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17554656, Length=236, Percent_Identity=28.3898305084746, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21357759, Length=279, Percent_Identity=29.7491039426523, Blast_Score=74, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017953
- InterPro:   IPR000631
- InterPro:   IPR004443 [H]

Pfam domain/function: PF01256 Carb_kinase; PF03853 YjeF_N [H]

EC number: NA

Molecular weight: Translated: 54685; Mature: 54554

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: PS00147 ARGINASE_1 ; PS01049 UPF0031_1 ; PS01050 UPF0031_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDHTMKKNPVSIPHTVWYADDIRRGEREAADVLGLTLYELMLRAGEAAFQVCRSAYPDA
CCCCCCCCCCCCCCEEEEEHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCC
RHWLVLCGHGNNGGDGYVVARLAKAVGIEVTLFAQESDKPLPEEAALAREAWLNAGGEIH
CEEEEEEECCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEE
ASNIVWPESVDLIVDALLGTGLRQAPRESISQLIDHANSHPAPIVAVDIPSGLLAETGAT
ECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHCCCC
PGAVINADHTITFIALKPGLLTGKARDVTGQLHFDSLGLDSWLAGQETKIQRFSAEQLSH
CCEEEECCCEEEEEEECCCEECCCCCCCEEEEEECCCCCCHHHCCCCHHHHHHHHHHHHH
WLKPRRPTSHKGDHGRLVIIGGDHGTAGAIRMTGEAALRAGAGLVRVLTRSENIAPLLTA
HHCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCHHHHHHCCHHHHHHHCCCCCCEEECC
RPELMVHELTMDSLTESLEWADVVVIGPGLGQQEWGKKALQKVENFRKPMLWDADALNLL
CCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEECCCCCEEE
AINPDKRHNRVITPHPGEAARLLGCSVAEIESDRLHCAKRLVQRYGGVAVLKGAGTVVAA
EECCCCCCCEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEE
HPDALGIIDAGNAGMASGGMGDVLSGIIGALLGQKLSPYDAACAGCVAHGAAADVLAARF
CCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
GTRGMLATDLFSTLQRIVNPEVTDKNHDESSNSAP
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TDHTMKKNPVSIPHTVWYADDIRRGEREAADVLGLTLYELMLRAGEAAFQVCRSAYPDA
CCCCCCCCCCCCCEEEEEHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCC
RHWLVLCGHGNNGGDGYVVARLAKAVGIEVTLFAQESDKPLPEEAALAREAWLNAGGEIH
CEEEEEEECCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEE
ASNIVWPESVDLIVDALLGTGLRQAPRESISQLIDHANSHPAPIVAVDIPSGLLAETGAT
ECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHCCCC
PGAVINADHTITFIALKPGLLTGKARDVTGQLHFDSLGLDSWLAGQETKIQRFSAEQLSH
CCEEEECCCEEEEEEECCCEECCCCCCCEEEEEECCCCCCHHHCCCCHHHHHHHHHHHHH
WLKPRRPTSHKGDHGRLVIIGGDHGTAGAIRMTGEAALRAGAGLVRVLTRSENIAPLLTA
HHCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCHHHHHHCCHHHHHHHCCCCCCEEECC
RPELMVHELTMDSLTESLEWADVVVIGPGLGQQEWGKKALQKVENFRKPMLWDADALNLL
CCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEECCCCCEEE
AINPDKRHNRVITPHPGEAARLLGCSVAEIESDRLHCAKRLVQRYGGVAVLKGAGTVVAA
EECCCCCCCEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEE
HPDALGIIDAGNAGMASGGMGDVLSGIIGALLGQKLSPYDAACAGCVAHGAAADVLAARF
CCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
GTRGMLATDLFSTLQRIVNPEVTDKNHDESSNSAP
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 7511774 [H]