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The map label for this gene is yagU [H]

Identifier: 82546560

GI number: 82546560

Start: 4308572

End: 4309123

Strand: Reverse

Name: yagU [H]

Synonym: SBO_4256

Alternate gene names: 82546560

Gene position: 4309123-4308572 (Counterclockwise)

Preceding gene: 82546561

Following gene: 82546558

Centisome position: 95.34

GC content: 46.74

Gene sequence:

>552_bases
ATGGCTATCAATGGATTGTTTGTCAGAACGGATCCGCAACGTCGCCGCTATGGCGTTGCGTTACTTGTGGGTGTACTTTC
AGGAATTATTTCAGCATTTGTTAAATGGGGAGCGGAAGTCCCCTTGCCACCGCGCACATTTTCCGGTGGTCGCGATGAAT
TTAACCCGCCGTATATCTTTCTACGGGATTATTTAGGTATCGACCCAACCCAAACTGTGTATACATTCTCGGAACATATT
ATCAACCCGGTGATGGTGACGCATATCATCTTCTCACTGGTTTTTGCGATAGGGTATTGTATTGTCGCGGAAATTTTCCC
GAAAGTGAAATTATGGCAGGGGATATTAGCAGGGCTTATTGTGACAGTGGCAGTCCACGGTATATTTTGCCCGGCGCTGA
ATTTAACGCCGCCGCTCACTCAATTGCCTTTTGACGAATATGCCTCTGAAATCCTGGGGCATATTTTCTGGTTCTGGATA
ATAGAAATTATGCGCCGCGACTTACGTAATCGCATTACTCATGAGCCAGATCCGGAAGTCGCAATCCGGTGA

Upstream 100 bases:

>100_bases
GTAAGCAGTGCGCCCCGGAATTATTACCTCCTGCGGGATGTAATTGGTCTGATTCCGGGGCCGCTTCAGTTAAAAAATCG
TATAAACAACAGGTGTTTTT

Downstream 100 bases:

>100_bases
ATAACCGTATAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCG
ATAAATATCCGCGCTGGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MAINGLFVRTDPQRRRYGVALLVGVLSGIISAFVKWGAEVPLPPRTFSGGRDEFNPPYIFLRDYLGIDPTQTVYTFSEHI
INPVMVTHIIFSLVFAIGYCIVAEIFPKVKLWQGILAGLIVTVAVHGIFCPALNLTPPLTQLPFDEYASEILGHIFWFWI
IEIMRRDLRNRITHEPDPEVAIR

Sequences:

>Translated_183_residues
MAINGLFVRTDPQRRRYGVALLVGVLSGIISAFVKWGAEVPLPPRTFSGGRDEFNPPYIFLRDYLGIDPTQTVYTFSEHI
INPVMVTHIIFSLVFAIGYCIVAEIFPKVKLWQGILAGLIVTVAVHGIFCPALNLTPPLTQLPFDEYASEILGHIFWFWI
IEIMRRDLRNRITHEPDPEVAIR
>Mature_182_residues
AINGLFVRTDPQRRRYGVALLVGVLSGIISAFVKWGAEVPLPPRTFSGGRDEFNPPYIFLRDYLGIDPTQTVYTFSEHII
NPVMVTHIIFSLVFAIGYCIVAEIFPKVKLWQGILAGLIVTVAVHGIFCPALNLTPPLTQLPFDEYASEILGHIFWFWII
EIMRRDLRNRITHEPDPEVAIR

Specific function: Unknown

COG id: COG3477

COG function: function code S; Predicted periplasmic/secreted protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786481, Length=199, Percent_Identity=56.2814070351759, Blast_Score=228, Evalue=2e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009898 [H]

Pfam domain/function: PF07274 DUF1440 [H]

EC number: NA

Molecular weight: Translated: 20764; Mature: 20632

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAINGLFVRTDPQRRRYGVALLVGVLSGIISAFVKWGAEVPLPPRTFSGGRDEFNPPYIF
CCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEE
LRDYLGIDPTQTVYTFSEHIINPVMVTHIIFSLVFAIGYCIVAEIFPKVKLWQGILAGLI
EHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTVAVHGIFCPALNLTPPLTQLPFDEYASEILGHIFWFWIIEIMRRDLRNRITHEPDPEV
HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
AIR
CCC
>Mature Secondary Structure 
AINGLFVRTDPQRRRYGVALLVGVLSGIISAFVKWGAEVPLPPRTFSGGRDEFNPPYIF
CCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEE
LRDYLGIDPTQTVYTFSEHIINPVMVTHIIFSLVFAIGYCIVAEIFPKVKLWQGILAGLI
EHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTVAVHGIFCPALNLTPPLTQLPFDEYASEILGHIFWFWIIEIMRRDLRNRITHEPDPEV
HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
AIR
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]