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The map label for this gene is nrfB [H]

Identifier: 82546415

GI number: 82546415

Start: 4145507

End: 4146079

Strand: Direct

Name: nrfB [H]

Synonym: SBO_4102

Alternate gene names: 82546415

Gene position: 4145507-4146079 (Clockwise)

Preceding gene: 82546414

Following gene: 82546416

Centisome position: 91.72

GC content: 53.93

Gene sequence:

>573_bases
GTGAATATGAGCGTATTACGTTCGTTATTAACTGCTGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGAACGGAATTAC
CGCTACCCCTGCGGCGCAGGCATCTGGTGATCGCTACGAAGTTACCCAGCAGCGTAACCCGGATGCCGCCTGTCTGGACT
GTCATAAACCAGATACCGAAGGTATGCATGGCAAACATGCTTCCGTTATCAACCCGAATAACAAATTGCCGGTCACCTGC
ACCAACTGTCACGGCCAGCCATCACCGCAACACCGCGAAGGGGTGAAAGATGTGATGCGCTTTAACGAGCCGATGTACAA
GGTCGGAGAGCAGAACAGCGTCTGTATGTCCTGTCATCTGCCGGAACAGTTGCAAAAAGCGTTCTGGCCGCACGATGTCC
ACGTAACCAAAGTGGCGTGCGCCAGCTGCCATTCCCTGCATCCACAGCAAGATACGATGCAGACGTTAAGTGACAAAGGA
CGGATTAAGATTTGCGTCGATTGCCACAGCGATCAGCGCACCAATCCGAACTTTAACCCGGCGTCTGTTCCGTTGCTTAA
GGAGCAGCCATGA

Upstream 100 bases:

>100_bases
TCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAA
GGGGCGGAAAACACAATGGA

Downstream 100 bases:

>100_bases
CCTGGTCTCGTCGCCAGTTTCTCACCGGCGTCGGCGTGCTGGCAGCCGTCAGCGGCACCGCAGGGCGCGTGGTGGCGAAA
ACGTTGAATATCAATGGGGT

Product: cytochrome c nitrite reductase pentaheme subunit

Products: oxidized cytochrome C552; NH3 [C]

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MNMSVLRSLLTAGVLASGLLWSLNGITATPAAQASGDRYEVTQQRNPDAACLDCHKPDTEGMHGKHASVINPNNKLPVTC
TNCHGQPSPQHREGVKDVMRFNEPMYKVGEQNSVCMSCHLPEQLQKAFWPHDVHVTKVACASCHSLHPQQDTMQTLSDKG
RIKICVDCHSDQRTNPNFNPASVPLLKEQP

Sequences:

>Translated_190_residues
MNMSVLRSLLTAGVLASGLLWSLNGITATPAAQASGDRYEVTQQRNPDAACLDCHKPDTEGMHGKHASVINPNNKLPVTC
TNCHGQPSPQHREGVKDVMRFNEPMYKVGEQNSVCMSCHLPEQLQKAFWPHDVHVTKVACASCHSLHPQQDTMQTLSDKG
RIKICVDCHSDQRTNPNFNPASVPLLKEQP
>Mature_190_residues
MNMSVLRSLLTAGVLASGLLWSLNGITATPAAQASGDRYEVTQQRNPDAACLDCHKPDTEGMHGKHASVINPNNKLPVTC
TNCHGQPSPQHREGVKDVMRFNEPMYKVGEQNSVCMSCHLPEQLQKAFWPHDVHVTKVACASCHSLHPQQDTMQTLSDKG
RIKICVDCHSDQRTNPNFNPASVPLLKEQP

Specific function: Plays a role in nitrite reduction [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082366, Length=188, Percent_Identity=99.468085106383, Blast_Score=391, Evalue=1e-110,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017564
- InterPro:   IPR011031 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20902; Mature: 20902

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
8.9 %Cys+Met (Translated Protein)
5.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
8.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMSVLRSLLTAGVLASGLLWSLNGITATPAAQASGDRYEVTQQRNPDAACLDCHKPDTE
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEECCCCCCC
GMHGKHASVINPNNKLPVTCTNCHGQPSPQHREGVKDVMRFNEPMYKVGEQNSVCMSCHL
CCCCCCCEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCCEEEEECC
PEQLQKAFWPHDVHVTKVACASCHSLHPQQDTMQTLSDKGRIKICVDCHSDQRTNPNFNP
HHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC
ASVPLLKEQP
CCCCCCCCCC
>Mature Secondary Structure
MNMSVLRSLLTAGVLASGLLWSLNGITATPAAQASGDRYEVTQQRNPDAACLDCHKPDTE
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEECCCCCCC
GMHGKHASVINPNNKLPVTCTNCHGQPSPQHREGVKDVMRFNEPMYKVGEQNSVCMSCHL
CCCCCCCEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCCEEEEECC
PEQLQKAFWPHDVHVTKVACASCHSLHPQQDTMQTLSDKGRIKICVDCHSDQRTNPNFNP
HHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC
ASVPLLKEQP
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: reduced cytochrome C552; nitrite [C]

Specific reaction: reduced cytochrome C552 + nitrite = oxidized cytochrome C552 + NH3 [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]