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The map label for this gene is sorB [H]

Identifier: 82546361

GI number: 82546361

Start: 4090144

End: 4090638

Strand: Reverse

Name: sorB [H]

Synonym: SBO_4046

Alternate gene names: 82546361

Gene position: 4090638-4090144 (Counterclockwise)

Preceding gene: 82546362

Following gene: 82546360

Centisome position: 90.5

GC content: 45.25

Gene sequence:

>495_bases
ATGAACATTACGCTCGCCCGCATTGATGACCGCCTGATCCACGGTCAGGTCACTACCGTCTGGTCGAAAGTGGCTAACGC
CCAGCGCATTATTATCTGCAATGACGAAGTTTATAACGATGAAGTTCGCCGGACATTATTGCGTCAGGCTGCGCCACCGG
GAATGAAGGTTAACGTGGTCAATATTGAAAAAGCCGTCGCTGTTTATCACAACCCGCAATATCAGGACGAAACCGTTTTT
TATCTTTTCACTCGCCCACAGGATGCCTTAGCGATGGTTCGCCAAGGGGTAAAAATAGACACCCTAAATATTGGCGGCAT
GGCCTGGCGGCCCGGTAAAAAACAGTTAACCAAAGCGGTTTCATTAGATGATGATGATATTAACGCATTTCATGAGTTAA
ATAATCTTGGCGTCATACTGGATTTACGCGTCGTAGCGTCAGATCCCTCAATCAATATTATCGACAAAATAAACGAACAG
TTAATCGCAAATTAA

Upstream 100 bases:

>100_bases
ACAGCATGAATGTTGATGAACTGTGTGAACACCTGACGCAAATCGCAAAGCAAACCTGCGTTGTCTGGAAACAACTGGCA
ACGGCAGAGGAGGATTTCTG

Downstream 100 bases:

>100_bases
ATAATAGCGCTTGTGTACATATGCTTTAACAGGCAGGGATGACGACACTTAAAAGGTGAAAAATCATGGAAATAAGTACC
CTACAAATCATTGCTATATT

Product: sorbose-permease PTS system IIB component

Products: NA

Alternate protein names: EIIB-Sor; EIII-B-Sor; PTS system sorbose-specific EIIB component [H]

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MNITLARIDDRLIHGQVTTVWSKVANAQRIIICNDEVYNDEVRRTLLRQAAPPGMKVNVVNIEKAVAVYHNPQYQDETVF
YLFTRPQDALAMVRQGVKIDTLNIGGMAWRPGKKQLTKAVSLDDDDINAFHELNNLGVILDLRVVASDPSINIIDKINEQ
LIAN

Sequences:

>Translated_164_residues
MNITLARIDDRLIHGQVTTVWSKVANAQRIIICNDEVYNDEVRRTLLRQAAPPGMKVNVVNIEKAVAVYHNPQYQDETVF
YLFTRPQDALAMVRQGVKIDTLNIGGMAWRPGKKQLTKAVSLDDDDINAFHELNNLGVILDLRVVASDPSINIIDKINEQ
LIAN
>Mature_164_residues
MNITLARIDDRLIHGQVTTVWSKVANAQRIIICNDEVYNDEVRRTLLRQAAPPGMKVNVVNIEKAVAVYHNPQYQDETVF
YLFTRPQDALAMVRQGVKIDTLNIGGMAWRPGKKQLTKAVSLDDDDINAFHELNNLGVILDLRVVASDPSINIIDKINEQ
LIAN

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This

COG id: COG3444

COG function: function code G; Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIB type-4 domain [H]

Homologues:

Organism=Escherichia coli, GI1788120, Length=159, Percent_Identity=52.2012578616352, Blast_Score=172, Evalue=1e-44,
Organism=Escherichia coli, GI87082217, Length=153, Percent_Identity=33.9869281045752, Blast_Score=100, Evalue=4e-23,
Organism=Escherichia coli, GI1789527, Length=155, Percent_Identity=30.3225806451613, Blast_Score=67, Evalue=5e-13,

Paralogues:

None

Copy number: 220 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2880 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 260 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004720
- InterPro:   IPR018455 [H]

Pfam domain/function: PF03830 PTSIIB_sorb [H]

EC number: =2.7.1.69 [H]

Molecular weight: Translated: 18462; Mature: 18462

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: PS51101 PTS_EIIB_TYPE_4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNITLARIDDRLIHGQVTTVWSKVANAQRIIICNDEVYNDEVRRTLLRQAAPPGMKVNVV
CCEEEEECCCEEECCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEE
NIEKAVAVYHNPQYQDETVFYLFTRPQDALAMVRQGVKIDTLNIGGMAWRPGKKQLTKAV
ECCEEEEEEECCCCCCCEEEEEEECCHHHHHHHHCCCEEEEEECCCEEECCCHHHHHHHC
SLDDDDINAFHELNNLGVILDLRVVASDPSINIIDKINEQLIAN
CCCCCCHHHHHHHCCCEEEEEEEEEECCCCEEHHHHHHHHHHCC
>Mature Secondary Structure
MNITLARIDDRLIHGQVTTVWSKVANAQRIIICNDEVYNDEVRRTLLRQAAPPGMKVNVV
CCEEEEECCCEEECCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEE
NIEKAVAVYHNPQYQDETVFYLFTRPQDALAMVRQGVKIDTLNIGGMAWRPGKKQLTKAV
ECCEEEEEEECCCCCCCEEEEEEECCHHHHHHHHCCCEEEEEECCCEEECCCHHHHHHHC
SLDDDDINAFHELNNLGVILDLRVVASDPSINIIDKINEQLIAN
CCCCCCHHHHHHHCCCEEEEEEEEEECCCCEEHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7947968 [H]