Click here to switch to the map view.

The map label for this gene is pflC [H]

Identifier: 82546303

GI number: 82546303

Start: 4005090

End: 4005968

Strand: Direct

Name: pflC [H]

Synonym: SBO_3971

Alternate gene names: 82546303

Gene position: 4005090-4005968 (Clockwise)

Preceding gene: 82546302

Following gene: 82546304

Centisome position: 88.61

GC content: 54.84

Gene sequence:

>879_bases
ATGACATCATCCGCCGGACAGCGCATCAGCTGTAACGTTGTGGAAACGCGCCTCAATGATGTGGCGCGCATTTTCAACAT
TCAGCGTTATTCACTGAATGACGGCGAGGGCATTCGTACGGTGGTCTTTTTTAAAGGCTGTCCGCATCTTTGCCCGTGGT
GTGCTAATCCGGAGTCGATCTCCGGCAAAATCCAGACGGTACGCAGAGAGGCGAAATGTCTGCACTGTGCGAAATGTTTG
CGTGATGCGGATGAATGCCCCTCCGGGGCGTTTGAACGGATTGGTCGCGATATCAGCCTTGACGCTCTGGAACGGGAAGT
GATGAAAGATGACATTTTTTTTCGCACGTCCGGCGGCGGCGTCACGCTTTCTGGCGGCGAAGTGTTAATGCAGGCGGAGT
TTGCTACCCGTTTTTTACAGCGACTGCGGCTGTGGGGTGTCTCATGTGCCATTGAAACTGCCGGAGACGCACCAGCCAGC
AAGCTGTTACCGCTGGCGAAATTGTGCGATGAAGTGTTGTTCGATTTAAAAATTATGGACGCGACTCAGGCGCGGGATGT
GGTGAAGATGAACCTGCCACGCGTACTGGAGAACCTGCGTTTGCTGGTGAGTGAGGGTGTCAACGTGATCCCGCGTTTGC
CGCTGATCCCCGGTTTCACACTCAGCCGGGAGAATATGCAGCAGGCGCTGGACGTGCTGATCCCGCTGAATATCAGGCAG
ATCCATCTGTTGCCGTTTCATCAGTACGGCGAGCCGAAATACCGCCTGCTGGGGAAAACATGGTCGATGAAGGATGTTGC
TGCGCCGTCATCAGCCGATGTGGCAACGATGCGCGAAATGGCAGAACGGGCCGGATTTCAGGTTACCGTGGGAGGTTAA

Upstream 100 bases:

>100_bases
TTGTGGGAAGCGCAACAGCGCCCACAAGATTATGCCGGGCTGGTGGTGCGCGTTGCCGGATACAGCGCCTTCTTTGTCGA
ACTGTCGAAGGAGATCCAGG

Downstream 100 bases:

>100_bases
AATGGCATACCTGGTGGCAGTAACCGCCTGCGTAAGCGGCGTGGCGCATACTTATATGGCGGCGGAACGGCTGGAAAAGT
TGTGCCAGTTAGAGAAGTGG

Product: pyruvate formate lyase II activase

Products: NA

Alternate protein names: Formate-C-acetyltransferase-activating enzyme 2; PFL-activating enzyme 2 [H]

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MTSSAGQRISCNVVETRLNDVARIFNIQRYSLNDGEGIRTVVFFKGCPHLCPWCANPESISGKIQTVRREAKCLHCAKCL
RDADECPSGAFERIGRDISLDALEREVMKDDIFFRTSGGGVTLSGGEVLMQAEFATRFLQRLRLWGVSCAIETAGDAPAS
KLLPLAKLCDEVLFDLKIMDATQARDVVKMNLPRVLENLRLLVSEGVNVIPRLPLIPGFTLSRENMQQALDVLIPLNIRQ
IHLLPFHQYGEPKYRLLGKTWSMKDVAAPSSADVATMREMAERAGFQVTVGG

Sequences:

>Translated_292_residues
MTSSAGQRISCNVVETRLNDVARIFNIQRYSLNDGEGIRTVVFFKGCPHLCPWCANPESISGKIQTVRREAKCLHCAKCL
RDADECPSGAFERIGRDISLDALEREVMKDDIFFRTSGGGVTLSGGEVLMQAEFATRFLQRLRLWGVSCAIETAGDAPAS
KLLPLAKLCDEVLFDLKIMDATQARDVVKMNLPRVLENLRLLVSEGVNVIPRLPLIPGFTLSRENMQQALDVLIPLNIRQ
IHLLPFHQYGEPKYRLLGKTWSMKDVAAPSSADVATMREMAERAGFQVTVGG
>Mature_291_residues
TSSAGQRISCNVVETRLNDVARIFNIQRYSLNDGEGIRTVVFFKGCPHLCPWCANPESISGKIQTVRREAKCLHCAKCLR
DADECPSGAFERIGRDISLDALEREVMKDDIFFRTSGGGVTLSGGEVLMQAEFATRFLQRLRLWGVSCAIETAGDAPASK
LLPLAKLCDEVLFDLKIMDATQARDVVKMNLPRVLENLRLLVSEGVNVIPRLPLIPGFTLSRENMQQALDVLIPLNIRQI
HLLPFHQYGEPKYRLLGKTWSMKDVAAPSSADVATMREMAERAGFQVTVGG

Specific function: Activation of pyruvate formate-lyase 2 under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine [H]

COG id: COG1180

COG function: function code O; Pyruvate-formate lyase-activating enzyme

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Escherichia coli, GI1790389, Length=292, Percent_Identity=98.2876712328767, Blast_Score=591, Evalue=1e-170,
Organism=Escherichia coli, GI226510931, Length=301, Percent_Identity=35.2159468438538, Blast_Score=130, Evalue=8e-32,
Organism=Escherichia coli, GI1787130, Length=274, Percent_Identity=25.9124087591241, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1790839, Length=254, Percent_Identity=23.2283464566929, Blast_Score=61, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR006638
- InterPro:   IPR012839
- InterPro:   IPR011352
- InterPro:   IPR001989
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: =1.97.1.4 [H]

Molecular weight: Translated: 32380; Mature: 32249

Theoretical pI: Translated: 7.89; Mature: 7.89

Prosite motif: PS01087 RADICAL_ACTIVATING

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSAGQRISCNVVETRLNDVARIFNIQRYSLNDGEGIRTVVFFKGCPHLCPWCANPESI
CCCCCCCEEEHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEEECCCCCCCCCCCCCHHC
SGKIQTVRREAKCLHCAKCLRDADECPSGAFERIGRDISLDALEREVMKDDIFFRTSGGG
CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHCCEEEEECCCC
VTLSGGEVLMQAEFATRFLQRLRLWGVSCAIETAGDAPASKLLPLAKLCDEVLFDLKIMD
EEEECCCEEEEHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCC
ATQARDVVKMNLPRVLENLRLLVSEGVNVIPRLPLIPGFTLSRENMQQALDVLIPLNIRQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEE
IHLLPFHQYGEPKYRLLGKTWSMKDVAAPSSADVATMREMAERAGFQVTVGG
EEEEECHHCCCCCEEEECCCCCCHHCCCCCCCHHHHHHHHHHHCCCEEEECC
>Mature Secondary Structure 
TSSAGQRISCNVVETRLNDVARIFNIQRYSLNDGEGIRTVVFFKGCPHLCPWCANPESI
CCCCCCEEEHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEEECCCCCCCCCCCCCHHC
SGKIQTVRREAKCLHCAKCLRDADECPSGAFERIGRDISLDALEREVMKDDIFFRTSGGG
CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHCCEEEEECCCC
VTLSGGEVLMQAEFATRFLQRLRLWGVSCAIETAGDAPASKLLPLAKLCDEVLFDLKIMD
EEEECCCEEEEHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCC
ATQARDVVKMNLPRVLENLRLLVSEGVNVIPRLPLIPGFTLSRENMQQALDVLIPLNIRQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEE
IHLLPFHQYGEPKYRLLGKTWSMKDVAAPSSADVATMREMAERAGFQVTVGG
EEEEECHHCCCCCEEEECCCCCCHHCCCCCCCHHHHHHHHHHHCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503; 7773398 [H]