| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is frwB [H]
Identifier: 82546301
GI number: 82546301
Start: 4002456
End: 4002776
Strand: Direct
Name: frwB [H]
Synonym: SBO_3969
Alternate gene names: 82546301
Gene position: 4002456-4002776 (Clockwise)
Preceding gene: 82546300
Following gene: 82546302
Centisome position: 88.55
GC content: 49.53
Gene sequence:
>321_bases ATGACGAAAATTATTGCAGTAACCGCATGTCCTTCAGGTGTTGCCCATACCTATATGGCAGCAGAGGCGCGGGAAAGTGC CGCGAAAGCGAAAGGCTGGGAAGTGAAAGTAGAAACCCAGGGGTCAATTGGTCTGGAAAATGAACTGACTGCGGAAGATG TGGCGAGCGCTGATATGGTGATTCTGACCAAAGATATCGGCATCAAGTTTGAAGAGCGTTTTGCTGGCAAGACCATCGTG CGCGTCAACATCAGCGATGCAGTAAAACGTGCTGACGCCATTATGAGCAAAATTGAAGCTCACCTGGCGCAAACCGCTTA A
Upstream 100 bases:
>100_bases ACGTGCTGAAAAGTCTGGCGCGTAAAAATGGGTCTTCGACTGATGAAAAAGAAGACGACCTGGATTTGGATTTTGAAATT AATTAATTGAGGAACGAGCC
Downstream 100 bases:
>100_bases GTTCTTCTCCCGCTCGCAAGGGCGGGTTCGCTTTCCCACAGGAGTTCCTCATGACGAATCGTATCTCTCGCCTCAAAACT GCACTGTTTGCCAATACCCG
Product: PTS system fructose-like transporter subunit EIIB
Products: NA
Alternate protein names: PTS system fructose-like EIIB component 2 [H]
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MTKIIAVTACPSGVAHTYMAAEARESAAKAKGWEVKVETQGSIGLENELTAEDVASADMVILTKDIGIKFEERFAGKTIV RVNISDAVKRADAIMSKIEAHLAQTA
Sequences:
>Translated_106_residues MTKIIAVTACPSGVAHTYMAAEARESAAKAKGWEVKVETQGSIGLENELTAEDVASADMVILTKDIGIKFEERFAGKTIV RVNISDAVKRADAIMSKIEAHLAQTA >Mature_105_residues TKIIAVTACPSGVAHTYMAAEARESAAKAKGWEVKVETQGSIGLENELTAEDVASADMVILTKDIGIKFEERFAGKTIVR VNISDAVKRADAIMSKIEAHLAQTA
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane [H]
COG id: COG1445
COG function: function code G; Phosphotransferase system fructose-specific component IIB
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI1790387, Length=106, Percent_Identity=99.0566037735849, Blast_Score=209, Evalue=4e-56, Organism=Escherichia coli, GI1788492, Length=88, Percent_Identity=53.4090909090909, Blast_Score=98, Evalue=9e-23, Organism=Escherichia coli, GI87082348, Length=98, Percent_Identity=48.9795918367347, Blast_Score=97, Evalue=2e-22, Organism=Escherichia coli, GI1788730, Length=101, Percent_Identity=44.5544554455446, Blast_Score=95, Evalue=1e-21, Organism=Escherichia coli, GI1790390, Length=98, Percent_Identity=42.8571428571429, Blast_Score=83, Evalue=3e-18, Organism=Escherichia coli, GI1786951, Length=94, Percent_Identity=42.5531914893617, Blast_Score=80, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013011 - InterPro: IPR003501 - InterPro: IPR003353 [H]
Pfam domain/function: PF02302 PTS_IIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 11291; Mature: 11160
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: PS51099 PTS_EIIB_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKIIAVTACPSGVAHTYMAAEARESAAKAKGWEVKVETQGSIGLENELTAEDVASADMV CCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHCCCCEE ILTKDIGIKFEERFAGKTIVRVNISDAVKRADAIMSKIEAHLAQTA EEEECCCCEEHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TKIIAVTACPSGVAHTYMAAEARESAAKAKGWEVKVETQGSIGLENELTAEDVASADMV CEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHCCCCEE ILTKDIGIKFEERFAGKTIVRVNISDAVKRADAIMSKIEAHLAQTA EEEECCCCEEHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]