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The map label for this gene is yijF [H]

Identifier: 82546296

GI number: 82546296

Start: 3995873

End: 3996490

Strand: Reverse

Name: yijF [H]

Synonym: SBO_3964

Alternate gene names: 82546296

Gene position: 3996490-3995873 (Counterclockwise)

Preceding gene: 161984810

Following gene: 82546290

Centisome position: 88.42

GC content: 52.75

Gene sequence:

>618_bases
ATGAAAGCTTCACTGGCGCTGCTCAGCCTGCTAACGGCATTTACCAGCCACTCCTTAAAATCTCCCGCCGTTCCACCAAC
CGTGGTACAAATCCAGGCCAATACCAACCTTGCCATCGCAGACGGTGCCAGACAGCAAATCGGCAACACGCTATTTTACG
ATCCGGCGTATGTGCGGCTTACCTATCCTGGCGGTGATGTCCCGCAAGAACGCGGTGTATGTTCCGATGTGGTGATCCGT
GCATTGCGCAGCCAGAAGGTCGATTTGCAGAAACTGGTTCACGAAGATATGGCGAAGAATTTTGCCGAGTACCCGCAAAA
ATGGAAGTTAAAGCGCCCGGACAGCAACATCGATCACCGTCGGGTGCCTAATCTGGAAACCTGGTTTAGCCGCCACAACA
AAACACGCCCCATCAGTAAAAATGCCGGTGACTATCAAGCGGGCGATATTGTCTCCTGGCGATTAGATAACGGGCTGGCG
CATATTGGGGTGGTGTCAGATGGCTTCGCCCGCGACGGTACGCCACTGGTGATACATAACATTGGCGCAGGCGCGCAGGA
AGAAGATGTGCTGTTTAGCTGGCGGATGGTGGGGCATTATCGTTATTTTGTTAAATAA

Upstream 100 bases:

>100_bases
TGTTCAGGAGTTTTTTATCCGCTTCTGGACATTTTCTCTACAGAACAATCGTTAGCCCGGAAGGTCGAATCTGTGACTCT
TATTTTCACGGACGAACCAG

Downstream 100 bases:

>100_bases
GCGATCGCCCCACATGAAGAAAAAATTCAGATGCTTTTTACACTGACAGCTTCTTTTTTCTTACGGCTCACCAGCGCCAG
TGCCAGCACAATCAGCACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MKASLALLSLLTAFTSHSLKSPAVPPTVVQIQANTNLAIADGARQQIGNTLFYDPAYVRLTYPGGDVPQERGVCSDVVIR
ALRSQKVDLQKLVHEDMAKNFAEYPQKWKLKRPDSNIDHRRVPNLETWFSRHNKTRPISKNAGDYQAGDIVSWRLDNGLA
HIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFSWRMVGHYRYFVK

Sequences:

>Translated_205_residues
MKASLALLSLLTAFTSHSLKSPAVPPTVVQIQANTNLAIADGARQQIGNTLFYDPAYVRLTYPGGDVPQERGVCSDVVIR
ALRSQKVDLQKLVHEDMAKNFAEYPQKWKLKRPDSNIDHRRVPNLETWFSRHNKTRPISKNAGDYQAGDIVSWRLDNGLA
HIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFSWRMVGHYRYFVK
>Mature_205_residues
MKASLALLSLLTAFTSHSLKSPAVPPTVVQIQANTNLAIADGARQQIGNTLFYDPAYVRLTYPGGDVPQERGVCSDVVIR
ALRSQKVDLQKLVHEDMAKNFAEYPQKWKLKRPDSNIDHRRVPNLETWFSRHNKTRPISKNAGDYQAGDIVSWRLDNGLA
HIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFSWRMVGHYRYFVK

Specific function: Unknown

COG id: COG3738

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790380, Length=205, Percent_Identity=96.5853658536585, Blast_Score=396, Evalue=1e-112,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009706
- ProDom:   PD357862 [H]

Pfam domain/function: PF06940 DUF1287 [H]

EC number: NA

Molecular weight: Translated: 22938; Mature: 22938

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKASLALLSLLTAFTSHSLKSPAVPPTVVQIQANTNLAIADGARQQIGNTLFYDPAYVRL
CCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEECCHHHHHCCEEEECCEEEEE
TYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMAKNFAEYPQKWKLKRPDSNIDHR
ECCCCCCCHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCC
RVPNLETWFSRHNKTRPISKNAGDYQAGDIVSWRLDNGLAHIGVVSDGFARDGTPLVIHN
CCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCEEEEE
IGAGAQEEDVLFSWRMVGHYRYFVK
CCCCCCCCHHEEEEEEEHEEEEEEC
>Mature Secondary Structure
MKASLALLSLLTAFTSHSLKSPAVPPTVVQIQANTNLAIADGARQQIGNTLFYDPAYVRL
CCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEECCHHHHHCCEEEECCEEEEE
TYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMAKNFAEYPQKWKLKRPDSNIDHR
ECCCCCCCHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCC
RVPNLETWFSRHNKTRPISKNAGDYQAGDIVSWRLDNGLAHIGVVSDGFARDGTPLVIHN
CCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCEEEEE
IGAGAQEEDVLFSWRMVGHYRYFVK
CCCCCCCCHHEEEEEEEHEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]