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The map label for this gene is yiiS [H]

Identifier: 82546271

GI number: 82546271

Start: 3966542

End: 3966841

Strand: Direct

Name: yiiS [H]

Synonym: SBO_3939

Alternate gene names: 82546271

Gene position: 3966542-3966841 (Clockwise)

Preceding gene: 82546270

Following gene: 82546272

Centisome position: 87.76

GC content: 46.67

Gene sequence:

>300_bases
ATGAAAGATGTCGTAGATAAATGCAGTACTAAAGGATGTGCGATTGATATCGGTACGGTGATTGATAACGACAACTGTAC
CAGTAAGTTTTTGCGCTTTTTTGCCACCCGCGAAGAAGCAGAGTCTTTTATGACCAAACTGAAAGAGCTTGCCGCCGCTG
CATCCTCTGCAGATGAAGGGGCCAGCGTGGCCTACAAGATTAAGGATCTGGAGGGGCAAGTTGAGCTTGATGCGGCCTTC
ACTTTCTCATGCCAGGCCGAGATGATTATTTTTGAGTTATCACTGCGTTCGTTAGCTTGA

Upstream 100 bases:

>100_bases
AAATGGTAATCCATAAGATCATTACTTGTTTGTTCTTCCCTTAACGGCGCATTATTCTTAAGTCGTAATCGACAGAGAGG
CGAATATACAGAGGTGCCCT

Downstream 100 bases:

>100_bases
TGGAGTTGCTTTAGAAGGAGTTAAACATGGCTTATAAACACATTGGCGTGGCAATTTCCGGGAATGAAGAAGATGCCTTA
CTGGTGAATAAAGCTCTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MKDVVDKCSTKGCAIDIGTVIDNDNCTSKFLRFFATREEAESFMTKLKELAAAASSADEGASVAYKIKDLEGQVELDAAF
TFSCQAEMIIFELSLRSLA

Sequences:

>Translated_99_residues
MKDVVDKCSTKGCAIDIGTVIDNDNCTSKFLRFFATREEAESFMTKLKELAAAASSADEGASVAYKIKDLEGQVELDAAF
TFSCQAEMIIFELSLRSLA
>Mature_99_residues
MKDVVDKCSTKGCAIDIGTVIDNDNCTSKFLRFFATREEAESFMTKLKELAAAASSADEGASVAYKIKDLEGQVELDAAF
TFSCQAEMIIFELSLRSLA

Specific function: Unknown

COG id: COG3691

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0381 family [H]

Homologues:

Organism=Escherichia coli, GI1790357, Length=99, Percent_Identity=97.979797979798, Blast_Score=193, Evalue=2e-51,
Organism=Escherichia coli, GI87082087, Length=84, Percent_Identity=41.6666666666667, Blast_Score=70, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005272 [H]

Pfam domain/function: PF04175 DUF406 [H]

EC number: NA

Molecular weight: Translated: 10772; Mature: 10772

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDVVDKCSTKGCAIDIGTVIDNDNCTSKFLRFFATREEAESFMTKLKELAAAASSADEG
CCCHHHHHCCCCCEEEECEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
ASVAYKIKDLEGQVELDAAFTFSCQAEMIIFELSLRSLA
CEEEEEEECCCCEEEEEEEEEEECCCEEEEEEEEHHHCC
>Mature Secondary Structure
MKDVVDKCSTKGCAIDIGTVIDNDNCTSKFLRFFATREEAESFMTKLKELAAAASSADEG
CCCHHHHHCCCCCEEEECEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
ASVAYKIKDLEGQVELDAAFTFSCQAEMIIFELSLRSLA
CEEEEEEECCCCEEEEEEEEEEECCCEEEEEEEEHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8346018; 9278503 [H]