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The map label for this gene is yphB [C]

Identifier: 82546230

GI number: 82546230

Start: 3925531

End: 3926418

Strand: Direct

Name: yphB [C]

Synonym: SBO_3898

Alternate gene names: 82546230

Gene position: 3925531-3926418 (Clockwise)

Preceding gene: 82546229

Following gene: 161984814

Centisome position: 86.85

GC content: 49.89

Gene sequence:

>888_bases
ATGAAAACTGAACGAAAAAACGAGCATTACCTGGCGCTACAACAGGCGTTTGACGCGCCATGGCCTGGGCCTGTAGGAGA
GTTAGTGACGCTGGAAAAAGGCAATATTCACCTGCAGATTTATCCGCATGATGGTGCCAGGATAACCTCGTTAAAGGCAT
TTGGTTCTGAAGTATTACGCCAATGGCAGCCGCAGCGCAGAGCTTTTCAGTATGGCTGTTTCCCAATGGTGCCGTGGGCA
GGGCGACTGGGGAATGCGACGCTGAATGCTGGTGGGCAATGTTATTCTTTACCCGCCAATAAACCACCACATGCGTTGCA
TGGTATGGCTTGTTACTCAACGTGGGAAATCATCGACAAAACAGCAGATTCCCTGACTTTACGTATGCCCCTGGCTTCAC
CGTGGCCCTGGCAAGGGGAAGTGATTCAGACTTTTTTGCTGGAGAACGATGCGCTGGTTTTGCAACTGGAAGTCCATTCA
TATGCCGATACATTCCCGGCCTCCGCTGGCTGGCATCCGTGGTTTGCGAAAAAGCTGACTCCGCAAAATACAGAATCGTT
GCAGGTGCTTTTTGATGCGGACTGGCAAGAAGAAGCGGGTAGTGATGAACTGCCAACTGGAAATCGTATCTCTCCTCAAG
CCGGTCCCTGGGATGACTGTTTTGGTTTTTATAACGGGGTGAAGGTTAAGTTACTGTGGCCTGGTAAACTCGCGATGACC
ATGATCTCTTCTGCAAACAGTCTGGTGGTATTTGATAAACAGCCCGATGCCACCTGTATTAACCCGCTGACTCAGGCACC
TAACGCAATAAATCTAACGCCGGAATTGGTGACACCAGATAGGCCGCTGGTCATCGAAACTCGTTGGCAATTTACACCTG
AATCTTAA

Upstream 100 bases:

>100_bases
TTATTTGCTGTCTCAGTTCTTTCCTTTGTTTGCGTCTGGCTGATTGAGCCGACCGATGAACAAGAAACCGCTTCTTACCG
CTACATCAGGGAACAATCTC

Downstream 100 bases:

>100_bases
CCATTCATCTATTGCGAAAAAGCCAGTGAAATTACTCTGCTTTTTCGCAATCAGCATCACAAGATTACCCTTATTGCCAC
ATAGCCAAACCCATCCTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: Aldose-1-Epimerase; Galactose Mutarotase-Like Protein; Epimerase; Aldose 1-Epimerase Subfamily; Aldose 1-Epimerase Family Protein

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MKTERKNEHYLALQQAFDAPWPGPVGELVTLEKGNIHLQIYPHDGARITSLKAFGSEVLRQWQPQRRAFQYGCFPMVPWA
GRLGNATLNAGGQCYSLPANKPPHALHGMACYSTWEIIDKTADSLTLRMPLASPWPWQGEVIQTFLLENDALVLQLEVHS
YADTFPASAGWHPWFAKKLTPQNTESLQVLFDADWQEEAGSDELPTGNRISPQAGPWDDCFGFYNGVKVKLLWPGKLAMT
MISSANSLVVFDKQPDATCINPLTQAPNAINLTPELVTPDRPLVIETRWQFTPES

Sequences:

>Translated_295_residues
MKTERKNEHYLALQQAFDAPWPGPVGELVTLEKGNIHLQIYPHDGARITSLKAFGSEVLRQWQPQRRAFQYGCFPMVPWA
GRLGNATLNAGGQCYSLPANKPPHALHGMACYSTWEIIDKTADSLTLRMPLASPWPWQGEVIQTFLLENDALVLQLEVHS
YADTFPASAGWHPWFAKKLTPQNTESLQVLFDADWQEEAGSDELPTGNRISPQAGPWDDCFGFYNGVKVKLLWPGKLAMT
MISSANSLVVFDKQPDATCINPLTQAPNAINLTPELVTPDRPLVIETRWQFTPES
>Mature_295_residues
MKTERKNEHYLALQQAFDAPWPGPVGELVTLEKGNIHLQIYPHDGARITSLKAFGSEVLRQWQPQRRAFQYGCFPMVPWA
GRLGNATLNAGGQCYSLPANKPPHALHGMACYSTWEIIDKTADSLTLRMPLASPWPWQGEVIQTFLLENDALVLQLEVHS
YADTFPASAGWHPWFAKKLTPQNTESLQVLFDADWQEEAGSDELPTGNRISPQAGPWDDCFGFYNGVKVKLLWPGKLAMT
MISSANSLVVFDKQPDATCINPLTQAPNAINLTPELVTPDRPLVIETRWQFTPES

Specific function: Unknown

COG id: COG2017

COG function: function code G; Galactose mutarotase and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788894, Length=263, Percent_Identity=26.615969581749, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32984; Mature: 32984

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTERKNEHYLALQQAFDAPWPGPVGELVTLEKGNIHLQIYPHDGARITSLKAFGSEVLR
CCCCCCCCCEEEEHHHHCCCCCCCCCCEEEEECCCEEEEEEECCCCEEEHHHHHHHHHHH
QWQPQRRAFQYGCFPMVPWAGRLGNATLNAGGQCYSLPANKPPHALHGMACYSTWEIIDK
HCCCHHHHHCCCCEECCCCCCCCCCEEECCCCEEEECCCCCCCHHHHCCHHHHHHHHHHC
TADSLTLRMPLASPWPWQGEVIQTFLLENDALVLQLEVHSYADTFPASAGWHPWFAKKLT
CCCCEEEEECCCCCCCCCHHHHHHEEECCCEEEEEEEECCCCCCCCCCCCCCCHHHHCCC
PQNTESLQVLFDADWQEEAGSDELPTGNRISPQAGPWDDCFGFYNGVKVKLLWPGKLAMT
CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEEEECCHHEEH
MISSANSLVVFDKQPDATCINPLTQAPNAINLTPELVTPDRPLVIETRWQFTPES
HHCCCCEEEEEECCCCCHHHCHHHCCCCEEECCCCEECCCCCEEEEEEECCCCCC
>Mature Secondary Structure
MKTERKNEHYLALQQAFDAPWPGPVGELVTLEKGNIHLQIYPHDGARITSLKAFGSEVLR
CCCCCCCCCEEEEHHHHCCCCCCCCCCEEEEECCCEEEEEEECCCCEEEHHHHHHHHHHH
QWQPQRRAFQYGCFPMVPWAGRLGNATLNAGGQCYSLPANKPPHALHGMACYSTWEIIDK
HCCCHHHHHCCCCEECCCCCCCCCCEEECCCCEEEECCCCCCCHHHHCCHHHHHHHHHHC
TADSLTLRMPLASPWPWQGEVIQTFLLENDALVLQLEVHSYADTFPASAGWHPWFAKKLT
CCCCEEEEECCCCCCCCCHHHHHHEEECCCEEEEEEEECCCCCCCCCCCCCCCHHHHCCC
PQNTESLQVLFDADWQEEAGSDELPTGNRISPQAGPWDDCFGFYNGVKVKLLWPGKLAMT
CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEEEECCHHEEH
MISSANSLVVFDKQPDATCINPLTQAPNAINLTPELVTPDRPLVIETRWQFTPES
HHCCCCEEEEEECCCCCHHHCHHHCCCCEEECCCCEECCCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA