| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
Click here to switch to the map view.
The map label for this gene is tatA [H]
Identifier: 82546189
GI number: 82546189
Start: 3875339
End: 3875650
Strand: Direct
Name: tatA [H]
Synonym: SBO_3850
Alternate gene names: 82546189
Gene position: 3875339-3875650 (Clockwise)
Preceding gene: 82546188
Following gene: 161984818
Centisome position: 85.74
GC content: 44.87
Gene sequence:
>312_bases ATGCGGCTTTGTTTAATCATCATCTACCACAGAGGAACATGTATGGGTGGTATCAGTATTTGGCAGTTATTGATTATTGC CGTCATCGTTGTACTGCTTTTTGGCACCAAAAAGCTCGGCTCCATCGGTTCCGATCTTGGTGCGTCGATCAAAGGCTTTA AAAAAGCAATGAGCGATGATGAACCAAAGCAGGATAAAACCAGTCAGGATGCTGATTTTACTGCGAAAACTATCGCCGAT AAGCAGGCGGATACGAATCAGGAACAGGCTAAAACAGAAGACGCGAAGCGCCACGATAAAGAGCAGGTGTAA
Upstream 100 bases:
>100_bases GCCCGGCTGGTTAATGGCAGGTGGTCTGATCGCCTGGTTTGTCGGTTGGCGCAAAACACGCTGATTTTTTCATCGCTCAA GGCGGGCCGTGTAACGTATA
Downstream 100 bases:
>100_bases TCCGTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCGTTCTGGGGCCGCAACGACTGCC TGTGGCGGTAAAAACGGTAG
Product: twin arginine translocase protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MRLCLIIIYHRGTCMGGISIWQLLIIAVIVVLLFGTKKLGSIGSDLGASIKGFKKAMSDDEPKQDKTSQDADFTAKTIAD KQADTNQEQAKTEDAKRHDKEQV
Sequences:
>Translated_103_residues MRLCLIIIYHRGTCMGGISIWQLLIIAVIVVLLFGTKKLGSIGSDLGASIKGFKKAMSDDEPKQDKTSQDADFTAKTIAD KQADTNQEQAKTEDAKRHDKEQV >Mature_103_residues MRLCLIIIYHRGTCMGGISIWQLLIIAVIVVLLFGTKKLGSIGSDLGASIKGFKKAMSDDEPKQDKTSQDADFTAKTIAD KQADTNQEQAKTEDAKRHDKEQV
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG1826
COG function: function code U; Sec-independent protein secretion pathway components
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatA/E family [H]
Homologues:
Organism=Escherichia coli, GI87082337, Length=89, Percent_Identity=100, Blast_Score=177, Evalue=2e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003369 - InterPro: IPR006312 [H]
Pfam domain/function: PF02416 MttA_Hcf106 [H]
EC number: NA
Molecular weight: Translated: 11338; Mature: 11338
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLCLIIIYHRGTCMGGISIWQLLIIAVIVVLLFGTKKLGSIGSDLGASIKGFKKAMSDD CCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHCCC EPKQDKTSQDADFTAKTIADKQADTNQEQAKTEDAKRHDKEQV CCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRLCLIIIYHRGTCMGGISIWQLLIIAVIVVLLFGTKKLGSIGSDLGASIKGFKKAMSDD CCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHCCC EPKQDKTSQDADFTAKTIADKQADTNQEQAKTEDAKRHDKEQV CCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]