Click here to switch to the map view.

The map label for this gene is yidR [H]

Identifier: 82546041

GI number: 82546041

Start: 3697957

End: 3698970

Strand: Direct

Name: yidR [H]

Synonym: SBO_3682

Alternate gene names: 82546041

Gene position: 3697957-3698970 (Clockwise)

Preceding gene: 82546039

Following gene: 82546043

Centisome position: 81.82

GC content: 54.83

Gene sequence:

>1014_bases
GTGGTTCATCCGAAGTCAGAGAAATATGTTTTCATCCATGGCCCGGAAAATCCTGATGAAACATGGTATTACGATTTCCA
TCATCGACGCGGAGTCATTGCTGAAGGCGGCAAGGTGAGCAATCTCGATGCAATGGATATTACCGCGCCGTATACGCCAG
GAGCGCTGCGCGGCGGCAGCCATGTGCATGTCTTTAGCCCGAACGGTGAAAGGGTGAGCTTTACCTATAACGACCATGTA
ATGCATGAACTCGATCCGGCGCTGGATTTGCGAAACGTCGGTGTTGCTGCGCCGTTTGGCCCGGTCAACGTACAAAAGCA
GCATCCGCGTGAATACAGCGGTAGCCACTGGTGCGTGCTGGTGAGTAAAACCACGCCCACGCCGCAGCCTGGCAGCGATG
AAATCAATCGTGCTTATGAAGAAGGATGGGTAGGAAATCACGCGCTGGCGTTTATTGGCGACACACTTTCGCCAAAGGGC
GAGAAAGTGCCGGAGCTGTTTATCGTTGAGTTACCGCAAGATGAAGCTGGCTGGAAAGCGGCAGGTGATGCGCCGTTAAG
TGGAACGGAAACCACCCTGCCCGCGCCACCGCGCGGCGTCGTGCAGCGACGTTTAACCTTTACCCACCATCGGGCTTATC
CGGGGTTAGTCAACGTCCCGCGCCACTGGGTGCGCTGTAATCCGCAGGGTACGCAAATCGCGTTTTTAATGCGTGATGAT
AACGGCATTGTGCAACTGTGGCTTATCTCGCCACAGGGCGGCGAGCCGCGCCAGTTAACCCATAACAAAACGGATATTCA
GTCTGCATTTAACTGGCATCCGTCAGGAGAATGGTTGGGCTTTGTGCTGGATAATCGAATTGCTTGTGCCCATGCGCAAA
GTGGCGAGGTTGAGTATTTAACCGAAAGCCACGCCAATCCACCTTCTGCGGACGCCGTGGTCTTCTCGCCGGATGGTCAA
TGGCTGGCGTGGATGGAAGGCGGCCAGCTGTGGATCACCGAAACTGATCGCTAA

Upstream 100 bases:

>100_bases
CCTTAATAAAACAGGTCCTCAGAGCATACATATTCTGCGGAGCGTGCGGCAACAACAGGACGAACAGGGGCGGTTTTCAA
TTTGCAGCCGTCAGGCTGCC

Downstream 100 bases:

>100_bases
ATCAGTTATCAGGCATTCTGGCCGGTGGAATAACCGCATTGGTGGCTTGCGCGTTGGCTTCGCTTTTTTCAACGTGTGAG
CGCACCGAGCTGTCTTTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MVHPKSEKYVFIHGPENPDETWYYDFHHRRGVIAEGGKVSNLDAMDITAPYTPGALRGGSHVHVFSPNGERVSFTYNDHV
MHELDPALDLRNVGVAAPFGPVNVQKQHPREYSGSHWCVLVSKTTPTPQPGSDEINRAYEEGWVGNHALAFIGDTLSPKG
EKVPELFIVELPQDEAGWKAAGDAPLSGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDD
NGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDNRIACAHAQSGEVEYLTESHANPPSADAVVFSPDGQ
WLAWMEGGQLWITETDR

Sequences:

>Translated_337_residues
MVHPKSEKYVFIHGPENPDETWYYDFHHRRGVIAEGGKVSNLDAMDITAPYTPGALRGGSHVHVFSPNGERVSFTYNDHV
MHELDPALDLRNVGVAAPFGPVNVQKQHPREYSGSHWCVLVSKTTPTPQPGSDEINRAYEEGWVGNHALAFIGDTLSPKG
EKVPELFIVELPQDEAGWKAAGDAPLSGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDD
NGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDNRIACAHAQSGEVEYLTESHANPPSADAVVFSPDGQ
WLAWMEGGQLWITETDR
>Mature_337_residues
MVHPKSEKYVFIHGPENPDETWYYDFHHRRGVIAEGGKVSNLDAMDITAPYTPGALRGGSHVHVFSPNGERVSFTYNDHV
MHELDPALDLRNVGVAAPFGPVNVQKQHPREYSGSHWCVLVSKTTPTPQPGSDEINRAYEEGWVGNHALAFIGDTLSPKG
EKVPELFIVELPQDEAGWKAAGDAPLSGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDD
NGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDNRIACAHAQSGEVEYLTESHANPPSADAVVFSPDGQ
WLAWMEGGQLWITETDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI308199520, Length=336, Percent_Identity=98.2142857142857, Blast_Score=688, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR022223 [H]

Pfam domain/function: PF12566 DUF3748 [H]

EC number: NA

Molecular weight: Translated: 37449; Mature: 37449

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVHPKSEKYVFIHGPENPDETWYYDFHHRRGVIAEGGKVSNLDAMDITAPYTPGALRGGS
CCCCCCCCEEEEECCCCCCCCEEEEECCCCCEEECCCEECCCCEEEEECCCCCCCCCCCC
HVHVFSPNGERVSFTYNDHVMHELDPALDLRNVGVAAPFGPVNVQKQHPREYSGSHWCVL
EEEEECCCCCEEEEEECCCCHHHCCCCCCHHHCCEECCCCCCCCCCCCCCCCCCCEEEEE
VSKTTPTPQPGSDEINRAYEEGWVGNHALAFIGDTLSPKGEKVPELFIVELPQDEAGWKA
EECCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCC
AGDAPLSGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDD
CCCCCCCCCCCCCCCCCHHHHHHHHHEEECCCCCCCCCCCCEEEEECCCCCEEEEEEECC
NGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDNRIACAHAQSGEVEYL
CCEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCEEEEEECCCCCEEEE
TESHANPPSADAVVFSPDGQWLAWMEGGQLWITETDR
ECCCCCCCCCCEEEECCCCCEEEEEECCEEEEEECCC
>Mature Secondary Structure
MVHPKSEKYVFIHGPENPDETWYYDFHHRRGVIAEGGKVSNLDAMDITAPYTPGALRGGS
CCCCCCCCEEEEECCCCCCCCEEEEECCCCCEEECCCEECCCCEEEEECCCCCCCCCCCC
HVHVFSPNGERVSFTYNDHVMHELDPALDLRNVGVAAPFGPVNVQKQHPREYSGSHWCVL
EEEEECCCCCEEEEEECCCCHHHCCCCCCHHHCCEECCCCCCCCCCCCCCCCCCCEEEEE
VSKTTPTPQPGSDEINRAYEEGWVGNHALAFIGDTLSPKGEKVPELFIVELPQDEAGWKA
EECCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCC
AGDAPLSGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDD
CCCCCCCCCCCCCCCCCHHHHHHHHHEEECCCCCCCCCCCCEEEEECCCCCEEEEEEECC
NGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDNRIACAHAQSGEVEYL
CCEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCEEEEEECCCCCEEEE
TESHANPPSADAVVFSPDGQWLAWMEGGQLWITETDR
ECCCCCCCCCCEEEECCCCCEEEEEECCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]