| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is yieG [H]
Identifier: 82546021
GI number: 82546021
Start: 3676548
End: 3677885
Strand: Direct
Name: yieG [H]
Synonym: SBO_3661
Alternate gene names: 82546021
Gene position: 3676548-3677885 (Clockwise)
Preceding gene: 82546020
Following gene: 82546028
Centisome position: 81.34
GC content: 53.06
Gene sequence:
>1338_bases ATGAGTCAACAACACACAACCCAGGCTTCTGGCCAGGGGATGCTGGAACGCGTGTTTAAACTGCGCGAACATGGCACGAC GGCACGGACCGAAGTGATCGCCGGTTTTACCACCTTCCTGACGATGGTTTACATCGTTTTTGTTAACCCACAAATTCTGG GCGTTGCTGGCATGGACACCAGTGCCGTCTTCGTAACAACCTGTCTGATTGCTGCTTTCGGTAGCATTATGATGGGATTG TTTGCAAACCTTCCGGTGGCGCTGGCTCCTGCGATGGGGCTTAACGCCTTTTTCGCTTTTGTGGTTGTCCAGGCAATGGG GCTGCCGTGGCAGATCGGTATGGGCGCAATCTTCTGGGGCGCTGTCGGACTGCTTCTTTTGACCATTTTCCGCGTTCGTT ACTGGATGATTGCTAACATTCCGGTAAGTCTGCGTGTGGGTATTACCAGCGGTATCGGCCTGTTTATCGGCATGATGGGG CTGAAAAACGCAGGTGTGATTGTCGCTAACTCGGAAACGCTGGTGAGCATCGGTAATCTGACTTCTCACAGCGTACTTCT GGGTATCCTCGGCTTCTTCATCATTGCTATTCTGGCCTCGCGCAACATTCACGCAGCGGTGCTGGTTTCTATCGTGGTGA CGACGCTGCTGGGCTGGATGCTGGGTGATGTGCACTACAATGGCATCGTTTCTGCGCCGCCGAGCGTAATGACAGTTGTG GGTCATGTAGATTTAGCCGGGTCGTTTAACCTCGGGCTGGCAGGGGTGATTTTCTCTTTCATGTTGGTCAACTTGTTTGA CTCCTCCGGTACGCTGATTGGCGTGACCGATAAAGCAGGTCTGGCGGATGAGAAGGGGAAATTCCCGCGCATGAAGCAAG CGCTGTATGTCGACAGTATCTCTTCCGTGACCGGTTCGTTTATCGGTACTTCTTCCGTTACGGCTTATATTGAGTCCTCT TCCGGCGTATCGGTTGGCGGTCGTACCGGTCTGACGGCAGTGGTTGTTGGTCTGCTGTTCCTGCTGGTTATCTTTCTGTC GCCGCTGGCGGGAATGGTGCCAGGCTACGCTGCAGCTGGCGCGTTGATCTACGTTGGCGTGTTGATGACCTCAAGTCTTG CTCGCGTGAACTGGCAGGATCTTACTGAATCTGTTCCGGCGTTTATTACCGCCGTGATGATGCCGTTCAGCTTTTCGATT ACCGAAGGTATTGCGCTGGGCTTTATCTCCTACTGCGTGATGAAGATTGGTACCGGGCGTCTGCGTGACCTTAGCCCGTG CGTAATCATCGTTGCGCTGCTGTTTATCCTGAAGATTGTATTTATCGACGCTCATTAA
Upstream 100 bases:
>100_bases GTCGTTCTCAAAATCGGTGGAGCTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAG TCATTACCCGGAAATAGATA
Downstream 100 bases:
>100_bases AATCGATAGCGCATTAAAAACCCGCCATGCATGATTACTGGCGGGTTTTTTATTTAGATCTTAACTCGCTGAATAAACTC ACCAAATGCGGTCAATTGCC
Product: membrane/transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 445; Mature: 444
Protein sequence:
>445_residues MSQQHTTQASGQGMLERVFKLREHGTTARTEVIAGFTTFLTMVYIVFVNPQILGVAGMDTSAVFVTTCLIAAFGSIMMGL FANLPVALAPAMGLNAFFAFVVVQAMGLPWQIGMGAIFWGAVGLLLLTIFRVRYWMIANIPVSLRVGITSGIGLFIGMMG LKNAGVIVANSETLVSIGNLTSHSVLLGILGFFIIAILASRNIHAAVLVSIVVTTLLGWMLGDVHYNGIVSAPPSVMTVV GHVDLAGSFNLGLAGVIFSFMLVNLFDSSGTLIGVTDKAGLADEKGKFPRMKQALYVDSISSVTGSFIGTSSVTAYIESS SGVSVGGRTGLTAVVVGLLFLLVIFLSPLAGMVPGYAAAGALIYVGVLMTSSLARVNWQDLTESVPAFITAVMMPFSFSI TEGIALGFISYCVMKIGTGRLRDLSPCVIIVALLFILKIVFIDAH
Sequences:
>Translated_445_residues MSQQHTTQASGQGMLERVFKLREHGTTARTEVIAGFTTFLTMVYIVFVNPQILGVAGMDTSAVFVTTCLIAAFGSIMMGL FANLPVALAPAMGLNAFFAFVVVQAMGLPWQIGMGAIFWGAVGLLLLTIFRVRYWMIANIPVSLRVGITSGIGLFIGMMG LKNAGVIVANSETLVSIGNLTSHSVLLGILGFFIIAILASRNIHAAVLVSIVVTTLLGWMLGDVHYNGIVSAPPSVMTVV GHVDLAGSFNLGLAGVIFSFMLVNLFDSSGTLIGVTDKAGLADEKGKFPRMKQALYVDSISSVTGSFIGTSSVTAYIESS SGVSVGGRTGLTAVVVGLLFLLVIFLSPLAGMVPGYAAAGALIYVGVLMTSSLARVNWQDLTESVPAFITAVMMPFSFSI TEGIALGFISYCVMKIGTGRLRDLSPCVIIVALLFILKIVFIDAH >Mature_444_residues SQQHTTQASGQGMLERVFKLREHGTTARTEVIAGFTTFLTMVYIVFVNPQILGVAGMDTSAVFVTTCLIAAFGSIMMGLF ANLPVALAPAMGLNAFFAFVVVQAMGLPWQIGMGAIFWGAVGLLLLTIFRVRYWMIANIPVSLRVGITSGIGLFIGMMGL KNAGVIVANSETLVSIGNLTSHSVLLGILGFFIIAILASRNIHAAVLVSIVVTTLLGWMLGDVHYNGIVSAPPSVMTVVG HVDLAGSFNLGLAGVIFSFMLVNLFDSSGTLIGVTDKAGLADEKGKFPRMKQALYVDSISSVTGSFIGTSSVTAYIESSS GVSVGGRTGLTAVVVGLLFLLVIFLSPLAGMVPGYAAAGALIYVGVLMTSSLARVNWQDLTESVPAFITAVMMPFSFSIT EGIALGFISYCVMKIGTGRLRDLSPCVIIVALLFILKIVFIDAH
Specific function: High-affinity uptake of adenine [H]
COG id: COG2252
COG function: function code R; Permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the xanthine/uracil permease family. AzgA purine transporter (TC 2.A.1.40) subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790150, Length=445, Percent_Identity=98.876404494382, Blast_Score=867, Evalue=0.0, Organism=Escherichia coli, GI87082309, Length=444, Percent_Identity=74.3243243243243, Blast_Score=662, Evalue=0.0, Organism=Escherichia coli, GI1790499, Length=439, Percent_Identity=35.0797266514806, Blast_Score=267, Evalue=9e-73, Organism=Escherichia coli, GI48994909, Length=435, Percent_Identity=35.632183908046, Blast_Score=253, Evalue=2e-68,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006043 [H]
Pfam domain/function: PF00860 Xan_ur_permease [H]
EC number: NA
Molecular weight: Translated: 46817; Mature: 46686
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: PS00267 TACHYKININ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQQHTTQASGQGMLERVFKLREHGTTARTEVIAGFTTFLTMVYIVFVNPQILGVAGMDT CCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC SAVFVTTCLIAAFGSIMMGLFANLPVALAPAMGLNAFFAFVVVQAMGLPWQIGMGAIFWG HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH AVGLLLLTIFRVRYWMIANIPVSLRVGITSGIGLFIGMMGLKNAGVIVANSETLVSIGNL HHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCCEEEECCCCEEEECCC TSHSVLLGILGFFIIAILASRNIHAAVLVSIVVTTLLGWMLGDVHYNGIVSAPPSVMTVV CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHE GHVDLAGSFNLGLAGVIFSFMLVNLFDSSGTLIGVTDKAGLADEKGKFPRMKQALYVDSI ECEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHH SSVTGSFIGTSSVTAYIESSSGVSVGGRTGLTAVVVGLLFLLVIFLSPLAGMVPGYAAAG HHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH ALIYVGVLMTSSLARVNWQDLTESVPAFITAVMMPFSFSITEGIALGFISYCVMKIGTGR HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC LRDLSPCVIIVALLFILKIVFIDAH CCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SQQHTTQASGQGMLERVFKLREHGTTARTEVIAGFTTFLTMVYIVFVNPQILGVAGMDT CCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC SAVFVTTCLIAAFGSIMMGLFANLPVALAPAMGLNAFFAFVVVQAMGLPWQIGMGAIFWG HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH AVGLLLLTIFRVRYWMIANIPVSLRVGITSGIGLFIGMMGLKNAGVIVANSETLVSIGNL HHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCCEEEECCCCEEEECCC TSHSVLLGILGFFIIAILASRNIHAAVLVSIVVTTLLGWMLGDVHYNGIVSAPPSVMTVV CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHE GHVDLAGSFNLGLAGVIFSFMLVNLFDSSGTLIGVTDKAGLADEKGKFPRMKQALYVDSI ECEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHH SSVTGSFIGTSSVTAYIESSSGVSVGGRTGLTAVVVGLLFLLVIFLSPLAGMVPGYAAAG HHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH ALIYVGVLMTSSLARVNWQDLTESVPAFITAVMMPFSFSITEGIALGFISYCVMKIGTGR HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC LRDLSPCVIIVALLFILKIVFIDAH CCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7686882; 9278503 [H]