| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is yibG [H]
Identifier: 82545956
GI number: 82545956
Start: 3607326
End: 3607787
Strand: Direct
Name: yibG [H]
Synonym: SBO_3594
Alternate gene names: 82545956
Gene position: 3607326-3607787 (Clockwise)
Preceding gene: 82545955
Following gene: 82545959
Centisome position: 79.81
GC content: 32.25
Gene sequence:
>462_bases ATGAAAGCATGCTTGTTACTATTTTTTTATTTTTCTCTTATTGATCAATTGCATGGTGCTGATGTGAAAATAAAAGAAAA CGAAAGTGTGATGGGATCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGCTGATGAAACTGAAGTATAAATCACAAC ATGGTGATTCAGAGGCATCATTTCGACTATATCAATATTACTGCTTTACTAAAAATAATATTGATAAACAATTGCGATTC TTGGAAAGATCAGCATCTCAGGGGAATGTTACAGCGCAGTTTAATTATGGGGTCTTTTTATCAGATACAAATCCAACATT ATCAGAATATTATAATTTGAATAGAGCTATTTATTGGATGGAATTCGCTGTAAATAACGGTAATATTGATGCAAAGAGCA AACTTCAAGAGCTCAAAAAGCTAAAGCGAATGGATAGAAGGAAGAATAAGGAGAATCCGTAA
Upstream 100 bases:
>100_bases ACCTTGGTAATTGGATAACATATGGGCCATCTGGGCACCCCATTTCTAATATGCAAGGTACGCCAGAAAAACCCAGTGAT ATAAGATAGGTTGTAGATGT
Downstream 100 bases:
>100_bases AAGCAATAGTTCATCAGACTGCCGCAGCAGTAGTATGATGATGAATCAGGGCTGTACTATAACTATTATCGGTAACATTA ACCGCAGCAGGGGCGGTATA
Product: hypothetical protein
Products: NA
Alternate protein names: ORF-A3 [H]
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MKACLLLFFYFSLIDQLHGADVKIKENESVMGSTAMTYDLSEEKLMKLKYKSQHGDSEASFRLYQYYCFTKNNIDKQLRF LERSASQGNVTAQFNYGVFLSDTNPTLSEYYNLNRAIYWMEFAVNNGNIDAKSKLQELKKLKRMDRRKNKENP
Sequences:
>Translated_153_residues MKACLLLFFYFSLIDQLHGADVKIKENESVMGSTAMTYDLSEEKLMKLKYKSQHGDSEASFRLYQYYCFTKNNIDKQLRF LERSASQGNVTAQFNYGVFLSDTNPTLSEYYNLNRAIYWMEFAVNNGNIDAKSKLQELKKLKRMDRRKNKENP >Mature_153_residues MKACLLLFFYFSLIDQLHGADVKIKENESVMGSTAMTYDLSEEKLMKLKYKSQHGDSEASFRLYQYYCFTKNNIDKQLRF LERSASQGNVTAQFNYGVFLSDTNPTLSEYYNLNRAIYWMEFAVNNGNIDAKSKLQELKKLKRMDRRKNKENP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790023, Length=153, Percent_Identity=96.7320261437908, Blast_Score=306, Evalue=6e-85,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011990 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17978; Mature: 17978
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKACLLLFFYFSLIDQLHGADVKIKENESVMGSTAMTYDLSEEKLMKLKYKSQHGDSEAS CHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCC FRLYQYYCFTKNNIDKQLRFLERSASQGNVTAQFNYGVFLSDTNPTLSEYYNLNRAIYWM EEEEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCEEEECCCCCHHHHHCCCEEEEEE EFAVNNGNIDAKSKLQELKKLKRMDRRKNKENP EEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKACLLLFFYFSLIDQLHGADVKIKENESVMGSTAMTYDLSEEKLMKLKYKSQHGDSEAS CHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCC FRLYQYYCFTKNNIDKQLRFLERSASQGNVTAQFNYGVFLSDTNPTLSEYYNLNRAIYWM EEEEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCEEEECCCCCHHHHHCCCEEEEEE EFAVNNGNIDAKSKLQELKKLKRMDRRKNKENP EEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8387990; 8041620; 9278503 [H]