Definition Shigella boydii Sb227, complete genome.
Accession NC_007613
Length 4,519,823

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The map label for this gene is 82545788

Identifier: 82545788

GI number: 82545788

Start: 3409239

End: 3409613

Strand: Reverse

Name: 82545788

Synonym: SBO_3420

Alternate gene names: NA

Gene position: 3409613-3409239 (Counterclockwise)

Preceding gene: 82545789

Following gene: 82545787

Centisome position: 75.44

GC content: 43.47

Gene sequence:

>375_bases
ATGCAATCCCAGGTCATGAAAAATGTCCGCATGATCTCGCCGCAGGAAACAGAAGTGGCAAGTATGATGGAGGGAATGAT
TAAAGTCGTTGCCGAATACCGTAATACAAACAACGCAATAGGTTACACCTTCCGTTATTACGCAACACAAATGAACGCCG
ATAAAAATATAAAACTGCTAGCGATTAACGGTATTGCACCGACTGCCGAAAACATTCGCAACGGCAAATATCCCTATATC
ATCGATGCCTTTATGGTAACGCGGGAAAATACGACGTCAGAGACACAAAAATTGTTGGAGTGGTTTTTAACGCCGCAGGG
ACAGAGTTTGGTGGAAGATGTAGGTTATGTCCCGATGTATAAGACGCTACCTTAA

Upstream 100 bases:

>100_bases
CATCTTCAGTGGTGCAATTACCAACTGGCGTACTGTTGGCGGTAACGATCAGGAGATCCAGACCTAGCAACGCCCGGAAG
ACTCTGGTAGCCAGACGGTG

Downstream 100 bases:

>100_bases
AGCTGGATAATAAAAATGGAATTAGTTAATACATTATTTGCAAGCCTTGCCGGTACTGATCCCTTCACAGGCGTGGATAT
TACGATTGCCAACTGCAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MQSQVMKNVRMISPQETEVASMMEGMIKVVAEYRNTNNAIGYTFRYYATQMNADKNIKLLAINGIAPTAENIRNGKYPYI
IDAFMVTRENTTSETQKLLEWFLTPQGQSLVEDVGYVPMYKTLP

Sequences:

>Translated_124_residues
MQSQVMKNVRMISPQETEVASMMEGMIKVVAEYRNTNNAIGYTFRYYATQMNADKNIKLLAINGIAPTAENIRNGKYPYI
IDAFMVTRENTTSETQKLLEWFLTPQGQSLVEDVGYVPMYKTLP
>Mature_124_residues
MQSQVMKNVRMISPQETEVASMMEGMIKVVAEYRNTNNAIGYTFRYYATQMNADKNIKLLAINGIAPTAENIRNGKYPYI
IDAFMVTRENTTSETQKLLEWFLTPQGQSLVEDVGYVPMYKTLP

Specific function: Unknown

COG id: COG0226

COG function: function code P; ABC-type phosphate transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14171; Mature: 14171

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.3 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.3 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSQVMKNVRMISPQETEVASMMEGMIKVVAEYRNTNNAIGYTFRYYATQMNADKNIKLL
CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCEEEE
AINGIAPTAENIRNGKYPYIIDAFMVTRENTTSETQKLLEWFLTPQGQSLVEDVGYVPMY
EECCCCCCHHHHCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCC
KTLP
CCCC
>Mature Secondary Structure
MQSQVMKNVRMISPQETEVASMMEGMIKVVAEYRNTNNAIGYTFRYYATQMNADKNIKLL
CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCEEEE
AINGIAPTAENIRNGKYPYIIDAFMVTRENTTSETQKLLEWFLTPQGQSLVEDVGYVPMY
EECCCCCCHHHHCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCC
KTLP
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA