| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is 82545788
Identifier: 82545788
GI number: 82545788
Start: 3409239
End: 3409613
Strand: Reverse
Name: 82545788
Synonym: SBO_3420
Alternate gene names: NA
Gene position: 3409613-3409239 (Counterclockwise)
Preceding gene: 82545789
Following gene: 82545787
Centisome position: 75.44
GC content: 43.47
Gene sequence:
>375_bases ATGCAATCCCAGGTCATGAAAAATGTCCGCATGATCTCGCCGCAGGAAACAGAAGTGGCAAGTATGATGGAGGGAATGAT TAAAGTCGTTGCCGAATACCGTAATACAAACAACGCAATAGGTTACACCTTCCGTTATTACGCAACACAAATGAACGCCG ATAAAAATATAAAACTGCTAGCGATTAACGGTATTGCACCGACTGCCGAAAACATTCGCAACGGCAAATATCCCTATATC ATCGATGCCTTTATGGTAACGCGGGAAAATACGACGTCAGAGACACAAAAATTGTTGGAGTGGTTTTTAACGCCGCAGGG ACAGAGTTTGGTGGAAGATGTAGGTTATGTCCCGATGTATAAGACGCTACCTTAA
Upstream 100 bases:
>100_bases CATCTTCAGTGGTGCAATTACCAACTGGCGTACTGTTGGCGGTAACGATCAGGAGATCCAGACCTAGCAACGCCCGGAAG ACTCTGGTAGCCAGACGGTG
Downstream 100 bases:
>100_bases AGCTGGATAATAAAAATGGAATTAGTTAATACATTATTTGCAAGCCTTGCCGGTACTGATCCCTTCACAGGCGTGGATAT TACGATTGCCAACTGCAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MQSQVMKNVRMISPQETEVASMMEGMIKVVAEYRNTNNAIGYTFRYYATQMNADKNIKLLAINGIAPTAENIRNGKYPYI IDAFMVTRENTTSETQKLLEWFLTPQGQSLVEDVGYVPMYKTLP
Sequences:
>Translated_124_residues MQSQVMKNVRMISPQETEVASMMEGMIKVVAEYRNTNNAIGYTFRYYATQMNADKNIKLLAINGIAPTAENIRNGKYPYI IDAFMVTRENTTSETQKLLEWFLTPQGQSLVEDVGYVPMYKTLP >Mature_124_residues MQSQVMKNVRMISPQETEVASMMEGMIKVVAEYRNTNNAIGYTFRYYATQMNADKNIKLLAINGIAPTAENIRNGKYPYI IDAFMVTRENTTSETQKLLEWFLTPQGQSLVEDVGYVPMYKTLP
Specific function: Unknown
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14171; Mature: 14171
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.3 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.3 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSQVMKNVRMISPQETEVASMMEGMIKVVAEYRNTNNAIGYTFRYYATQMNADKNIKLL CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCEEEE AINGIAPTAENIRNGKYPYIIDAFMVTRENTTSETQKLLEWFLTPQGQSLVEDVGYVPMY EECCCCCCHHHHCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCC KTLP CCCC >Mature Secondary Structure MQSQVMKNVRMISPQETEVASMMEGMIKVVAEYRNTNNAIGYTFRYYATQMNADKNIKLL CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCEEEE AINGIAPTAENIRNGKYPYIIDAFMVTRENTTSETQKLLEWFLTPQGQSLVEDVGYVPMY EECCCCCCHHHHCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCC KTLP CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA