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The map label for this gene is yrfF [H]

Identifier: 82545753

GI number: 82545753

Start: 3368493

End: 3370628

Strand: Direct

Name: yrfF [H]

Synonym: SBO_3385

Alternate gene names: 82545753

Gene position: 3368493-3370628 (Clockwise)

Preceding gene: 228861770

Following gene: 82545754

Centisome position: 74.53

GC content: 52.57

Gene sequence:

>2136_bases
ATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAG
ACGGAGTCAGCTGCCCTGGACCAACGCCTTCGCGGATGCGCAAACGCGTAAACTCACACCTGAAGAACGTAGCGCCGTTG
AAAATTATCTTGAGAGCCTGACGCAGGTATTACAGGTGCCTGGCCCAACGGGAGCTAGCGCGGCACCGATCTCTCTGGCG
CTGAATGCCGAAAGCAACAACGTCATGATGCTGACACACGCTATCACACGTTACGGCATCTCTACCGACGATCCGAATAA
ATGGCGTTACTACCTCGATTCGGTAGAAGTCCACCTGCCCCCCTTCTGGGAACAGTACATCAACGATGAGAATACCGTTG
AACTGATTCATACCGATTCGCTGCCGTTGGTTATTTCACTCAACGGTCATACGCTACAGGAGTACATGCAGGAAACGCGC
GGCTATGCCTTGCAACCTGTTCCGTCCACGCAGGCGTCGATTCGCGGGGAAGAGAGTGAGCAAATCGAGCTACTCAATAT
TCGCAAAGAAACGCATGAAGAATATGCGCTGAGTCGTCCGCGCGGGCTGCGTGAAGCGTTGCTGATCGTCGCCTCCTTCC
TGATGTTCTTTTTCTGCCTGATTACCCCGGATGTATTTGTTCCGTGGCTGGCAGGCGGCGCATTACTGCTGCTGGGCGCA
GGTCTGTGGGGGCTATTCGCGCCCCCGGCAAAATCCTCCCTGCGGGAAATTCATTGTCTGCGCGGTACACCCCGTCGTTG
GGGATTGTTTGGCGAAAACGATCAGGAACAGATCAACAATATTTCACTCGGTATTATCGACCTGGTCTATCCCGCACACT
GGCAGCCATACATTGCTCAGGATCTCGATCAACAAACCGATATTGATATCTATCTCGACTGCCACGTAGTGCGTCAGGGG
CGATATCTTTCGCTGCATGATGAAGTAAAAAACTTTCCGTTACAGCACTGGCTGCGCAGTACGATTATCGCTGCGGGCTC
GCTGCTGGTGCTGTTTATGCTGTTATTCTGGATCCCGCTGGATATGCCGCTGAAATTCACTCTCTCATGGATGAAAGGCG
CGCAGACCATTGAAGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGT
ACGGGAATGTGTAATATTCGCACTTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCA
GATCATCTGGAATGACGCCCGCTCATTACCATTACCAGAATCTGAACTGGTCAACAAAGCGACGGCATTGACTGAAGCAG
TTAATCGCCAGCTGCACCCTAAACCGGAAGATGAATCTCGCGTCAGTGCCTCATTACGTTCAGCGATTCAAAAATCCGGC
ATGGTATTGCTTGATGATTTTGGCGACATTGTACTGAAGACAGCGGATTTATGTTCTGCCAAAGATGACTGTGTGCGACT
GAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATG
GCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACG
CATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGA
TTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGG
CACAAATGCTGATGCATACGCCGTTTAACGCCGAAGGTATCGTCACAAAAATCTTCACTGACGCCAATGGTACGCAGCAT
ATTGGCCTTCATCCGATCCCGGATCGTTCCGGCCTGTGGCGCTATCTCAGCACCACATTGCTGCTACTGACGATGCTGGG
TAGCGCCATTTACAATGGCGTACAGGCCTGGCGTCGTTACCAGCGTCATCGCACTCGCATGATGGAGATTCAGGCCTATT
ATGAAAGCTGCCTGAACCCGCAACTGATCACCCCTTCAGAAAGCCTTATCGAATAA

Upstream 100 bases:

>100_bases
TCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCTGGTGCGACTGACCACGCCTGACAGA
CTAAGTAAGATGGGGAAAGC

Downstream 100 bases:

>100_bases
CACGTTTGCGCGACAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTG
CCTGGCAGGACGTAGATACC

Product: dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 711; Mature: 710

Protein sequence:

>711_residues
MSTIVIFLAALLACSLLAGWLIKVRSRRSQLPWTNAFADAQTRKLTPEERSAVENYLESLTQVLQVPGPTGASAAPISLA
LNAESNNVMMLTHAITRYGISTDDPNKWRYYLDSVEVHLPPFWEQYINDENTVELIHTDSLPLVISLNGHTLQEYMQETR
GYALQPVPSTQASIRGEESEQIELLNIRKETHEEYALSRPRGLREALLIVASFLMFFFCLITPDVFVPWLAGGALLLLGA
GLWGLFAPPAKSSLREIHCLRGTPRRWGLFGENDQEQINNISLGIIDLVYPAHWQPYIAQDLDQQTDIDIYLDCHVVRQG
RYLSLHDEVKNFPLQHWLRSTIIAAGSLLVLFMLLFWIPLDMPLKFTLSWMKGAQTIEATSVKQLADAGVRVGDTLRISG
TGMCNIRTSGTWSAKTNSPFLPFDCSQIIWNDARSLPLPESELVNKATALTEAVNRQLHPKPEDESRVSASLRSAIQKSG
MVLLDDFGDIVLKTADLCSAKDDCVRLKNALVNLGNSKDWDALVKRANAGKLDGVNVLLRPVSAESLDNLVATSTAPFIT
HETARAAQSLNSPAPGGFLIVSDEGSDFVDQPWPSASLYDYPPQEQWNAFQKLAQMLMHTPFNAEGIVTKIFTDANGTQH
IGLHPIPDRSGLWRYLSTTLLLLTMLGSAIYNGVQAWRRYQRHRTRMMEIQAYYESCLNPQLITPSESLIE

Sequences:

>Translated_711_residues
MSTIVIFLAALLACSLLAGWLIKVRSRRSQLPWTNAFADAQTRKLTPEERSAVENYLESLTQVLQVPGPTGASAAPISLA
LNAESNNVMMLTHAITRYGISTDDPNKWRYYLDSVEVHLPPFWEQYINDENTVELIHTDSLPLVISLNGHTLQEYMQETR
GYALQPVPSTQASIRGEESEQIELLNIRKETHEEYALSRPRGLREALLIVASFLMFFFCLITPDVFVPWLAGGALLLLGA
GLWGLFAPPAKSSLREIHCLRGTPRRWGLFGENDQEQINNISLGIIDLVYPAHWQPYIAQDLDQQTDIDIYLDCHVVRQG
RYLSLHDEVKNFPLQHWLRSTIIAAGSLLVLFMLLFWIPLDMPLKFTLSWMKGAQTIEATSVKQLADAGVRVGDTLRISG
TGMCNIRTSGTWSAKTNSPFLPFDCSQIIWNDARSLPLPESELVNKATALTEAVNRQLHPKPEDESRVSASLRSAIQKSG
MVLLDDFGDIVLKTADLCSAKDDCVRLKNALVNLGNSKDWDALVKRANAGKLDGVNVLLRPVSAESLDNLVATSTAPFIT
HETARAAQSLNSPAPGGFLIVSDEGSDFVDQPWPSASLYDYPPQEQWNAFQKLAQMLMHTPFNAEGIVTKIFTDANGTQH
IGLHPIPDRSGLWRYLSTTLLLLTMLGSAIYNGVQAWRRYQRHRTRMMEIQAYYESCLNPQLITPSESLIE
>Mature_710_residues
STIVIFLAALLACSLLAGWLIKVRSRRSQLPWTNAFADAQTRKLTPEERSAVENYLESLTQVLQVPGPTGASAAPISLAL
NAESNNVMMLTHAITRYGISTDDPNKWRYYLDSVEVHLPPFWEQYINDENTVELIHTDSLPLVISLNGHTLQEYMQETRG
YALQPVPSTQASIRGEESEQIELLNIRKETHEEYALSRPRGLREALLIVASFLMFFFCLITPDVFVPWLAGGALLLLGAG
LWGLFAPPAKSSLREIHCLRGTPRRWGLFGENDQEQINNISLGIIDLVYPAHWQPYIAQDLDQQTDIDIYLDCHVVRQGR
YLSLHDEVKNFPLQHWLRSTIIAAGSLLVLFMLLFWIPLDMPLKFTLSWMKGAQTIEATSVKQLADAGVRVGDTLRISGT
GMCNIRTSGTWSAKTNSPFLPFDCSQIIWNDARSLPLPESELVNKATALTEAVNRQLHPKPEDESRVSASLRSAIQKSGM
VLLDDFGDIVLKTADLCSAKDDCVRLKNALVNLGNSKDWDALVKRANAGKLDGVNVLLRPVSAESLDNLVATSTAPFITH
ETARAAQSLNSPAPGGFLIVSDEGSDFVDQPWPSASLYDYPPQEQWNAFQKLAQMLMHTPFNAEGIVTKIFTDANGTQHI
GLHPIPDRSGLWRYLSTTLLLLTMLGSAIYNGVQAWRRYQRHRTRMMEIQAYYESCLNPQLITPSESLIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the igaA family [H]

Homologues:

Organism=Escherichia coli, GI1789801, Length=711, Percent_Identity=99.4374120956399, Blast_Score=1455, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010771
- ProDom:   PD147088 [H]

Pfam domain/function: PF07095 IgaA [H]

EC number: NA

Molecular weight: Translated: 79397; Mature: 79265

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTIVIFLAALLACSLLAGWLIKVRSRRSQLPWTNAFADAQTRKLTPEERSAVENYLESL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHH
TQVLQVPGPTGASAAPISLALNAESNNVMMLTHAITRYGISTDDPNKWRYYLDSVEVHLP
HHHHHCCCCCCCCCCCEEEEEECCCCCEEEEEHHHHHCCCCCCCCCCCEEEEECEEEECC
PFWEQYINDENTVELIHTDSLPLVISLNGHTLQEYMQETRGYALQPVPSTQASIRGEESE
CHHHHHCCCCCEEEEEEECCCCEEEEECCHHHHHHHHHHCCCEECCCCCCHHHCCCCCCC
QIELLNIRKETHEEYALSRPRGLREALLIVASFLMFFFCLITPDVFVPWLAGGALLLLGA
CEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCHHHHHHHH
GLWGLFAPPAKSSLREIHCLRGTPRRWGLFGENDQEQINNISLGIIDLVYPAHWQPYIAQ
HHHHHCCCCHHHHHHHHHHHCCCCHHCCCCCCCCHHHHHCCCEEHHEECCCCCCCCHHHH
DLDQQTDIDIYLDCHVVRQGRYLSLHDEVKNFPLQHWLRSTIIAAGSLLVLFMLLFWIPL
CCCCCCCEEEEEEEEEECCCCEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
DMPLKFTLSWMKGAQTIEATSVKQLADAGVRVGDTLRISGTGMCNIRTSGTWSAKTNSPF
CCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEECCCEECCCCCCCC
LPFDCSQIIWNDARSLPLPESELVNKATALTEAVNRQLHPKPEDESRVSASLRSAIQKSG
CCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCC
MVLLDDFGDIVLKTADLCSAKDDCVRLKNALVNLGNSKDWDALVKRANAGKLDGVNVLLR
CEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCEEEEE
PVSAESLDNLVATSTAPFITHETARAAQSLNSPAPGGFLIVSDEGSDFVDQPWPSASLYD
CCCHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC
YPPQEQWNAFQKLAQMLMHTPFNAEGIVTKIFTDANGTQHIGLHPIPDRSGLWRYLSTTL
CCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEECCCCCCCCCCHHHHHHHHHH
LLLTMLGSAIYNGVQAWRRYQRHRTRMMEIQAYYESCLNPQLITPSESLIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHCC
>Mature Secondary Structure 
STIVIFLAALLACSLLAGWLIKVRSRRSQLPWTNAFADAQTRKLTPEERSAVENYLESL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHH
TQVLQVPGPTGASAAPISLALNAESNNVMMLTHAITRYGISTDDPNKWRYYLDSVEVHLP
HHHHHCCCCCCCCCCCEEEEEECCCCCEEEEEHHHHHCCCCCCCCCCCEEEEECEEEECC
PFWEQYINDENTVELIHTDSLPLVISLNGHTLQEYMQETRGYALQPVPSTQASIRGEESE
CHHHHHCCCCCEEEEEEECCCCEEEEECCHHHHHHHHHHCCCEECCCCCCHHHCCCCCCC
QIELLNIRKETHEEYALSRPRGLREALLIVASFLMFFFCLITPDVFVPWLAGGALLLLGA
CEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCHHHHHHHH
GLWGLFAPPAKSSLREIHCLRGTPRRWGLFGENDQEQINNISLGIIDLVYPAHWQPYIAQ
HHHHHCCCCHHHHHHHHHHHCCCCHHCCCCCCCCHHHHHCCCEEHHEECCCCCCCCHHHH
DLDQQTDIDIYLDCHVVRQGRYLSLHDEVKNFPLQHWLRSTIIAAGSLLVLFMLLFWIPL
CCCCCCCEEEEEEEEEECCCCEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
DMPLKFTLSWMKGAQTIEATSVKQLADAGVRVGDTLRISGTGMCNIRTSGTWSAKTNSPF
CCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEECCCEECCCCCCCC
LPFDCSQIIWNDARSLPLPESELVNKATALTEAVNRQLHPKPEDESRVSASLRSAIQKSG
CCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCC
MVLLDDFGDIVLKTADLCSAKDDCVRLKNALVNLGNSKDWDALVKRANAGKLDGVNVLLR
CEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCEEEEE
PVSAESLDNLVATSTAPFITHETARAAQSLNSPAPGGFLIVSDEGSDFVDQPWPSASLYD
CCCHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC
YPPQEQWNAFQKLAQMLMHTPFNAEGIVTKIFTDANGTQHIGLHPIPDRSGLWRYLSTTL
CCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEECCCCCCCCCCHHHHHHHHHH
LLLTMLGSAIYNGVQAWRRYQRHRTRMMEIQAYYESCLNPQLITPSESLIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]