Definition Shigella boydii Sb227, complete genome.
Accession NC_007613
Length 4,519,823

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The map label for this gene is yhbT [H]

Identifier: 82545603

GI number: 82545603

Start: 3233802

End: 3234326

Strand: Direct

Name: yhbT [H]

Synonym: SBO_3225

Alternate gene names: 82545603

Gene position: 3233802-3234326 (Clockwise)

Preceding gene: 82545599

Following gene: 82545604

Centisome position: 71.55

GC content: 51.43

Gene sequence:

>525_bases
GTGTTGGATAAACTTCGTTCCCGTATTGTGCATTTGGGGCCATCTCTGTTGAGTGTACCGGTAAAACTGACGCCATTTGC
GCTAAAACGCCAGGTTCTTGAGCAGGTCTTAAGCTGGCAATTCCGTCAGGCGCTGGATGATGGCGAGCTGGAGTTTCTTG
AAGGCCGCTGGTTAAGTATTCATGTGCGTGATATTGACCTGCAATGGTTTACCTCGGTGGTGAATGGCAAACTGGTGGTC
AGCCAGAACGCGCAAGCTGATGTGAGTTTTAGTGCCGACGTCAGCGATCTGCTGATGATTGCGGCGCGTAAACAAGATCC
AGATACGCTCTTCTTCCAGCGTCGGCTGGTGATTGAAGGCGATACGGAGCTGGGGCTGCATGTGAAAAACCTGATGGACG
CCATTGAACTGGAGCAAATGCCGAAAGCCTTACGCATGATGCTGCTGCAACTGGCGGATTTTGTTGAGGCGGGAATGAAA
ACCGCGCCTGAAACCAAACAGACATCGGTAGGTGAACCATGCTAA

Upstream 100 bases:

>100_bases
GTGGTAGCAGCAATTTCATATGGAATTGTTGATTTATACCGCTATGTTATTTTTCTGATATGGCAAAATAGGATGATTGT
TGAAACAGGGAGTAAAACTC

Downstream 100 bases:

>100_bases
TTCGAGTAGAAATTCCCATTGATGCGCCGGGTATTGATGCCCTGCTGCGTCGCTCATTCGAAAGTGATGCGGAAGCGAAG
CTGGTTCACGATCTGCGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MLDKLRSRIVHLGPSLLSVPVKLTPFALKRQVLEQVLSWQFRQALDDGELEFLEGRWLSIHVRDIDLQWFTSVVNGKLVV
SQNAQADVSFSADVSDLLMIAARKQDPDTLFFQRRLVIEGDTELGLHVKNLMDAIELEQMPKALRMMLLQLADFVEAGMK
TAPETKQTSVGEPC

Sequences:

>Translated_174_residues
MLDKLRSRIVHLGPSLLSVPVKLTPFALKRQVLEQVLSWQFRQALDDGELEFLEGRWLSIHVRDIDLQWFTSVVNGKLVV
SQNAQADVSFSADVSDLLMIAARKQDPDTLFFQRRLVIEGDTELGLHVKNLMDAIELEQMPKALRMMLLQLADFVEAGMK
TAPETKQTSVGEPC
>Mature_174_residues
MLDKLRSRIVHLGPSLLSVPVKLTPFALKRQVLEQVLSWQFRQALDDGELEFLEGRWLSIHVRDIDLQWFTSVVNGKLVV
SQNAQADVSFSADVSDLLMIAARKQDPDTLFFQRRLVIEGDTELGLHVKNLMDAIELEQMPKALRMMLLQLADFVEAGMK
TAPETKQTSVGEPC

Specific function: Unknown

COG id: COG3154

COG function: function code I; Putative lipid carrier protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789547, Length=174, Percent_Identity=98.8505747126437, Blast_Score=348, Evalue=1e-97,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003033
- InterPro:   IPR016830 [H]

Pfam domain/function: PF02036 SCP2 [H]

EC number: NA

Molecular weight: Translated: 19674; Mature: 19674

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDKLRSRIVHLGPSLLSVPVKLTPFALKRQVLEQVLSWQFRQALDDGELEFLEGRWLSI
CHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEE
HVRDIDLQWFTSVVNGKLVVSQNAQADVSFSADVSDLLMIAARKQDPDTLFFQRRLVIEG
EEEECCHHHHHHHHCCEEEEECCCCCCEEECCCHHHHHHHHHCCCCCCCEEHHEEEEEEC
DTELGLHVKNLMDAIELEQMPKALRMMLLQLADFVEAGMKTAPETKQTSVGEPC
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLDKLRSRIVHLGPSLLSVPVKLTPFALKRQVLEQVLSWQFRQALDDGELEFLEGRWLSI
CHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEE
HVRDIDLQWFTSVVNGKLVVSQNAQADVSFSADVSDLLMIAARKQDPDTLFFQRRLVIEG
EEEECCHHHHHHHHCCEEEEECCCCCCEEECCCHHHHHHHHHCCCCCCCEEHHEEEEEEC
DTELGLHVKNLMDAIELEQMPKALRMMLLQLADFVEAGMKTAPETKQTSVGEPC
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]