Definition Shigella boydii Sb227, complete genome.
Accession NC_007613
Length 4,519,823

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The map label for this gene is yhbX [H]

Identifier: 82545588

GI number: 82545588

Start: 3213360

End: 3215003

Strand: Direct

Name: yhbX [H]

Synonym: SBO_3209

Alternate gene names: 82545588

Gene position: 3213360-3215003 (Clockwise)

Preceding gene: 82545587

Following gene: 161984849

Centisome position: 71.09

GC content: 43.13

Gene sequence:

>1644_bases
GTGAACTTGGATTTCTGGATGACAGTATTCAACAAATTTGCTAGAAGTTTTAAATCTCATTGGTTGTTGTATCTTTGTGT
TATTGTTTTTGGTATTACGAACTTAGTCGCCTCTTCCGGCGCGCATATGGTTCAGCGATTGCTGTTCTTCGTCCTGACCA
TCCTGGTTGTAAAACGTATATCATCCCTTCCGCTTCGCCTGCTTGTTGCCGCACCATTTGTGTTACTGACTGCGGCAGAC
ATGAGTATTAGCCTCTATTCATGGTGTACCTTTGGTACAACTTTCAATGATGGATTTGCGATTAGTGTGCTCCAGAGTGA
TCCGGATGAAGTTGTCAAAATGCTGGGGATGTATATCCCTTATCTATGTGCCTTTGCTTTTTTATCCCTTCTTTTTTGGG
CAGTAATAATAAAATATGATGTTTCCTTGCCGACAAAAAAAGTGACAGGAATATTATTGCTGATTGTCATTTCGGGCAGT
TTATTTTCCGCTTGTCAATTTGCTTATAAAGATGCAAAAAATAAAAAAACGTTCAGTCCATATATACTAGCGTCGCGATT
TGCTACCTATACGCCGTTTTTCAATCTCAACTATTTTGCTTTAGCAGCGAAAGAGCATCAAAGATTACTCTCAATTGCAA
ACACGGTGCCGTATTTTCAATTATCAGTCAGGGATACAGGTATTGATACCTACGTGTTGATTGTGGGGGAGTCTGTACGT
GTCGACAATATGTCTTTGTATGGATATACACGCTCTACGACACCGCAAGTTGAAGCACAAAGAAAACAGATCAAACTGTT
TAATCAAGCAATAAGCAGCGCACCTTACACTGCGCTGTCGGTTCCCCTTTCTTTAACTGCTGATTCTGTTTTGAGTCATG
ACATTCATAATTACCCCGACAACATTATTAATATGGCTAATCAAGCAGGATTTCAGACTTTCTGGCTAAGCTCGCAATCC
GCTTTTCGGCAGAATGGTACTGCAGTTACCAGTATCGCCATGCGCGCCATGGAAACAGTTTATGTCAGAGGATTTGATGA
ATTGTTGTTGCCGCATTTATCGCAAGCATTACAGCAAAATACGCAGCAAAAGAAACTGATTGTTCTTCATTTAAATGGAA
GCCATGAACCGGCTTGTAGCGCCTATCCGCAATCCAGCGCCGTGTTTCAACCGCAGGACGATCAGGATGCCTGCTATGAC
AACTCCATTCATTACACAGATAGTTTGCTAGGTCAGGTTTTTGAATTATTAAAAGATCGCCGCGCCTCGGTCATGTATTT
TGCCGACCACGGCCTGGAACGTGACCCTACGAAGAAGAACGTCTATTTTCATGGAGGCAGGGAGGCTAGCCAGCAGGCAT
ATCATGTCCCGATGTTTATCTGGTATAGCCCCGTTCTTGGGGATGGCGTGGATCGCACAACGGAAAACAACATCTTTTCG
ACAGCTTACAATAATTACCTTATTAATGCGTGGATGGGGGTAACAAAGCCGGAACAGCCGCAAACGCTTGAGGAAGTGAT
TGCACACTATAAAGGAGACTCACGGGTTGTGGATGCAAACCATGATGTTTTCGATTATGTGATGTTCAGAAAGGAGTTTA
CAGAGGATAAGCAAGGTAACCCCCCCCCTGAAGGGCAGGGTTGA

Upstream 100 bases:

>100_bases
AAAAAGAAAAAACTAACAGTGTTTCGGTCTGATATGGATCAGAGTTGAAAAACATGTCTGATATAAAATTGAACATTGTT
GATAATTGTTTATATTGGTT

Downstream 100 bases:

>100_bases
TGTCGAATTACTGGCCTTTGTTTTCCATATTCTCCACCTGCGGCACGCCTGAAGTGGCAGAGGAGGAGAGCAGGCCAGTT
TTGGCATAACCAAAAAGTTT

Product: alkaline phosphatase I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 547; Mature: 547

Protein sequence:

>547_residues
MNLDFWMTVFNKFARSFKSHWLLYLCVIVFGITNLVASSGAHMVQRLLFFVLTILVVKRISSLPLRLLVAAPFVLLTAAD
MSISLYSWCTFGTTFNDGFAISVLQSDPDEVVKMLGMYIPYLCAFAFLSLLFWAVIIKYDVSLPTKKVTGILLLIVISGS
LFSACQFAYKDAKNKKTFSPYILASRFATYTPFFNLNYFALAAKEHQRLLSIANTVPYFQLSVRDTGIDTYVLIVGESVR
VDNMSLYGYTRSTTPQVEAQRKQIKLFNQAISSAPYTALSVPLSLTADSVLSHDIHNYPDNIINMANQAGFQTFWLSSQS
AFRQNGTAVTSIAMRAMETVYVRGFDELLLPHLSQALQQNTQQKKLIVLHLNGSHEPACSAYPQSSAVFQPQDDQDACYD
NSIHYTDSLLGQVFELLKDRRASVMYFADHGLERDPTKKNVYFHGGREASQQAYHVPMFIWYSPVLGDGVDRTTENNIFS
TAYNNYLINAWMGVTKPEQPQTLEEVIAHYKGDSRVVDANHDVFDYVMFRKEFTEDKQGNPPPEGQG

Sequences:

>Translated_547_residues
MNLDFWMTVFNKFARSFKSHWLLYLCVIVFGITNLVASSGAHMVQRLLFFVLTILVVKRISSLPLRLLVAAPFVLLTAAD
MSISLYSWCTFGTTFNDGFAISVLQSDPDEVVKMLGMYIPYLCAFAFLSLLFWAVIIKYDVSLPTKKVTGILLLIVISGS
LFSACQFAYKDAKNKKTFSPYILASRFATYTPFFNLNYFALAAKEHQRLLSIANTVPYFQLSVRDTGIDTYVLIVGESVR
VDNMSLYGYTRSTTPQVEAQRKQIKLFNQAISSAPYTALSVPLSLTADSVLSHDIHNYPDNIINMANQAGFQTFWLSSQS
AFRQNGTAVTSIAMRAMETVYVRGFDELLLPHLSQALQQNTQQKKLIVLHLNGSHEPACSAYPQSSAVFQPQDDQDACYD
NSIHYTDSLLGQVFELLKDRRASVMYFADHGLERDPTKKNVYFHGGREASQQAYHVPMFIWYSPVLGDGVDRTTENNIFS
TAYNNYLINAWMGVTKPEQPQTLEEVIAHYKGDSRVVDANHDVFDYVMFRKEFTEDKQGNPPPEGQG
>Mature_547_residues
MNLDFWMTVFNKFARSFKSHWLLYLCVIVFGITNLVASSGAHMVQRLLFFVLTILVVKRISSLPLRLLVAAPFVLLTAAD
MSISLYSWCTFGTTFNDGFAISVLQSDPDEVVKMLGMYIPYLCAFAFLSLLFWAVIIKYDVSLPTKKVTGILLLIVISGS
LFSACQFAYKDAKNKKTFSPYILASRFATYTPFFNLNYFALAAKEHQRLLSIANTVPYFQLSVRDTGIDTYVLIVGESVR
VDNMSLYGYTRSTTPQVEAQRKQIKLFNQAISSAPYTALSVPLSLTADSVLSHDIHNYPDNIINMANQAGFQTFWLSSQS
AFRQNGTAVTSIAMRAMETVYVRGFDELLLPHLSQALQQNTQQKKLIVLHLNGSHEPACSAYPQSSAVFQPQDDQDACYD
NSIHYTDSLLGQVFELLKDRRASVMYFADHGLERDPTKKNVYFHGGREASQQAYHVPMFIWYSPVLGDGVDRTTENNIFS
TAYNNYLINAWMGVTKPEQPQTLEEVIAHYKGDSRVVDANHDVFDYVMFRKEFTEDKQGNPPPEGQG

Specific function: Involved In Adherence (By Similarity). [C]

COG id: COG2194

COG function: function code R; Predicted membrane-associated, metal-dependent hydrolase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphoethanolamine transferase family [H]

Homologues:

Organism=Escherichia coli, GI87082223, Length=541, Percent_Identity=98.8909426987061, Blast_Score=1112, Evalue=0.0,
Organism=Escherichia coli, GI1787035, Length=268, Percent_Identity=30.9701492537313, Blast_Score=121, Evalue=1e-28,
Organism=Escherichia coli, GI1790392, Length=479, Percent_Identity=24.8434237995825, Blast_Score=119, Evalue=4e-28,
Organism=Escherichia coli, GI87082286, Length=404, Percent_Identity=28.2178217821782, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI87082372, Length=293, Percent_Identity=27.3037542662116, Blast_Score=86, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR000917 [H]

Pfam domain/function: PF00884 Sulfatase [H]

EC number: NA

Molecular weight: Translated: 61709; Mature: 61709

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLDFWMTVFNKFARSFKSHWLLYLCVIVFGITNLVASSGAHMVQRLLFFVLTILVVKRI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
SSLPLRLLVAAPFVLLTAADMSISLYSWCTFGTTFNDGFAISVLQSDPDEVVKMLGMYIP
HHCCHHHHHHHHHHHHHHCCCCEEEEHHEECCCEECCCEEEEEECCCHHHHHHHHHHHHH
YLCAFAFLSLLFWAVIIKYDVSLPTKKVTGILLLIVISGSLFSACQFAYKDAKNKKTFSP
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCH
YILASRFATYTPFFNLNYFALAAKEHQRLLSIANTVPYFQLSVRDTGIDTYVLIVGESVR
HHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEECCEEE
VDNMSLYGYTRSTTPQVEAQRKQIKLFNQAISSAPYTALSVPLSLTADSVLSHDIHNYPD
ECCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCH
NIINMANQAGFQTFWLSSQSAFRQNGTAVTSIAMRAMETVYVRGFDELLLPHLSQALQQN
HHHHHHHHCCCEEEEECCHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
TQQKKLIVLHLNGSHEPACSAYPQSSAVFQPQDDQDACYDNSIHYTDSLLGQVFELLKDR
CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
RASVMYFADHGLERDPTKKNVYFHGGREASQQAYHVPMFIWYSPVLGDGVDRTTENNIFS
CCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCEECEEEEEECCHHCCCCCCCCCCCEEH
TAYNNYLINAWMGVTKPEQPQTLEEVIAHYKGDSRVVDANHDVFDYVMFRKEFTEDKQGN
HHHCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCCC
PPPEGQG
CCCCCCC
>Mature Secondary Structure
MNLDFWMTVFNKFARSFKSHWLLYLCVIVFGITNLVASSGAHMVQRLLFFVLTILVVKRI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
SSLPLRLLVAAPFVLLTAADMSISLYSWCTFGTTFNDGFAISVLQSDPDEVVKMLGMYIP
HHCCHHHHHHHHHHHHHHCCCCEEEEHHEECCCEECCCEEEEEECCCHHHHHHHHHHHHH
YLCAFAFLSLLFWAVIIKYDVSLPTKKVTGILLLIVISGSLFSACQFAYKDAKNKKTFSP
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCH
YILASRFATYTPFFNLNYFALAAKEHQRLLSIANTVPYFQLSVRDTGIDTYVLIVGESVR
HHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEECCEEE
VDNMSLYGYTRSTTPQVEAQRKQIKLFNQAISSAPYTALSVPLSLTADSVLSHDIHNYPD
ECCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCH
NIINMANQAGFQTFWLSSQSAFRQNGTAVTSIAMRAMETVYVRGFDELLLPHLSQALQQN
HHHHHHHHCCCEEEEECCHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
TQQKKLIVLHLNGSHEPACSAYPQSSAVFQPQDDQDACYDNSIHYTDSLLGQVFELLKDR
CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
RASVMYFADHGLERDPTKKNVYFHGGREASQQAYHVPMFIWYSPVLGDGVDRTTENNIFS
CCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCEECEEEEEECCHHCCCCCCCCCCCEEH
TAYNNYLINAWMGVTKPEQPQTLEEVIAHYKGDSRVVDANHDVFDYVMFRKEFTEDKQGN
HHHCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCCC
PPPEGQG
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]