| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is yhcN [H]
Identifier: 82545533
GI number: 82545533
Start: 3156674
End: 3156988
Strand: Reverse
Name: yhcN [H]
Synonym: SBO_3151
Alternate gene names: 82545533
Gene position: 3156988-3156674 (Counterclockwise)
Preceding gene: 82545534
Following gene: 82545529
Centisome position: 69.85
GC content: 47.3
Gene sequence:
>315_bases ATGGGTCGCAAAACAAAGGCCCAGCTAAAAGATTATGTCGAGGTAAAAATCATGAAAATCAAAACCACTGTAGCTGCATT AAGCGTACTTTCTGTTCTCTCTTTCGGTGCATTCGCTGCCGACTCCATTGATGCTGCACAAGCACAAAATCGTGAAGCAA TCGGGACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAA GGCGCAACGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAA
Upstream 100 bases:
>100_bases TTTTGTTATTAAAATTCACATTTTTAACACTTAGTATCAACTGAAACAGTTAGTGTGGTATTAATTAGTTCAATAATTAG TGTATGCTTGATTTTGTGAT
Downstream 100 bases:
>100_bases ACCCTCATCGTCTTGTCCGACGATATTGCCCCCGGTTCGGGGGCTTTTTTTTGCGCTAATGACGAACATTAAAACGCAAA TGCCCTTCCAGCTCTTCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MGRKTKAQLKDYVEVKIMKIKTTVAALSVLSVLSFGAFAADSIDAAQAQNREAIGTVSVSGVASSPMDMREMLNKKAEEK GATAYQITEARSGDTWHATAELYK
Sequences:
>Translated_104_residues MGRKTKAQLKDYVEVKIMKIKTTVAALSVLSVLSFGAFAADSIDAAQAQNREAIGTVSVSGVASSPMDMREMLNKKAEEK GATAYQITEARSGDTWHATAELYK >Mature_103_residues GRKTKAQLKDYVEVKIMKIKTTVAALSVLSVLSFGAFAADSIDAAQAQNREAIGTVSVSGVASSPMDMREMLNKKAEEKG ATAYQITEARSGDTWHATAELYK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BhsA/McbA family [H]
Homologues:
Organism=Escherichia coli, GI87082233, Length=87, Percent_Identity=100, Blast_Score=176, Evalue=2e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010854 [H]
Pfam domain/function: PF07338 DUF1471 [H]
EC number: NA
Molecular weight: Translated: 11186; Mature: 11055
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRKTKAQLKDYVEVKIMKIKTTVAALSVLSVLSFGAFAADSIDAAQAQNREAIGTVSVS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCEEEEEEC GVASSPMDMREMLNKKAEEKGATAYQITEARSGDTWHATAELYK CCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEHHHEECC >Mature Secondary Structure GRKTKAQLKDYVEVKIMKIKTTVAALSVLSVLSFGAFAADSIDAAQAQNREAIGTVSVS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCEEEEEEC GVASSPMDMREMLNKKAEEKGATAYQITEARSGDTWHATAELYK CCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]