| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
Click here to switch to the map view.
The map label for this gene is yggF [H]
Identifier: 82545445
GI number: 82545445
Start: 3057362
End: 3058327
Strand: Direct
Name: yggF [H]
Synonym: SBO_3058
Alternate gene names: 82545445
Gene position: 3057362-3058327 (Clockwise)
Preceding gene: 82545444
Following gene: 82545446
Centisome position: 67.64
GC content: 56.42
Gene sequence:
>966_bases ATGATGTCCCTGGCGTGGCCATTATTTCGCGTTACGGAACAGGCAGCGTTGGCTGCCTGGCCGCAAACCGGATGTGGCGA CAAAAATAAAATTGATGGCCTGGCGGTCACCGCGATGCGCCAGGCATTAAACGACGTCGCTTTTCGTGGACGAGTGGTTA TCGGCGAAGGAGAAATTGACCATGCGCCGATGCTGTGGATTGGCGAAGAGGTGGGCAAAGGCGATGGGCCAGAAGTCGAT ATCGCGGTTGATCCCATTGAAGGCACGCGGATGGTGGCGATGGGGCAGAGCAATGCGCTGGCGGTCATGGCTTTCGCCCC TCGGGATAGCCTGTTACATGCGCCCGATATGTATATGAAAAAGCTGGTTGTTAATCGACTGGCTGCCGGGGTGATTGATC TGTCTTTGCCTCTGGCGGACAACTTGCGTAACGTGGCGCGGGCGTTAGGTAAACCGCTGGACAAGCTGCGCATGGTTACG CTGGATAAACCGCGCCTGAGTGCCGCGATTGAGGAAGCAACACAGCTGGGCGTGAAGGTTTTTGCCCTGCCGGATGGCGA TGTCGCCGCCAGCGTGCTGACCTGCTGGCAGGATAATCCTTACGATGTGATGTACACCATCGGCGGTGCGCCAGAAGGCG TGATTTCTGCCTGTGCCGTTAAAGCATTAGGCGGGGATATGCAGGCCGAGCTGATTGACTTTTGTCAGGCTAAAGGGGAT TACACGGAAAATCGGCAGATTGCAGAGCAGGAGAGCAAGCGTTGCAAGGCAATGGGCGTTGACGTTAACCGTGTGTACTC GCTCGATGAACTGGTGAGGGGGAACGATATCCTCTTTAGCGCTACGGGCGTGACGGGCGGCGAGTTGGTGAACGGTATCC AACAGACGGCGAATGGGGTGCGGACGCAGACATTACTGATCGGCGGCGCGGACCAAACGTGTAATATAATAGACTCCCTG CATTGA
Upstream 100 bases:
>100_bases AGTTGGCGCGGCTGGTTGAGGAAACGCACGGCATCTGGAATGAACAGGCCGAGAAATATCTGCTGGCACAATTTGGCATT GATATCGGGGAGGCCGCGCA
Downstream 100 bases:
>100_bases TGGTGATCTATCGGAAGACCAATGGCGAAGCTGACAGAAGATGATGTGCTTGAGCAACTGGATGCACAGGACAATTTATT TTCATTTATGAAAACTGCGC
Product: fructose-1,6-bisphosphatase II-like protein
Products: NA
Alternate protein names: FBPase 2 class 2; D-fructose-1,6-bisphosphate 1-phosphohydrolase 2 class 2 [H]
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MMSLAWPLFRVTEQAALAAWPQTGCGDKNKIDGLAVTAMRQALNDVAFRGRVVIGEGEIDHAPMLWIGEEVGKGDGPEVD IAVDPIEGTRMVAMGQSNALAVMAFAPRDSLLHAPDMYMKKLVVNRLAAGVIDLSLPLADNLRNVARALGKPLDKLRMVT LDKPRLSAAIEEATQLGVKVFALPDGDVAASVLTCWQDNPYDVMYTIGGAPEGVISACAVKALGGDMQAELIDFCQAKGD YTENRQIAEQESKRCKAMGVDVNRVYSLDELVRGNDILFSATGVTGGELVNGIQQTANGVRTQTLLIGGADQTCNIIDSL H
Sequences:
>Translated_321_residues MMSLAWPLFRVTEQAALAAWPQTGCGDKNKIDGLAVTAMRQALNDVAFRGRVVIGEGEIDHAPMLWIGEEVGKGDGPEVD IAVDPIEGTRMVAMGQSNALAVMAFAPRDSLLHAPDMYMKKLVVNRLAAGVIDLSLPLADNLRNVARALGKPLDKLRMVT LDKPRLSAAIEEATQLGVKVFALPDGDVAASVLTCWQDNPYDVMYTIGGAPEGVISACAVKALGGDMQAELIDFCQAKGD YTENRQIAEQESKRCKAMGVDVNRVYSLDELVRGNDILFSATGVTGGELVNGIQQTANGVRTQTLLIGGADQTCNIIDSL H >Mature_321_residues MMSLAWPLFRVTEQAALAAWPQTGCGDKNKIDGLAVTAMRQALNDVAFRGRVVIGEGEIDHAPMLWIGEEVGKGDGPEVD IAVDPIEGTRMVAMGQSNALAVMAFAPRDSLLHAPDMYMKKLVVNRLAAGVIDLSLPLADNLRNVARALGKPLDKLRMVT LDKPRLSAAIEEATQLGVKVFALPDGDVAASVLTCWQDNPYDVMYTIGGAPEGVISACAVKALGGDMQAELIDFCQAKGD YTENRQIAEQESKRCKAMGVDVNRVYSLDELVRGNDILFSATGVTGGELVNGIQQTANGVRTQTLLIGGADQTCNIIDSL H
Specific function: Catalyzes the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate. Also displays a low activity toward glucose 1,6-bisphosphate, and no activity against ribulose 1,5- bisphosphate, fructose 2,6-bisphosphate, or fructose 1-phosphate [H]
COG id: COG1494
COG function: function code G; Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FBPase class 2 family [H]
Homologues:
Organism=Escherichia coli, GI1789298, Length=321, Percent_Identity=98.7538940809969, Blast_Score=647, Evalue=0.0, Organism=Escherichia coli, GI1790360, Length=319, Percent_Identity=58.307210031348, Blast_Score=360, Evalue=1e-101,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004464 [H]
Pfam domain/function: PF03320 FBPase_glpX [H]
EC number: =3.1.3.11 [H]
Molecular weight: Translated: 34281; Mature: 34281
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSLAWPLFRVTEQAALAAWPQTGCGDKNKIDGLAVTAMRQALNDVAFRGRVVIGEGEID CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCC HAPMLWIGEEVGKGDGPEVDIAVDPIEGTRMVAMGQSNALAVMAFAPRDSLLHAPDMYMK CCCEEEECHHHCCCCCCEEEEEECCCCCCEEEEECCCCCEEEEEECCCCCCCCCCHHHHH KLVVNRLAAGVIDLSLPLADNLRNVARALGKPLDKLRMVTLDKPRLSAAIEEATQLGVKV HHHHHHHHHHHHEEECCCHHHHHHHHHHHCCCHHHHEEEEECCHHHHHHHHHHHHCCEEE FALPDGDVAASVLTCWQDNPYDVMYTIGGAPEGVISACAVKALGGDMQAELIDFCQAKGD EEECCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCC YTENRQIAEQESKRCKAMGVDVNRVYSLDELVRGNDILFSATGVTGGELVNGIQQTANGV CCCCHHHHHHHHHHHHHCCCCHHHHHCHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCC RTQTLLIGGADQTCNIIDSLH EEEEEEEECCCCHHHHHHCCC >Mature Secondary Structure MMSLAWPLFRVTEQAALAAWPQTGCGDKNKIDGLAVTAMRQALNDVAFRGRVVIGEGEID CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCC HAPMLWIGEEVGKGDGPEVDIAVDPIEGTRMVAMGQSNALAVMAFAPRDSLLHAPDMYMK CCCEEEECHHHCCCCCCEEEEEECCCCCCEEEEECCCCCEEEEEECCCCCCCCCCHHHHH KLVVNRLAAGVIDLSLPLADNLRNVARALGKPLDKLRMVTLDKPRLSAAIEEATQLGVKV HHHHHHHHHHHHEEECCCHHHHHHHHHHHCCCHHHHEEEEECCHHHHHHHHHHHHCCEEE FALPDGDVAASVLTCWQDNPYDVMYTIGGAPEGVISACAVKALGGDMQAELIDFCQAKGD EEECCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCC YTENRQIAEQESKRCKAMGVDVNRVYSLDELVRGNDILFSATGVTGGELVNGIQQTANGV CCCCHHHHHHHHHHHHHCCCCHHHHHCHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCC RTQTLLIGGADQTCNIIDSLH EEEEEEEECCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503; 2546007 [H]