| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is yqjG [H]
Identifier: 82545363
GI number: 82545363
Start: 2973244
End: 2974119
Strand: Direct
Name: yqjG [H]
Synonym: SBO_2969
Alternate gene names: 82545363
Gene position: 2973244-2974119 (Clockwise)
Preceding gene: 82545362
Following gene: 82545364
Centisome position: 65.78
GC content: 51.14
Gene sequence:
>876_bases ATGACACCTGGCCCCACTGGCACAGGCGGTTTTATCGCAGAGAAAGATCGTTATCATCTCTATGTTTCACTCGCCTGCCC GTGGGCGCACCGCACGCTGATCATGCGCAAACTCAAAGGACTGGAACCGTTTATTTCCGTTTCCGTAGTGAACCCGCTGA TGCTGGAAAACGGCTGGACCTTTGATGACAGTTTTCCGGGAGCAACCGGAGATACGCTCTATCAACATGAATTTCTGTAT CAGCTTTATCTCCACGCCGATCCACACTACAGCGGACGAGTTACTGTTCCCGTGCTGTGGGACAAAAAGAACCACACCAT TGTCAGCAACGAATCAGCAGAAATCATCCGCATGTTCAATACCGCGTTTGATGCGCTGGGCGCAAAAGCGGGTGATTACT ACCCACCAGCCCTGCAAACGAAAATTGACGAACTTAACGGCTGGATTTATGACACCGTTAACAACGGCGTGTATAAAGCT GGTTTTGCCACCAGCCAGCAAGCCTACGACGAGGCGGTGGCGAAAGTGTTTGAATCGCTGGCGCGACTGGAGCAGATTTT AGGCCAGCATCGTTACCTGACCGGCAACCAGCTAACCGAAGCCGATATTCGCCTGTGGACTACGCTGGTGCGTTTTGATC CAGTGTATGTGACCCACTTCAAGTGTGATAAGCACCGCATCAGCGATTACCTGAATCTGTATGGCTTCCTGCGCGATATC TACCAGATGCCGGGGATCGCCGAAACTGTCAATTTCGATCACATCCGTAATCATTACTTCCGCAGCCATAAGACCATCAA CCCTACGGGGATTATTTCAATTGGTCCGTGGCAGGATCTCGATGAACCACATGGACGAGATGTTCGCTTCGGTTAA
Upstream 100 bases:
>100_bases TAAGCACGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGGCA ACTGATTGACGGCGTCTGGC
Downstream 100 bases:
>100_bases AAAAAGGCACCTTACGAGGTGCCTCTGATAATTAGCTAAGTGCATGTTGTTCATGTCGGATGCGGCGTGAACGCCTTATC AAACCTACAAAACGTTTATA
Product: transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MTPGPTGTGGFIAEKDRYHLYVSLACPWAHRTLIMRKLKGLEPFISVSVVNPLMLENGWTFDDSFPGATGDTLYQHEFLY QLYLHADPHYSGRVTVPVLWDKKNHTIVSNESAEIIRMFNTAFDALGAKAGDYYPPALQTKIDELNGWIYDTVNNGVYKA GFATSQQAYDEAVAKVFESLARLEQILGQHRYLTGNQLTEADIRLWTTLVRFDPVYVTHFKCDKHRISDYLNLYGFLRDI YQMPGIAETVNFDHIRNHYFRSHKTINPTGIISIGPWQDLDEPHGRDVRFG
Sequences:
>Translated_291_residues MTPGPTGTGGFIAEKDRYHLYVSLACPWAHRTLIMRKLKGLEPFISVSVVNPLMLENGWTFDDSFPGATGDTLYQHEFLY QLYLHADPHYSGRVTVPVLWDKKNHTIVSNESAEIIRMFNTAFDALGAKAGDYYPPALQTKIDELNGWIYDTVNNGVYKA GFATSQQAYDEAVAKVFESLARLEQILGQHRYLTGNQLTEADIRLWTTLVRFDPVYVTHFKCDKHRISDYLNLYGFLRDI YQMPGIAETVNFDHIRNHYFRSHKTINPTGIISIGPWQDLDEPHGRDVRFG >Mature_290_residues TPGPTGTGGFIAEKDRYHLYVSLACPWAHRTLIMRKLKGLEPFISVSVVNPLMLENGWTFDDSFPGATGDTLYQHEFLYQ LYLHADPHYSGRVTVPVLWDKKNHTIVSNESAEIIRMFNTAFDALGAKAGDYYPPALQTKIDELNGWIYDTVNNGVYKAG FATSQQAYDEAVAKVFESLARLEQILGQHRYLTGNQLTEADIRLWTTLVRFDPVYVTHFKCDKHRISDYLNLYGFLRDIY QMPGIAETVNFDHIRNHYFRSHKTINPTGIISIGPWQDLDEPHGRDVRFG
Specific function: Unknown
COG id: COG0435
COG function: function code O; Predicted glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1789489, Length=289, Percent_Identity=99.3079584775086, Blast_Score=602, Evalue=1e-173, Organism=Saccharomyces cerevisiae, GI6322929, Length=333, Percent_Identity=41.7417417417417, Blast_Score=229, Evalue=3e-61, Organism=Saccharomyces cerevisiae, GI6323906, Length=334, Percent_Identity=36.8263473053892, Blast_Score=197, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6321593, Length=339, Percent_Identity=31.858407079646, Blast_Score=151, Evalue=1e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR016639 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C [H]
EC number: NA
Molecular weight: Translated: 33283; Mature: 33152
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPGPTGTGGFIAEKDRYHLYVSLACPWAHRTLIMRKLKGLEPFISVSVVNPLMLENGWT CCCCCCCCCCCEEECCCEEEEEEEECCHHHHHHHHHHHCCCCCEEEHHHHCHHHHCCCCC FDDSFPGATGDTLYQHEFLYQLYLHADPHYSGRVTVPVLWDKKNHTIVSNESAEIIRMFN CCCCCCCCCCCHHHHHHHHHHEEEECCCCCCCEEEEEEEECCCCCEEEECCCHHHHHHHH TAFDALGAKAGDYYPPALQTKIDELNGWIYDTVNNGVYKAGFATSQQAYDEAVAKVFESL HHHHHHCCCCCCCCCCHHHHHHHHHCCEEEECCCCCEEECCCCCCHHHHHHHHHHHHHHH ARLEQILGQHRYLTGNQLTEADIRLWTTLVRFDPVYVTHFKCDKHRISDYLNLYGFLRDI HHHHHHHCCCCEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHH YQMPGIAETVNFDHIRNHYFRSHKTINPTGIISIGPWQDLDEPHGRDVRFG HHCCCCHHHCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure TPGPTGTGGFIAEKDRYHLYVSLACPWAHRTLIMRKLKGLEPFISVSVVNPLMLENGWT CCCCCCCCCCEEECCCEEEEEEEECCHHHHHHHHHHHCCCCCEEEHHHHCHHHHCCCCC FDDSFPGATGDTLYQHEFLYQLYLHADPHYSGRVTVPVLWDKKNHTIVSNESAEIIRMFN CCCCCCCCCCCHHHHHHHHHHEEEECCCCCCCEEEEEEEECCCCCEEEECCCHHHHHHHH TAFDALGAKAGDYYPPALQTKIDELNGWIYDTVNNGVYKAGFATSQQAYDEAVAKVFESL HHHHHHCCCCCCCCCCHHHHHHHHHCCEEEECCCCCEEECCCCCCHHHHHHHHHHHHHHH ARLEQILGQHRYLTGNQLTEADIRLWTTLVRFDPVYVTHFKCDKHRISDYLNLYGFLRDI HHHHHHHCCCCEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHH YQMPGIAETVNFDHIRNHYFRSHKTINPTGIISIGPWQDLDEPHGRDVRFG HHCCCCHHHCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]