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The map label for this gene is ygjR [H]

Identifier: 82545343

GI number: 82545343

Start: 2954512

End: 2955516

Strand: Direct

Name: ygjR [H]

Synonym: SBO_2948

Alternate gene names: 82545343

Gene position: 2954512-2955516 (Clockwise)

Preceding gene: 82545342

Following gene: 82545344

Centisome position: 65.37

GC content: 52.34

Gene sequence:

>1005_bases
ATGGAGTATCCACGCGTTATGATACGTTTCGCTGTGATTGGTACGAACTGGATCACTCGCCAGTTCGTCGAGGCCGCCCA
TGAGAGCGGTAAATACAAGTTAACCGCCGTATATTCCCGCAGCCTTGAACAGGCCCAGCACTTCGCCAATGATTTTTCTG
TCGAGCATCTGTTTACCTCGCTGGAAGCGATGGCGGAAAGCGATGCCATTGACGCGGTGTATATTGCCAGCCCGAATGCC
CTGCACTTTTCCCAGACACAACTTTTCCTTAGCCATAAAATTCATGTGATTTGCGAGAAACCACTGGCGTCGAATCTGGC
GGAAGTGGATGCCGCCATTGCCTGTGCGCGGGAAAATCAGGTGGTGCTGTTTGAGGCATTTAAAACCGCCAGCCTGCCGA
ACTTTCATTTGCTGCGCCAGGCGCTGCCGAAAGTCGGCAAATTGCGTAAAGTCTTTTTCAACTATTGCCAGTATTCCTCG
CGGTATCAACGTTACCTGGATGGTGAGAATCCCAACACCTTTAATCCGGCATTCTCTAACGGTTCAATTATGGATATCGG
CTTTTACTGCCTGGCGTCGGCGGTGGCATTATTCGGTGAACCGAAAAGCGTGCAGGCAACCGCCAGTTTGTTGGCAAGCG
GCGTAGATGCCCACGGCGTGGTGGTGATGGATTACGGTGATTTCAGCGTTACGTTGCTGCACTCAAAGGTCAGTGATTCT
GTCCTGGAAAGCGAGATTCAGGGCGAAGCGGGATCGCTGGTGATTGAAAAACTGTCTGAATGCCAGAAAGTGTGCTTCGT
GCCGCGTGGCAGCCAGATGCAGGATCTCACCCAGCCGCAGCATATTAATACCATGCTCTACGAAGCAGAGCTGTTTGCTA
CCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACTGAGATCCGC
CGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAA

Upstream 100 bases:

>100_bases
TGGGCCGTTTAGTGAGCATGGCTGTCCGGCAAAAGAATAATGCGTATCTGCGCACGTCGAAGATGAAAAAGGCGTGCTAC
ATTGACGACAGAATCCCTTT

Downstream 100 bases:

>100_bases
TTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCGGAATGGTCTGTCATACTTTGTTACCTGCAA
AGGGGAGTAACTTCATTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MEYPRVMIRFAVIGTNWITRQFVEAAHESGKYKLTAVYSRSLEQAQHFANDFSVEHLFTSLEAMAESDAIDAVYIASPNA
LHFSQTQLFLSHKIHVICEKPLASNLAEVDAAIACARENQVVLFEAFKTASLPNFHLLRQALPKVGKLRKVFFNYCQYSS
RYQRYLDGENPNTFNPAFSNGSIMDIGFYCLASAVALFGEPKSVQATASLLASGVDAHGVVVMDYGDFSVTLLHSKVSDS
VLESEIQGEAGSLVIEKLSECQKVCFVPRGSQMQDLTQPQHINTMLYEAELFATLVDEHLVDHPGLAVSRITAKLLTEIR
RQTGVIFPADSVKL

Sequences:

>Translated_334_residues
MEYPRVMIRFAVIGTNWITRQFVEAAHESGKYKLTAVYSRSLEQAQHFANDFSVEHLFTSLEAMAESDAIDAVYIASPNA
LHFSQTQLFLSHKIHVICEKPLASNLAEVDAAIACARENQVVLFEAFKTASLPNFHLLRQALPKVGKLRKVFFNYCQYSS
RYQRYLDGENPNTFNPAFSNGSIMDIGFYCLASAVALFGEPKSVQATASLLASGVDAHGVVVMDYGDFSVTLLHSKVSDS
VLESEIQGEAGSLVIEKLSECQKVCFVPRGSQMQDLTQPQHINTMLYEAELFATLVDEHLVDHPGLAVSRITAKLLTEIR
RQTGVIFPADSVKL
>Mature_334_residues
MEYPRVMIRFAVIGTNWITRQFVEAAHESGKYKLTAVYSRSLEQAQHFANDFSVEHLFTSLEAMAESDAIDAVYIASPNA
LHFSQTQLFLSHKIHVICEKPLASNLAEVDAAIACARENQVVLFEAFKTASLPNFHLLRQALPKVGKLRKVFFNYCQYSS
RYQRYLDGENPNTFNPAFSNGSIMDIGFYCLASAVALFGEPKSVQATASLLASGVDAHGVVVMDYGDFSVTLLHSKVSDS
VLESEIQGEAGSLVIEKLSECQKVCFVPRGSQMQDLTQPQHINTMLYEAELFATLVDEHLVDHPGLAVSRITAKLLTEIR
RQTGVIFPADSVKL

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI7657212, Length=346, Percent_Identity=24.8554913294798, Blast_Score=95, Evalue=1e-19,
Organism=Escherichia coli, GI145693182, Length=328, Percent_Identity=98.1707317073171, Blast_Score=666, Evalue=0.0,
Organism=Drosophila melanogaster, GI24581117, Length=345, Percent_Identity=26.0869565217391, Blast_Score=100, Evalue=9e-22,
Organism=Drosophila melanogaster, GI24581115, Length=339, Percent_Identity=23.8938053097345, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24584727, Length=213, Percent_Identity=26.2910798122066, Blast_Score=71, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 37034; Mature: 37034

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYPRVMIRFAVIGTNWITRQFVEAAHESGKYKLTAVYSRSLEQAQHFANDFSVEHLFTS
CCCCCEEEEEEECCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHCHHHHHHHH
LEAMAESDAIDAVYIASPNALHFSQTQLFLSHKIHVICEKPLASNLAEVDAAIACARENQ
HHHHHCCCCCCEEEEECCCCEEHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHCCCCCC
VVLFEAFKTASLPNFHLLRQALPKVGKLRKVFFNYCQYSSRYQRYLDGENPNTFNPAFSN
EEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
GSIMDIGFYCLASAVALFGEPKSVQATASLLASGVDAHGVVVMDYGDFSVTLLHSKVSDS
CCEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECCCEEEEEEHHHHHHH
VLESEIQGEAGSLVIEKLSECQKVCFVPRGSQMQDLTQPQHINTMLYEAELFATLVDEHL
HHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHH
VDHPGLAVSRITAKLLTEIRRQTGVIFPADSVKL
HCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCC
>Mature Secondary Structure
MEYPRVMIRFAVIGTNWITRQFVEAAHESGKYKLTAVYSRSLEQAQHFANDFSVEHLFTS
CCCCCEEEEEEECCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHCHHHHHHHH
LEAMAESDAIDAVYIASPNALHFSQTQLFLSHKIHVICEKPLASNLAEVDAAIACARENQ
HHHHHCCCCCCEEEEECCCCEEHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHCCCCCC
VVLFEAFKTASLPNFHLLRQALPKVGKLRKVFFNYCQYSSRYQRYLDGENPNTFNPAFSN
EEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
GSIMDIGFYCLASAVALFGEPKSVQATASLLASGVDAHGVVVMDYGDFSVTLLHSKVSDS
CCEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECCCEEEEEEHHHHHHH
VLESEIQGEAGSLVIEKLSECQKVCFVPRGSQMQDLTQPQHINTMLYEAELFATLVDEHL
HHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHH
VDHPGLAVSRITAKLLTEIRRQTGVIFPADSVKL
HCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]