| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
Click here to switch to the map view.
The map label for this gene is recX [H]
Identifier: 82545226
GI number: 82545226
Start: 2829380
End: 2829880
Strand: Direct
Name: recX [H]
Synonym: SBO_2820
Alternate gene names: 82545226
Gene position: 2829380-2829880 (Clockwise)
Preceding gene: 82545225
Following gene: 82545227
Centisome position: 62.6
GC content: 50.9
Gene sequence:
>501_bases ATGACAGAATCAACGTCCCGTCGCCCGGCATATGCTCGCCTGTTGGATCGTGCGGTACGCATTCTGGCGGTGCGCGATCA CAGTGAGCAAGAACTGCGACGTAAACTCGCGGCACCGATTATGGGCAAAAATGGCCCAGAAGAGATTGATGCTACGGCAG AAGATTACGAGCGCGTTATTGCATGGTGCCATGAACATGGCTATCTCGATGACAGCCGATTTGTTGCGCGCTTTATCGCC AGCCGTAGCCGCAAAGGTTATGGACCTGCACGTATTCGTCAGGAACTGAATCAGAAAGGTATTTCCCGCGAAGCGACAGA AAAAGCGATGCGTGAATGTGACATCGACTGGTGCGCACTGGCGCGCGATCAGGCGACGCGAAAATATGATGAACCTTTGC CAACTGTCTTTTCAGAAAAAGTTAAGATCCAGCGTTTTCTGCTCTATCGTGGCTATCTGATGGAAGATATCCAGGATATT TGGCGAAATTTTGCCGACTGA
Upstream 100 bases:
>100_bases GGGAACATTCTGCACACTCATTGACTATTAAATCTGTTTATCAGCAAAACCTGGGTCGCATCTGCGGCCCTTTTGCTTTT TTAAGTTGTAAGGATATGCC
Downstream 100 bases:
>100_bases ACGCATACGGTATTTTACTTCCCAGTCAAGAAAACTTATCTTATTCCCACTTTTCAGTTACCAGCCCGGCGGTTAAGACA CGCTGGAGCTGGTGGCGATA
Product: recombination regulator RecX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MTESTSRRPAYARLLDRAVRILAVRDHSEQELRRKLAAPIMGKNGPEEIDATAEDYERVIAWCHEHGYLDDSRFVARFIA SRSRKGYGPARIRQELNQKGISREATEKAMRECDIDWCALARDQATRKYDEPLPTVFSEKVKIQRFLLYRGYLMEDIQDI WRNFAD
Sequences:
>Translated_166_residues MTESTSRRPAYARLLDRAVRILAVRDHSEQELRRKLAAPIMGKNGPEEIDATAEDYERVIAWCHEHGYLDDSRFVARFIA SRSRKGYGPARIRQELNQKGISREATEKAMRECDIDWCALARDQATRKYDEPLPTVFSEKVKIQRFLLYRGYLMEDIQDI WRNFAD >Mature_165_residues TESTSRRPAYARLLDRAVRILAVRDHSEQELRRKLAAPIMGKNGPEEIDATAEDYERVIAWCHEHGYLDDSRFVARFIAS RSRKGYGPARIRQELNQKGISREATEKAMRECDIDWCALARDQATRKYDEPLPTVFSEKVKIQRFLLYRGYLMEDIQDIW RNFAD
Specific function: Modulates recA activity [H]
COG id: COG2137
COG function: function code R; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the recX family [H]
Homologues:
Organism=Escherichia coli, GI1789050, Length=166, Percent_Identity=98.7951807228916, Blast_Score=338, Evalue=8e-95,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003783 [H]
Pfam domain/function: PF02631 RecX [H]
EC number: NA
Molecular weight: Translated: 19468; Mature: 19337
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTESTSRRPAYARLLDRAVRILAVRDHSEQELRRKLAAPIMGKNGPEEIDATAEDYERVI CCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHH AWCHEHGYLDDSRFVARFIASRSRKGYGPARIRQELNQKGISREATEKAMRECDIDWCAL HHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHH ARDQATRKYDEPLPTVFSEKVKIQRFLLYRGYLMEDIQDIWRNFAD HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TESTSRRPAYARLLDRAVRILAVRDHSEQELRRKLAAPIMGKNGPEEIDATAEDYERVI CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHH AWCHEHGYLDDSRFVARFIASRSRKGYGPARIRQELNQKGISREATEKAMRECDIDWCAL HHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHH ARDQATRKYDEPLPTVFSEKVKIQRFLLYRGYLMEDIQDIWRNFAD HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA