| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is surE [H]
Identifier: 82545183
GI number: 82545183
Start: 2783005
End: 2783766
Strand: Direct
Name: surE [H]
Synonym: SBO_2776
Alternate gene names: 82545183
Gene position: 2783005-2783766 (Clockwise)
Preceding gene: 82545182
Following gene: 82545184
Centisome position: 61.57
GC content: 55.12
Gene sequence:
>762_bases ATGCGCATATTGCTGAGTAATGATGACGGGGTACATGCACCCGGTATACAAACGCTGGCGAAAGCCTTGCGTGAGTTTGC TGACGTTCAGGTGGTCGCCCCCGATCGTAACCGCAGCGGCGCTTCAAATTCTCTGACACTGGAATCCTCCCTGCGCACGT TTACCTTTGAAAATGGTGATATTGCTGTGCAAATGGGAACCCCGACCGATTGCGTCTATCTTGGCGTGAATGCTCTGATG CGTCCGCGCCCGGACATTGTTGTGTCCGGCATTAACGCCGGGCCGAATCTGGGGGATGACGTTATTTATTCCGGTACGGT AGCCGCCGCGATGGAAGGCCGTCATTTAGGTTTTCCGGCGCTGGCCGTCTCGCTTGACGGGCATAAACATTACGACACTG CCGCGGCGGTAACCTGTTCAATTTTGCGCGCACTGTGTAAAGAGCCGCTGCGCACCGGACGTATTCTTAATATTAACGTT CCGGATTTACCCTTGGATCAAATCAAAGGTATTCGCGTGACGCGCTGCGGTACACGACATCCGGCAGATCAGGTGATCCC GCAGCAAGATCCGCGCGGCAATACGCTGTACTGGATTGGCCCGCCGGGCGGTAAATGTGATGCCGGTCCGGGGACCGATT TTGCTGCGGTAGATGAGGGCTATGTCTCCATCACGCCGCTGCATGTGGATTTAACTGCGCATAGCGCGCAAGATGTGGTT TCAGACTGGTTAAACAGCGTGGGAGTTGGCACGCAATGGTAA
Upstream 100 bases:
>100_bases AATTGGTGGGATGACGTCACCGTAGAGATCCGTTTCTGGCTTCCGGCGGGTAGTTTTGCAACCAGCGTTGTCAGGGAACT TATCAACACAACAGGTGATT
Downstream 100 bases:
>100_bases GCAGACGCGTACAAGCACTTCTGGATCAATTACGTGCGCAAGGTATTCAGGATGAGCAGGTGCTGAATGCACTTGCTGCC GTGCCGCGTGAAAAATTCGT
Product: stationary phase survival protein SurE
Products: NA
Alternate protein names: 5'/3'-nucleotidase; Nucleoside monophosphate phosphohydrolase; Exopolyphosphatase [H]
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALM RPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINV PDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVV SDWLNSVGVGTQW
Sequences:
>Translated_253_residues MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALM RPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINV PDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVV SDWLNSVGVGTQW >Mature_253_residues MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALM RPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINV PDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVV SDWLNSVGVGTQW
Specific function: Nucleotidase with a broad substrate specificity as it can dephosphorylate various ribo- and deoxyribonucleoside 5'- monophosphates and ribonucleoside 3'-monophosphates with highest affinity to 3'-AMP. Also hydrolyzes polyphosphate (exopolyphosphatase acti
COG id: COG0496
COG function: function code R; Predicted acid phosphatase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surE nucleotidase family [H]
Homologues:
Organism=Escherichia coli, GI1789101, Length=253, Percent_Identity=100, Blast_Score=517, Evalue=1e-148,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002828 [H]
Pfam domain/function: PF01975 SurE [H]
EC number: =3.1.3.5; =3.1.3.6; =3.6.1.11 [H]
Molecular weight: Translated: 26901; Mature: 26901
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGD CEEEEECCCCCCCCCHHHHHHHHHHHHCEEEECCCCCCCCCCCEEEEECCCEEEEEECCC IAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPA EEEEECCCCCEEEECHHHHCCCCCCEEEECCCCCCCCCCCEEECCEEEEEECCCCCCCCE LAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVPDLPLDQIKGIRVTRCGTRH EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHCCEEEEECCCCC PADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVV CHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCEEEEEEEEEEEECCCHHHHH SDWLNSVGVGTQW HHHHHHCCCCCCC >Mature Secondary Structure MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGD CEEEEECCCCCCCCCHHHHHHHHHHHHCEEEECCCCCCCCCCCEEEEECCCEEEEEECCC IAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPA EEEEECCCCCEEEECHHHHCCCCCCEEEECCCCCCCCCCCEEECCEEEEEECCCCCCCCE LAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVPDLPLDQIKGIRVTRCGTRH EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHCCEEEEECCCCC PADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVV CHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCEEEEEEEEEEEECCCHHHHH SDWLNSVGVGTQW HHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA