| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is aas [H]
Identifier: 82545138
GI number: 82545138
Start: 2739104
End: 2741263
Strand: Reverse
Name: aas [H]
Synonym: SBO_2728
Alternate gene names: 82545138
Gene position: 2741263-2739104 (Counterclockwise)
Preceding gene: 82545140
Following gene: 82545137
Centisome position: 60.65
GC content: 52.31
Gene sequence:
>2160_bases ATGCTTTTTAGCTTTTTTCGAAATTTGTGCCGTGTTTTGTATCGCGTTCGCGTTACGGGTGACACCCAGGCACTGAAGGG CGAGCGCGTTCTAATTACGCCTAATCACGTCTCTTTTATTGATGGCATTTTGCTTGGACTGTTTTTACCTGTGCGTCCAG TGTTTGCCGTTTACACCTCAATAAGCCAACAGTGGTATATGCGTTGGCTGAAATCATTTATCGACTTTGTTCCTCTCGAC CCGACGCAACCTATGGCTATTAAACATCTGGTACGTCTGGTGGAACAGGGCCGACCAGTGGTGATTTTCCCTGAAGGACG CATCACCACTACAGGCTCGCTGATGAAAATCTACGATGGCGCGGGTTTTGTCGCGGCGAAGTCTGGTGCAACGGTTATTC CTGTGCGTATTGAAGGGGCGGAACTTACGCACTTCAGCCGCCTGAAAGGTCTGGTTAAACGTCGCTTGTTCCCGCAAATT ACTCTGCATATTTTGCCTCCAACGCAGGTGGCGATGCCGGATGCGTCGCGTGCCCGTGACCGTCGCAAAATCGCTGGCGA AATGCTGCATCAAATAATGATGGAAGCGCGTATGGCGGTGCGCCCGCGTGAAACTCTGTACGAATCTTTACTGAGTGCAA TGTACCGCTTCGGAGCCGGGAAGAAATGTGTCGAAGACGTCAACTTTACCCCAGACTCCTATCGCAAATTGCTTACGAAA ACGCTGTTTGTTGGACGCATCCTTGAAAAATACAGTGTTGAAGGCGAACGCATCGGCTTAATGCTGCCCAATGCAGGCAT CAGTGCGGCAGTGATTTTTGGGGCCATCGCGCGTCGCCGCATTCCCGCAATGATGAACTACACTGCTGGGGTAAAAGGGC TGACCAGTGCTATTACGGCGGCTGAAATCAAAACCATCTTCACTTCCCGCCAGTTTCTCGATAAAGGCAAACTCTGGCAT CTGCCGGAGCAACTTACTCAGGTGCGCTGGGTCTATCTGGAAGATTTAAAAGCAGATGTCACCACTGCCGACAAAGTATG GATCTTCGCTCATTTGCTGATGCCGCGCCTGGCGCAGGTAAAACAGCAGCCGGAAGAAGAGGCGCTGATCCTCTTTACCT CCGGTTCTGAAGGCCATCCAAAAGGCGTCGTCCATAGCCATAAAAGCATTCTGGCGAACGTCGAGCAGATTAAAACGATT GCCGACTTCACCACCAACGATCGCTTTATGTCGGCATTACCGCTGTTTCACTCCTTTGGGCTGACGGTAGGCCTGTTTAC GCCACTGCTTACAGGTGCAGAAGTGTTCCTTTATCCAAGCCCGCTGCATTACCGCATTGTGCCGGAGTTGGTGTATGACC GCAGTTGCACCGTGTTGTTCGGTACCTCGACTTTCCTCGGTCACTACGCGCGTTTCGCCAACCCGTATGACTTCTATCGT CTACGCTATGTGGTGGCAGGCGCAGAAAAACTACAAGAAAGTACCAAACAGCTTTGGCTGGATAAATTTGGCCTGCGCAT CCTTGAAGGCTATGGTGTAACCGAGTGCGCGCCTGTCGTTTCTATCAACGTACCGATGGCGGCGAAACCCGGTACGGTAG GGCGTATTCTACCAGGAATGGATGCGCGCCTGTTGTCGGTTCCTGGTATCGAAGAGGGCGGACGCCTGCAACTGAAAGGG CCGAACATAATGAACGGCTATCTGCGGGTGGAGAAGCCAGGTGTACTGGAAGTGCCCACCGCCGAGAATGTTCGCGGCGA AATGGAGCGCGGCTGGTATGACACTGGCGATATTGTGCGTTTTGACGAGCAGGGCTTTGTGCAGATTCAGGGCCGCGCAA AACGCTTTGCCAAAATTGCAGGCGAAATGGTGTCGCTGGAAATGGTGGAACAACTGGCACTTGGTGTTTCGCCAGATAAA GTCCATGCCACTGCGATTAAGAGCGATGCCAGCAAAGGCGAGGCACTGGTGCTTTTCACCACAGATAACGAACTGACGCT CGATAAGTTGCAACAGTATGCCCGCGAGCACGGCGTGCCGGAGCTTGCTGTACCGCGCGATATTCGCTATCTGAAACAGA TGCCATTACTTGGCAGCGGCAAACCTGACTTTGTCACGTTGAAAAGCTGGGTAGACGAAGCGGAACAACACGATGAGTGA
Upstream 100 bases:
>100_bases GCAGGTTTTTTTTCGCACCTAATTTACTGTCGCTCGCGTTCTTTATCTCGTGTAATCTCCCTCCATTCGCTTTTACTGAA TCAGAGCAAAGGGAGTTGGA
Downstream 100 bases:
>100_bases GTCAGTGCACACTAACACTTCGTTGTGGTCGAAGGGGATGAAAGCGGTTATCGTGGCGCAGTTTCTCTCTGCGTTTGGCG ATAATGCCCTACTGTTTGCC
Product: bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase
Products: NA
Alternate protein names: 2-acylglycerophosphoethanolamine acyltransferase; 2-acyl-GPE acyltransferase; Acyl-[acyl-carrier-protein]--phospholipid O-acyltransferase; Acyl-[acyl-carrier-protein] synthetase; Acyl-ACP synthetase; Long-chain-fatty-acid--[acyl-carrier-protein] ligase [H]
Number of amino acids: Translated: 719; Mature: 719
Protein sequence:
>719_residues MLFSFFRNLCRVLYRVRVTGDTQALKGERVLITPNHVSFIDGILLGLFLPVRPVFAVYTSISQQWYMRWLKSFIDFVPLD PTQPMAIKHLVRLVEQGRPVVIFPEGRITTTGSLMKIYDGAGFVAAKSGATVIPVRIEGAELTHFSRLKGLVKRRLFPQI TLHILPPTQVAMPDASRARDRRKIAGEMLHQIMMEARMAVRPRETLYESLLSAMYRFGAGKKCVEDVNFTPDSYRKLLTK TLFVGRILEKYSVEGERIGLMLPNAGISAAVIFGAIARRRIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWH LPEQLTQVRWVYLEDLKADVTTADKVWIFAHLLMPRLAQVKQQPEEEALILFTSGSEGHPKGVVHSHKSILANVEQIKTI ADFTTNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRSCTVLFGTSTFLGHYARFANPYDFYR LRYVVAGAEKLQESTKQLWLDKFGLRILEGYGVTECAPVVSINVPMAAKPGTVGRILPGMDARLLSVPGIEEGGRLQLKG PNIMNGYLRVEKPGVLEVPTAENVRGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSPDK VHATAIKSDASKGEALVLFTTDNELTLDKLQQYAREHGVPELAVPRDIRYLKQMPLLGSGKPDFVTLKSWVDEAEQHDE
Sequences:
>Translated_719_residues MLFSFFRNLCRVLYRVRVTGDTQALKGERVLITPNHVSFIDGILLGLFLPVRPVFAVYTSISQQWYMRWLKSFIDFVPLD PTQPMAIKHLVRLVEQGRPVVIFPEGRITTTGSLMKIYDGAGFVAAKSGATVIPVRIEGAELTHFSRLKGLVKRRLFPQI TLHILPPTQVAMPDASRARDRRKIAGEMLHQIMMEARMAVRPRETLYESLLSAMYRFGAGKKCVEDVNFTPDSYRKLLTK TLFVGRILEKYSVEGERIGLMLPNAGISAAVIFGAIARRRIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWH LPEQLTQVRWVYLEDLKADVTTADKVWIFAHLLMPRLAQVKQQPEEEALILFTSGSEGHPKGVVHSHKSILANVEQIKTI ADFTTNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRSCTVLFGTSTFLGHYARFANPYDFYR LRYVVAGAEKLQESTKQLWLDKFGLRILEGYGVTECAPVVSINVPMAAKPGTVGRILPGMDARLLSVPGIEEGGRLQLKG PNIMNGYLRVEKPGVLEVPTAENVRGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSPDK VHATAIKSDASKGEALVLFTTDNELTLDKLQQYAREHGVPELAVPRDIRYLKQMPLLGSGKPDFVTLKSWVDEAEQHDE >Mature_719_residues MLFSFFRNLCRVLYRVRVTGDTQALKGERVLITPNHVSFIDGILLGLFLPVRPVFAVYTSISQQWYMRWLKSFIDFVPLD PTQPMAIKHLVRLVEQGRPVVIFPEGRITTTGSLMKIYDGAGFVAAKSGATVIPVRIEGAELTHFSRLKGLVKRRLFPQI TLHILPPTQVAMPDASRARDRRKIAGEMLHQIMMEARMAVRPRETLYESLLSAMYRFGAGKKCVEDVNFTPDSYRKLLTK TLFVGRILEKYSVEGERIGLMLPNAGISAAVIFGAIARRRIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWH LPEQLTQVRWVYLEDLKADVTTADKVWIFAHLLMPRLAQVKQQPEEEALILFTSGSEGHPKGVVHSHKSILANVEQIKTI ADFTTNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRSCTVLFGTSTFLGHYARFANPYDFYR LRYVVAGAEKLQESTKQLWLDKFGLRILEGYGVTECAPVVSINVPMAAKPGTVGRILPGMDARLLSVPGIEEGGRLQLKG PNIMNGYLRVEKPGVLEVPTAENVRGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSPDK VHATAIKSDASKGEALVLFTTDNELTLDKLQQYAREHGVPELAVPRDIRYLKQMPLLGSGKPDFVTLKSWVDEAEQHDE
Specific function: Plays a role in lysophospholipid acylation. Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3-
COG id: COG0318
COG function: function code IQ; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the ATP- dependent AMP-binding enzyme family [H]
Homologues:
Organism=Homo sapiens, GI187761345, Length=386, Percent_Identity=28.2383419689119, Blast_Score=102, Evalue=1e-21, Organism=Homo sapiens, GI187761343, Length=386, Percent_Identity=28.2383419689119, Blast_Score=102, Evalue=1e-21, Organism=Homo sapiens, GI156151445, Length=371, Percent_Identity=26.4150943396226, Blast_Score=97, Evalue=4e-20, Organism=Homo sapiens, GI40807491, Length=389, Percent_Identity=25.706940874036, Blast_Score=94, Evalue=5e-19, Organism=Homo sapiens, GI42544132, Length=365, Percent_Identity=26.3013698630137, Blast_Score=92, Evalue=2e-18, Organism=Homo sapiens, GI38505220, Length=362, Percent_Identity=25.414364640884, Blast_Score=76, Evalue=1e-13, Organism=Homo sapiens, GI157311624, Length=383, Percent_Identity=27.154046997389, Blast_Score=76, Evalue=1e-13, Organism=Homo sapiens, GI157311622, Length=383, Percent_Identity=27.154046997389, Blast_Score=76, Evalue=1e-13, Organism=Homo sapiens, GI58082049, Length=362, Percent_Identity=25.6906077348066, Blast_Score=75, Evalue=2e-13, Organism=Escherichia coli, GI1789201, Length=719, Percent_Identity=99.4436717663421, Blast_Score=1465, Evalue=0.0, Organism=Escherichia coli, GI1788107, Length=489, Percent_Identity=27.4028629856851, Blast_Score=132, Evalue=8e-32, Organism=Escherichia coli, GI145693145, Length=358, Percent_Identity=29.608938547486, Blast_Score=127, Evalue=2e-30, Organism=Escherichia coli, GI1786810, Length=360, Percent_Identity=22.2222222222222, Blast_Score=81, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17558820, Length=340, Percent_Identity=27.3529411764706, Blast_Score=116, Evalue=5e-26, Organism=Caenorhabditis elegans, GI32563687, Length=340, Percent_Identity=27.0588235294118, Blast_Score=107, Evalue=2e-23, Organism=Caenorhabditis elegans, GI71994703, Length=442, Percent_Identity=24.6606334841629, Blast_Score=96, Evalue=8e-20, Organism=Caenorhabditis elegans, GI71994694, Length=442, Percent_Identity=24.6606334841629, Blast_Score=96, Evalue=8e-20, Organism=Caenorhabditis elegans, GI71994690, Length=442, Percent_Identity=24.6606334841629, Blast_Score=95, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17510401, Length=352, Percent_Identity=24.7159090909091, Blast_Score=86, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17560308, Length=365, Percent_Identity=24.3835616438356, Blast_Score=82, Evalue=9e-16, Organism=Caenorhabditis elegans, GI17531443, Length=343, Percent_Identity=28.2798833819242, Blast_Score=76, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17559526, Length=375, Percent_Identity=24.8, Blast_Score=76, Evalue=8e-14, Organism=Caenorhabditis elegans, GI71985884, Length=307, Percent_Identity=24.7557003257329, Blast_Score=74, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6319699, Length=358, Percent_Identity=25.6983240223464, Blast_Score=93, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6320852, Length=346, Percent_Identity=23.4104046242775, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI21355181, Length=521, Percent_Identity=24.1842610364683, Blast_Score=103, Evalue=5e-22, Organism=Drosophila melanogaster, GI24648260, Length=395, Percent_Identity=25.3164556962025, Blast_Score=77, Evalue=4e-14, Organism=Drosophila melanogaster, GI24581924, Length=361, Percent_Identity=23.8227146814404, Blast_Score=76, Evalue=9e-14, Organism=Drosophila melanogaster, GI19922652, Length=372, Percent_Identity=24.4623655913978, Blast_Score=75, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 - InterPro: IPR020845 - InterPro: IPR000873 [H]
Pfam domain/function: PF01553 Acyltransferase; PF00501 AMP-binding [H]
EC number: =2.3.1.40; =6.2.1.20 [H]
Molecular weight: Translated: 80615; Mature: 80615
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFSFFRNLCRVLYRVRVTGDTQALKGERVLITPNHVSFIDGILLGLFLPVRPVFAVYTS CHHHHHHHHHHHHHEEEECCCHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH ISQQWYMRWLKSFIDFVPLDPTQPMAIKHLVRLVEQGRPVVIFPEGRITTTGSLMKIYDG HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCEEECCCEEEEECC AGFVAAKSGATVIPVRIEGAELTHFSRLKGLVKRRLFPQITLHILPPTQVAMPDASRARD CCEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHH RRKIAGEMLHQIMMEARMAVRPRETLYESLLSAMYRFGAGKKCVEDVNFTPDSYRKLLTK HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHH TLFVGRILEKYSVEGERIGLMLPNAGISAAVIFGAIARRRIPAMMNYTAGVKGLTSAITA HHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHH AEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLEDLKADVTTADKVWIFAHLLMPRLAQV HHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH KQQPEEEALILFTSGSEGHPKGVVHSHKSILANVEQIKTIADFTTNDRFMSALPLFHSFG HHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LTVGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRSCTVLFGTSTFLGHYARFANPYDFYR HHHHHHHHHHCCCEEEEECCCCCEEECHHHHCCCCCEEEEECHHHHHHHHHHCCCHHHHH LRYVVAGAEKLQESTKQLWLDKFGLRILEGYGVTECAPVVSINVPMAAKPGTVGRILPGM HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCC DARLLSVPGIEEGGRLQLKGPNIMNGYLRVEKPGVLEVPTAENVRGEMERGWYDTGDIVR CCEEEECCCCCCCCEEEECCCCEEECEEEECCCCEEECCCCCCCCHHHHCCCCCCCCEEE FDEQGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSPDKVHATAIKSDASKGEALVLFT ECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHCCCCCCCEEEEEE TDNELTLDKLQQYAREHGVPELAVPRDIRYLKQMPLLGSGKPDFVTLKSWVDEAEQHDE CCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHCCC >Mature Secondary Structure MLFSFFRNLCRVLYRVRVTGDTQALKGERVLITPNHVSFIDGILLGLFLPVRPVFAVYTS CHHHHHHHHHHHHHEEEECCCHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH ISQQWYMRWLKSFIDFVPLDPTQPMAIKHLVRLVEQGRPVVIFPEGRITTTGSLMKIYDG HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCEEECCCEEEEECC AGFVAAKSGATVIPVRIEGAELTHFSRLKGLVKRRLFPQITLHILPPTQVAMPDASRARD CCEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHH RRKIAGEMLHQIMMEARMAVRPRETLYESLLSAMYRFGAGKKCVEDVNFTPDSYRKLLTK HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHH TLFVGRILEKYSVEGERIGLMLPNAGISAAVIFGAIARRRIPAMMNYTAGVKGLTSAITA HHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHH AEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLEDLKADVTTADKVWIFAHLLMPRLAQV HHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH KQQPEEEALILFTSGSEGHPKGVVHSHKSILANVEQIKTIADFTTNDRFMSALPLFHSFG HHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LTVGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRSCTVLFGTSTFLGHYARFANPYDFYR HHHHHHHHHHCCCEEEEECCCCCEEECHHHHCCCCCEEEEECHHHHHHHHHHCCCHHHHH LRYVVAGAEKLQESTKQLWLDKFGLRILEGYGVTECAPVVSINVPMAAKPGTVGRILPGM HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCC DARLLSVPGIEEGGRLQLKGPNIMNGYLRVEKPGVLEVPTAENVRGEMERGWYDTGDIVR CCEEEECCCCCCCCEEEECCCCEEECEEEECCCCEEECCCCCCCCHHHHCCCCCCCCEEE FDEQGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSPDKVHATAIKSDASKGEALVLFT ECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHCCCCCCCEEEEEE TDNELTLDKLQQYAREHGVPELAVPRDIRYLKQMPLLGSGKPDFVTLKSWVDEAEQHDE CCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA