Definition Shigella boydii Sb227, complete genome.
Accession NC_007613
Length 4,519,823

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The map label for this gene is yfiL [H]

Identifier: 82545058

GI number: 82545058

Start: 2645200

End: 2645565

Strand: Direct

Name: yfiL [H]

Synonym: SBO_2640

Alternate gene names: 82545058

Gene position: 2645200-2645565 (Clockwise)

Preceding gene: 82545055

Following gene: 82545059

Centisome position: 58.52

GC content: 45.9

Gene sequence:

>366_bases
ATGATGAAAAAGTTTATCGCCCCCTTATTGGCTTTACTGGTTAGCGGATGTCAGATTGATCCTTATACTCACGCGCCAAC
CTTGACCAGCACCGACTGGTATGATGTCGGTATGGAAGATGCGATATCGGGCAGCGCCATAAAAGATGACGATGCATTTG
GCGATTCACAGGCGGATCGCGGTCTATACCTTAAAGGATATGCCGAAGGACAAAAGAAAACTTGCCAGACCGATTTTACT
TATGCCCGGGGACTTTCCGGTAAAAGCTTTCCTGCCAGCTGTAACAATGTTGAAAGTGCCAGCCAACTGCATGAAGTATG
GCAAAAAGGGGCTGATGAAAATGCCAGCACAATACGATTAAATTAA

Upstream 100 bases:

>100_bases
TTACACGAACAATTTACTCGCGCTTTGATGCTTATTTCGTACAAATAAATTTACACCCCCTTTAAAAACAATCCGCTATG
CTTTGAAAAAGGAGAAAGAA

Downstream 100 bases:

>100_bases
TTAAAACCCCACAAATAAATTAAACATAAGATTTTACTCATTGTGTTTTATTTCTCACATTGATGACGATCGCATGAAAA
AATGATATTTTAATGAGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: URF2 [H]

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MMKKFIAPLLALLVSGCQIDPYTHAPTLTSTDWYDVGMEDAISGSAIKDDDAFGDSQADRGLYLKGYAEGQKKTCQTDFT
YARGLSGKSFPASCNNVESASQLHEVWQKGADENASTIRLN

Sequences:

>Translated_121_residues
MMKKFIAPLLALLVSGCQIDPYTHAPTLTSTDWYDVGMEDAISGSAIKDDDAFGDSQADRGLYLKGYAEGQKKTCQTDFT
YARGLSGKSFPASCNNVESASQLHEVWQKGADENASTIRLN
>Mature_121_residues
MMKKFIAPLLALLVSGCQIDPYTHAPTLTSTDWYDVGMEDAISGSAIKDDDAFGDSQADRGLYLKGYAEGQKKTCQTDFT
YARGLSGKSFPASCNNVESASQLHEVWQKGADENASTIRLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082135, Length=121, Percent_Identity=98.3471074380165, Blast_Score=251, Evalue=1e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021242 [H]

Pfam domain/function: PF10973 DUF2799 [H]

EC number: NA

Molecular weight: Translated: 13147; Mature: 13147

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKKFIAPLLALLVSGCQIDPYTHAPTLTSTDWYDVGMEDAISGSAIKDDDAFGDSQADR
CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCC
GLYLKGYAEGQKKTCQTDFTYARGLSGKSFPASCNNVESASQLHEVWQKGADENASTIRL
CEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEE
N
C
>Mature Secondary Structure
MMKKFIAPLLALLVSGCQIDPYTHAPTLTSTDWYDVGMEDAISGSAIKDDDAFGDSQADR
CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCC
GLYLKGYAEGQKKTCQTDFTYARGLSGKSFPASCNNVESASQLHEVWQKGADENASTIRL
CEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEE
N
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6396419; 9205837; 9278503 [H]