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The map label for this gene is yphH [H]

Identifier: 82545002

GI number: 82545002

Start: 2580068

End: 2581267

Strand: Direct

Name: yphH [H]

Synonym: SBO_2578

Alternate gene names: 82545002

Gene position: 2580068-2581267 (Clockwise)

Preceding gene: 82545000

Following gene: 82545004

Centisome position: 57.08

GC content: 51.17

Gene sequence:

>1200_bases
GTGAAGATGAGAGCCTGCATTAACAATCAACAGATTCGCCACCATAACAAATGCGTGATTCTGGAACTGCTGTACCGGCA
AAAGCGCGCCAATAAATCAACGCTGGCCCGGCTGGCGCAAATTTCGATTCCGGCAGTCAGTAATATTTTGCAGGAACTGG
AAAGCGAAAAACGGGTGGTGAATATTGACGATGAAAGCCAGACGCGCGGGCATAGTAGCGGTACATGGCTGATTGCGCCG
GAAGGTGACTGGACGCTGTGCCTGAACGTGACGCCCACCAGTATTGAGTGTCAGGTTGCTAATGCTTGTTTAAGTCCGAA
AGGTGAATTTGAGTATTTACAGATTGATGCACCGACGCCGCAGGCGCTGCTGTCCGAAATCGAAAAATGCTGGCATCGCC
ACCGTAAATTGTGGCCGGACCGCACCATCAATCTGGCGCTGGCAATCCACGGTCAGGTTGATCCGGTGACCGGCGTGTCG
CAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTTGAGGTGAAGTATCTGCTGGAAGAGAAGCTGGGCATTCGGGTGAT
GGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCA
ACGTTGATTACGGCATTGGCTCGTCGTTCGTGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAAATT
GGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGACTGTGGACGTTACGGCTGCCTGGAAACCGTCGCCTCGTTAAG
TGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGTTAATACTCAGCTTGATCCTGAAAAACTGACAACCG
CGCAGTTAATCGCTGCCTGGCAGAGTGGAGAACCGTGGATCACCAGCTGGGTTGATCGCTCTGCCAATGCCATTGGTTTG
AGTCTGTATAACTTCCTCAACATCCTCAATATTAATCAGATTTGGTTGTACGGTCGCAGTTGTGCCTTTGGTGAGAACTG
GCTTAATACTATTATTCGCCAGACAGGATTTAACCCGTTCGACCGCGACGAAGGACCGAGCGTGAAAGCGACGCAAATTG
GCTTCGGGCAATTAAGCCGCGCACAACAGGTGCTGGGAATTGGCTATTTGTATGTTGAGGCGCAGTTACGACAGATTTGA

Upstream 100 bases:

>100_bases
TATTAACAAGACATACTGAATTAAAAGATTTGTGGCAGTGTATTGAACAATCTGGCAATGTTTTCGCGGAATAATCACGC
AATTAACTAAACAAGGTTTA

Downstream 100 bases:

>100_bases
TGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTTTTTCAACAGATTAACCGTTTCGCTTATGCGTAAACCGGGT
AACGTGCGCAGATGTCGAGA

Product: NAGC-like transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MKMRACINNQQIRHHNKCVILELLYRQKRANKSTLARLAQISIPAVSNILQELESEKRVVNIDDESQTRGHSSGTWLIAP
EGDWTLCLNVTPTSIECQVANACLSPKGEFEYLQIDAPTPQALLSEIEKCWHRHRKLWPDRTINLALAIHGQVDPVTGVS
QTMPQAPWTTPVEVKYLLEEKLGIRVMVDNDCVMLALAEKWQNNSQERDFCVINVDYGIGSSFVINEQIYRGSLYGSGQI
GHTIVNPDGVVCDCGRYGCLETVASLSALKKQARVWLKSQPVNTQLDPEKLTTAQLIAAWQSGEPWITSWVDRSANAIGL
SLYNFLNILNINQIWLYGRSCAFGENWLNTIIRQTGFNPFDRDEGPSVKATQIGFGQLSRAQQVLGIGYLYVEAQLRQI

Sequences:

>Translated_399_residues
MKMRACINNQQIRHHNKCVILELLYRQKRANKSTLARLAQISIPAVSNILQELESEKRVVNIDDESQTRGHSSGTWLIAP
EGDWTLCLNVTPTSIECQVANACLSPKGEFEYLQIDAPTPQALLSEIEKCWHRHRKLWPDRTINLALAIHGQVDPVTGVS
QTMPQAPWTTPVEVKYLLEEKLGIRVMVDNDCVMLALAEKWQNNSQERDFCVINVDYGIGSSFVINEQIYRGSLYGSGQI
GHTIVNPDGVVCDCGRYGCLETVASLSALKKQARVWLKSQPVNTQLDPEKLTTAQLIAAWQSGEPWITSWVDRSANAIGL
SLYNFLNILNINQIWLYGRSCAFGENWLNTIIRQTGFNPFDRDEGPSVKATQIGFGQLSRAQQVLGIGYLYVEAQLRQI
>Mature_399_residues
MKMRACINNQQIRHHNKCVILELLYRQKRANKSTLARLAQISIPAVSNILQELESEKRVVNIDDESQTRGHSSGTWLIAP
EGDWTLCLNVTPTSIECQVANACLSPKGEFEYLQIDAPTPQALLSEIEKCWHRHRKLWPDRTINLALAIHGQVDPVTGVS
QTMPQAPWTTPVEVKYLLEEKLGIRVMVDNDCVMLALAEKWQNNSQERDFCVINVDYGIGSSFVINEQIYRGSLYGSGQI
GHTIVNPDGVVCDCGRYGCLETVASLSALKKQARVWLKSQPVNTQLDPEKLTTAQLIAAWQSGEPWITSWVDRSANAIGL
SLYNFLNILNINQIWLYGRSCAFGENWLNTIIRQTGFNPFDRDEGPSVKATQIGFGQLSRAQQVLGIGYLYVEAQLRQI

Specific function: Unknown

COG id: COG1940

COG function: function code KG; Transcriptional regulator/sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ROK (nagC/xylR) family [H]

Homologues:

Organism=Homo sapiens, GI298566315, Length=222, Percent_Identity=27.4774774774775, Blast_Score=73, Evalue=4e-13,
Organism=Homo sapiens, GI298566325, Length=222, Percent_Identity=27.4774774774775, Blast_Score=73, Evalue=4e-13,
Organism=Homo sapiens, GI4885285, Length=222, Percent_Identity=27.4774774774775, Blast_Score=73, Evalue=4e-13,
Organism=Homo sapiens, GI190014632, Length=222, Percent_Identity=27.4774774774775, Blast_Score=73, Evalue=5e-13,
Organism=Escherichia coli, GI87082127, Length=397, Percent_Identity=99.4962216624685, Blast_Score=817, Evalue=0.0,
Organism=Escherichia coli, GI1787878, Length=333, Percent_Identity=24.3243243243243, Blast_Score=99, Evalue=6e-22,
Organism=Escherichia coli, GI1786891, Length=345, Percent_Identity=24.6376811594203, Blast_Score=83, Evalue=3e-17,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000600
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00480 ROK [H]

EC number: NA

Molecular weight: Translated: 44827; Mature: 44827

Theoretical pI: Translated: 6.83; Mature: 6.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMRACINNQQIRHHNKCVILELLYRQKRANKSTLARLAQISIPAVSNILQELESEKRVV
CCCHHHCCCCHHHHCCCEEEHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCEE
NIDDESQTRGHSSGTWLIAPEGDWTLCLNVTPTSIECQVANACLSPKGEFEYLQIDAPTP
ECCCCHHCCCCCCCEEEEEECCCEEEEEEECCCCEEEEEEHHHCCCCCCEEEEEECCCCH
QALLSEIEKCWHRHRKLWPDRTINLALAIHGQVDPVTGVSQTMPQAPWTTPVEVKYLLEE
HHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCHHHHCCCCCCCCCHHHHHEEHH
KLGIRVMVDNDCVMLALAEKWQNNSQERDFCVINVDYGIGSSFVINEQIYRGSLYGSGQI
CCCEEEEECCCEEEEEEHHHHCCCCCCCCEEEEEECCCCCCEEEEECHHEECCCCCCCCC
GHTIVNPDGVVCDCGRYGCLETVASLSALKKQARVWLKSQPVNTQLDPEKLTTAQLIAAW
CCEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHH
QSGEPWITSWVDRSANAIGLSLYNFLNILNINQIWLYGRSCAFGENWLNTIIRQTGFNPF
CCCCCHHHHHHHCCCCEEHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCC
DRDEGPSVKATQIGFGQLSRAQQVLGIGYLYVEAQLRQI
CCCCCCCEEEEEECCHHHHHHHHHHHEEEEEEEEHHHCC
>Mature Secondary Structure
MKMRACINNQQIRHHNKCVILELLYRQKRANKSTLARLAQISIPAVSNILQELESEKRVV
CCCHHHCCCCHHHHCCCEEEHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCEE
NIDDESQTRGHSSGTWLIAPEGDWTLCLNVTPTSIECQVANACLSPKGEFEYLQIDAPTP
ECCCCHHCCCCCCCEEEEEECCCEEEEEEECCCCEEEEEEHHHCCCCCCEEEEEECCCCH
QALLSEIEKCWHRHRKLWPDRTINLALAIHGQVDPVTGVSQTMPQAPWTTPVEVKYLLEE
HHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCHHHHCCCCCCCCCHHHHHEEHH
KLGIRVMVDNDCVMLALAEKWQNNSQERDFCVINVDYGIGSSFVINEQIYRGSLYGSGQI
CCCEEEEECCCEEEEEEHHHHCCCCCCCCEEEEEECCCCCCEEEEECHHEECCCCCCCCC
GHTIVNPDGVVCDCGRYGCLETVASLSALKKQARVWLKSQPVNTQLDPEKLTTAQLIAAW
CCEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHH
QSGEPWITSWVDRSANAIGLSLYNFLNILNINQIWLYGRSCAFGENWLNTIIRQTGFNPF
CCCCCHHHHHHHCCCCEEHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCC
DRDEGPSVKATQIGFGQLSRAQQVLGIGYLYVEAQLRQI
CCCCCCCEEEEEECCHHHHHHHHHHHEEEEEEEEHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]