Click here to switch to the map view.

The map label for this gene is yphA [H]

Identifier: 82544993

GI number: 82544993

Start: 2569786

End: 2570253

Strand: Direct

Name: yphA [H]

Synonym: SBO_2569

Alternate gene names: 82544993

Gene position: 2569786-2570253 (Clockwise)

Preceding gene: 82544992

Following gene: 82545000

Centisome position: 56.86

GC content: 48.29

Gene sequence:

>468_bases
GTGTGTATTACGTTTAAATCACATTATCTTGCAAAGGGATTGGTTATGAACACACTACGTTATTTTGATTTTGGAGCTGC
CCGCCCCGTTTTGTTATTAATTGCCCGTATCGCCGTGGTCTTAATTTTCATTATTTTGGGTTTTCCCAAAATGATGGGCT
TTGACGGTACGGTCCAATATATGGCCTCGTTGGGCGCGCCAATGCCGATGCTGGCAGCGATTATTGCGGTAGTTATGGAA
GTGCCCGCCGCGATATTAATCGTGCTTGGCTTTTTCACCCGTCCGCTGGCGGTGCTGTTTATTTTCTACACGCTGGGTAC
GGCGGTGATTGGTCACCATTACTGGGATATGACCGGCGATGCGGTTGGGCCAAATATGATTAATTTCTGGAAGAATGTCA
GTATCGCTGGCGCGTTCTTGCTATTGGCAATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAG

Upstream 100 bases:

>100_bases
TGATGCGAAACTGCTGATAGATGAGAACATCGCGCTTAAATCACTGTAACCAGGATAATTAGCGAATATCTCAACGCCTG
GGGCGTGGCGAGGTGCAAGA

Downstream 100 bases:

>100_bases
GAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGA
AGTTGTTGATTCCCCTGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MCITFKSHYLAKGLVMNTLRYFDFGAARPVLLLIARIAVVLIFIILGFPKMMGFDGTVQYMASLGAPMPMLAAIIAVVME
VPAAILIVLGFFTRPLAVLFIFYTLGTAVIGHHYWDMTGDAVGPNMINFWKNVSIAGAFLLLAITGPGAISLDRR

Sequences:

>Translated_155_residues
MCITFKSHYLAKGLVMNTLRYFDFGAARPVLLLIARIAVVLIFIILGFPKMMGFDGTVQYMASLGAPMPMLAAIIAVVME
VPAAILIVLGFFTRPLAVLFIFYTLGTAVIGHHYWDMTGDAVGPNMINFWKNVSIAGAFLLLAITGPGAISLDRR
>Mature_155_residues
MCITFKSHYLAKGLVMNTLRYFDFGAARPVLLLIARIAVVLIFIILGFPKMMGFDGTVQYMASLGAPMPMLAAIIAVVME
VPAAILIVLGFFTRPLAVLFIFYTLGTAVIGHHYWDMTGDAVGPNMINFWKNVSIAGAFLLLAITGPGAISLDRR

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the doxX family [H]

Homologues:

Organism=Escherichia coli, GI145693171, Length=140, Percent_Identity=99.2857142857143, Blast_Score=274, Evalue=2e-75,
Organism=Escherichia coli, GI87082210, Length=127, Percent_Identity=42.5196850393701, Blast_Score=86, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011637 [H]

Pfam domain/function: PF07681 DoxX [H]

EC number: NA

Molecular weight: Translated: 16871; Mature: 16871

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCITFKSHYLAKGLVMNTLRYFDFGAARPVLLLIARIAVVLIFIILGFPKMMGFDGTVQY
CEEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
MASLGAPMPMLAAIIAVVMEVPAAILIVLGFFTRPLAVLFIFYTLGTAVIGHHYWDMTGD
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AVGPNMINFWKNVSIAGAFLLLAITGPGAISLDRR
CCCCHHHHHHHHHHHHHHHHHHEECCCCCEECCCC
>Mature Secondary Structure
MCITFKSHYLAKGLVMNTLRYFDFGAARPVLLLIARIAVVLIFIILGFPKMMGFDGTVQY
CEEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
MASLGAPMPMLAAIIAVVMEVPAAILIVLGFFTRPLAVLFIFYTLGTAVIGHHYWDMTGD
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AVGPNMINFWKNVSIAGAFLLLAITGPGAISLDRR
CCCCHHHHHHHHHHHHHHHHHHEECCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]