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The map label for this gene is yfhR [H]

Identifier: 82544983

GI number: 82544983

Start: 2559571

End: 2560452

Strand: Direct

Name: yfhR [H]

Synonym: SBO_2558

Alternate gene names: 82544983

Gene position: 2559571-2560452 (Clockwise)

Preceding gene: 82544982

Following gene: 161984883

Centisome position: 56.63

GC content: 49.55

Gene sequence:

>882_bases
ATGATAAAGAAGTCACAAGGAAAGGTTATGGCGCTGCCAGTGAACAAACGCGTTCTCAAAATTCTGTTTATTCTCTTTGT
TGTTGCCTTCTGCGTTTATTTAGTGCCGCGCGTTGCCATCAACTTCTTCTATTATCCTGACGATAAAATTTACGGTCCCG
ACCCCTGGTCGGCGGAATCCGTCGAATTTACGGCTAAGGACGGTACTCGTCTGCAAGGCTGGTTTATTCCTTCTTCGACG
GGCCCTGCTGACAATGCCATCGCAACCATCATTCATGCTCACGGCAATGCCGGAAATATGTCCGCCCACTGGCCGCTGGT
CAGTTGGTTACCCGAGCGTAATTTCAACGTTTTTATGTTTGATTATCGCGGGTTTGGTAAATCAAAAGGCACGCCGTCCC
AGGCCGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGGCTGGTG
CTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTTGCTGTTATTGGTCAGGATGATCGTGAAGGCATACGTGCGGTGAT
CCTCGACTCCACATTTGCCTCTTATGCAACCATCGCCAATCAGATGATCCCCGGCAGTGGCTACTTACTTGATGAGAGTT
ACAGCGGCGAAAATTATATCGCCAGCGTCAGCCCGATCCCGCTTTTACTCATTCACGGTAAAGCTGATCACGTTATCCCA
TGGCAGCACAGCGAAAAGTTGTATAGCCTGGCAAAAGAGACAAAACGGTTGATCCTAATCCCGGATGGCGAACACATTGA
TGCTTTTTCCGATCGTCACGGCGATGTTTATCGCGAACAGATGGTGGACTTTATCCTTAGCGCGTTGAATCCGCAGAACT
AA

Upstream 100 bases:

>100_bases
GTCACTCACCCGCCCTCGCCTTTCAGGCGCTATTCCGAAATACTTCCTCACCGCTTTACTTTCTTTCGTCACTCTCCCAC
CATCTTTCCCCGATTAATGG

Downstream 100 bases:

>100_bases
CCCATGATCGCTAGCACGATAATCATTCACAAAACCACCTTAAGACATGCTAATCCACTGGTCAGAACAGTTTAAGATGA
GAAAAATTCTGTGACGCTTG

Product: enzyme

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MIKKSQGKVMALPVNKRVLKILFILFVVAFCVYLVPRVAINFFYYPDDKIYGPDPWSAESVEFTAKDGTRLQGWFIPSST
GPADNAIATIIHAHGNAGNMSAHWPLVSWLPERNFNVFMFDYRGFGKSKGTPSQAGLLDDTQSAINVVRHRSDVNPQRLV
LFGQSIGGANILAVIGQDDREGIRAVILDSTFASYATIANQMIPGSGYLLDESYSGENYIASVSPIPLLLIHGKADHVIP
WQHSEKLYSLAKETKRLILIPDGEHIDAFSDRHGDVYREQMVDFILSALNPQN

Sequences:

>Translated_293_residues
MIKKSQGKVMALPVNKRVLKILFILFVVAFCVYLVPRVAINFFYYPDDKIYGPDPWSAESVEFTAKDGTRLQGWFIPSST
GPADNAIATIIHAHGNAGNMSAHWPLVSWLPERNFNVFMFDYRGFGKSKGTPSQAGLLDDTQSAINVVRHRSDVNPQRLV
LFGQSIGGANILAVIGQDDREGIRAVILDSTFASYATIANQMIPGSGYLLDESYSGENYIASVSPIPLLLIHGKADHVIP
WQHSEKLYSLAKETKRLILIPDGEHIDAFSDRHGDVYREQMVDFILSALNPQN
>Mature_293_residues
MIKKSQGKVMALPVNKRVLKILFILFVVAFCVYLVPRVAINFFYYPDDKIYGPDPWSAESVEFTAKDGTRLQGWFIPSST
GPADNAIATIIHAHGNAGNMSAHWPLVSWLPERNFNVFMFDYRGFGKSKGTPSQAGLLDDTQSAINVVRHRSDVNPQRLV
LFGQSIGGANILAVIGQDDREGIRAVILDSTFASYATIANQMIPGSGYLLDESYSGENYIASVSPIPLLLIHGKADHVIP
WQHSEKLYSLAKETKRLILIPDGEHIDAFSDRHGDVYREQMVDFILSALNPQN

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the serine esterase family [H]

Homologues:

Organism=Homo sapiens, GI49355781, Length=265, Percent_Identity=29.811320754717, Blast_Score=101, Evalue=7e-22,
Organism=Homo sapiens, GI151301175, Length=207, Percent_Identity=30.4347826086957, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI71051602, Length=227, Percent_Identity=28.1938325991189, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI194306564, Length=235, Percent_Identity=28.5106382978723, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI71051600, Length=227, Percent_Identity=28.1938325991189, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI194306562, Length=214, Percent_Identity=29.4392523364486, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI32451492, Length=198, Percent_Identity=28.2828282828283, Blast_Score=72, Evalue=8e-13,
Organism=Homo sapiens, GI32528310, Length=198, Percent_Identity=28.2828282828283, Blast_Score=72, Evalue=9e-13,
Organism=Homo sapiens, GI109689718, Length=185, Percent_Identity=30.8108108108108, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI24308097, Length=185, Percent_Identity=30.8108108108108, Blast_Score=68, Evalue=1e-11,
Organism=Escherichia coli, GI226510965, Length=284, Percent_Identity=98.2394366197183, Blast_Score=572, Evalue=1e-165,
Organism=Caenorhabditis elegans, GI71988362, Length=206, Percent_Identity=28.1553398058252, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI71997133, Length=186, Percent_Identity=23.6559139784946, Blast_Score=66, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6324009, Length=233, Percent_Identity=30.0429184549356, Blast_Score=97, Evalue=3e-21,
Organism=Drosophila melanogaster, GI17137566, Length=249, Percent_Identity=30.5220883534137, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI281362521, Length=236, Percent_Identity=26.271186440678, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI281362519, Length=236, Percent_Identity=26.271186440678, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI28571878, Length=236, Percent_Identity=26.271186440678, Blast_Score=86, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001375 [H]

Pfam domain/function: PF00326 Peptidase_S9 [H]

EC number: NA

Molecular weight: Translated: 32523; Mature: 32523

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKKSQGKVMALPVNKRVLKILFILFVVAFCVYLVPRVAINFFYYPDDKIYGPDPWSAES
CCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCC
VEFTAKDGTRLQGWFIPSSTGPADNAIATIIHAHGNAGNMSAHWPLVSWLPERNFNVFMF
EEEEECCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCHHEECCCCCCEEEEE
DYRGFGKSKGTPSQAGLLDDTQSAINVVRHRSDVNPQRLVLFGQSIGGANILAVIGQDDR
EECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEECCCCC
EGIRAVILDSTFASYATIANQMIPGSGYLLDESYSGENYIASVSPIPLLLIHGKADHVIP
CCEEEEEEECHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEECCCCEEEEEECCCCCCCC
WQHSEKLYSLAKETKRLILIPDGEHIDAFSDRHGDVYREQMVDFILSALNPQN
CCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIKKSQGKVMALPVNKRVLKILFILFVVAFCVYLVPRVAINFFYYPDDKIYGPDPWSAES
CCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCC
VEFTAKDGTRLQGWFIPSSTGPADNAIATIIHAHGNAGNMSAHWPLVSWLPERNFNVFMF
EEEEECCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCHHEECCCCCCEEEEE
DYRGFGKSKGTPSQAGLLDDTQSAINVVRHRSDVNPQRLVLFGQSIGGANILAVIGQDDR
EECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEECCCCC
EGIRAVILDSTFASYATIANQMIPGSGYLLDESYSGENYIASVSPIPLLLIHGKADHVIP
CCEEEEEEECHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEECCCCEEEEEECCCCCCCC
WQHSEKLYSLAKETKRLILIPDGEHIDAFSDRHGDVYREQMVDFILSALNPQN
CCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]