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The map label for this gene is yfeD [H]

Identifier: 82544865

GI number: 82544865

Start: 2420834

End: 2421226

Strand: Direct

Name: yfeD [H]

Synonym: SBO_2425

Alternate gene names: 82544865

Gene position: 2420834-2421226 (Clockwise)

Preceding gene: 82544864

Following gene: 82544867

Centisome position: 53.56

GC content: 45.8

Gene sequence:

>393_bases
ATGAAAAGATTACGCAATAAAATGACCACCGAAGAACTGGCTGAATGCCTCGGTGTGGCTAAACAAACTGTTAACCGTTG
GATCAGAGAAAAAGGCTGGAAAACGGAAAAATTTCCCGGCGTGAAAGGCGGTCGTGCCAGACTTATTCTGGTCGATACGC
AAGTTTGCGAGTTTATTCAGAACACGCCAGCCTTCCATAACACACCAATGTTGATGGAAGCTGAAGAGAGAATTGCTGAA
TACGCTCCTGGAGTACGCGCCCCGGCGTATCGACAAATCATCAACGCGATAGATAATATGACAGACATTGAGCAGGAAAA
AGTCGCGCAATTTTTGTCACGTGAAGGAATTCGCAATTTCCTCGCCCGTCTCGATATTGACGAATCAGCATAA

Upstream 100 bases:

>100_bases
GAGATGACGCCAGTTGAACAAAAACAGTTTACATCCTTGCTTCTGCGGGAAGGGATTATCGGATTGTTACAACGCTTAGG
GATTCGCGATAGCAAATAAT

Downstream 100 bases:

>100_bases
ATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTATGCGCTAATTACTGCTGGTTTTCGCGTTCAGCAATAAA
AGCCAGCGCTTTGTTGATAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MKRLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQNTPAFHNTPMLMEAEERIAE
YAPGVRAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNFLARLDIDESA

Sequences:

>Translated_130_residues
MKRLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQNTPAFHNTPMLMEAEERIAE
YAPGVRAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNFLARLDIDESA
>Mature_130_residues
MKRLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQNTPAFHNTPMLMEAEERIAE
YAPGVRAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNFLARLDIDESA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI226510963, Length=130, Percent_Identity=99.2307692307692, Blast_Score=268, Evalue=8e-74,
Organism=Escherichia coli, GI87082097, Length=124, Percent_Identity=39.5161290322581, Blast_Score=84, Evalue=3e-18,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR010749
- InterPro:   IPR011991
- ProDom:   PD060594 [H]

Pfam domain/function: PF07037 DUF1323 [H]

EC number: NA

Molecular weight: Translated: 14938; Mature: 14938

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ
CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECHHHHHHHH
NTPAFHNTPMLMEAEERIAEYAPGVRAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNF
CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LARLDIDESA
HHHHCCCCCC
>Mature Secondary Structure
MKRLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ
CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECHHHHHHHH
NTPAFHNTPMLMEAEERIAEYAPGVRAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNF
CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LARLDIDESA
HHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2201776; 9205837; 9278503 [H]