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The map label for this gene is dsdA [H]

Identifier: 82544834

GI number: 82544834

Start: 2381236

End: 2382462

Strand: Direct

Name: dsdA [H]

Synonym: SBO_2392

Alternate gene names: 82544834

Gene position: 2381236-2382462 (Clockwise)

Preceding gene: 82544832

Following gene: 82544837

Centisome position: 52.68

GC content: 51.18

Gene sequence:

>1227_bases
TTGGCTGAAGGTTTACCTTATGTTGGCCTGACCGAACAGGATGTTCAGGACGCCCATGCGCGCTTATCCCGTTTTGCACC
CTATCTGGCAAAAGCATTTGCTGAAACTGCTGCCACTGGGGGGATTATTGAATCAGAACTGGTTGCCATTCCAGCTATGC
AAAAACGGCTGGAAAAAGAATATCAGCAACCGATCAGCGGGCAACTGTTACTGAAAAAAGATAGCCATTTGCCCATTTCC
AGCTCCATAAAAGCACGCGGCGGGATTTATGAAGTCCTGGCACACGCAGAAAAACTGGCTCTGGAAGCGGGGTTGCTGAC
GCTTGATGATGACTACAGCAAACTGCTTTCTCCGGAGTTTAAACAGTTCTTTAGCCAATACAGCATTGCTGTGGGCTCAA
CCGGAAATCTGGGGTTATCAATCGGCATTATGAGCGCCCGCATTGGCTTTAAGGTGACAGTTCATATGTCTGCTGATGCC
CGGGCATGGAAAAAAGCGAAACTGCGCAGCCATGGCGTTACGGTCGTGGAATATGAGCAAGATTATGGTGTTGCCGTCGA
GGAAGGACGTAAAGCAGCGCAGTCTGACCCGAACTGTTTCTTTATTGATGACGAAAATTCCCGCACGTTGTTCCTTGGGT
ATTCCGTCGCTGGCCAGCGTCTTAAAGCGCAATTTGCCCAGCAAGGCCGTATCGTCGATGCTGATAACCCTCTGTTTGTC
TATCTGCCGTGTGGTGTTGGCGGTGGTCCTGGTGGCGTCGCATTCGGGCTTAAACTGGCGTTTGGCGATCATGTTCACTG
CTTTTTTGCCGAACCAACGCACTCCCCTTGTATGTTGTTAGGCGTCCATACAGGATTACACGATCAGATTTCTGTTCAGG
ATATTGGTATCGACAACCTTACCGCAGCGGATGGCCTTGCAGTTGGTCGCGCATCAGGCTTTGTCGGGCGGGCAATGGTG
CGTCTGCTGGATGGCTTCTATACCCTTAGCGATCAAACCATGTATGACATGCTTGGCTGGCTGGCGCAGGAAGAAGGTAT
TCGTCTTGAACCTTCGGCACTGGCGGGTATGGCCGGACCTCAGCGCGTGTGTGCATCAGTAAGTTACCAACAGATGCACG
GTTTCAGCGCAGAACAACTGCGTAATACCACTCATCTGGTGTGGGCGACGGGAGGTGGAATGGTGCCGGAAGAAGAGATG
AATCAATATCTGGCAAAAGGCCGTTAA

Upstream 100 bases:

>100_bases
CAGCGCTTACCCGTCCAGATACAGGTCACATCACCGCACCACACCTGATTTGGCTCAGTCACGGCGAACTGCCTTTCAAG
GTTGAAGTGGCACGACCTCA

Downstream 100 bases:

>100_bases
TAACGTTTCAACGCAGCATCGCAATCCTTTCCCTGGGTGAGCGATGCTGCCGATGGCGCAGACTTAAGATCCCCGGTCTT
ACCCGCTATAACCCCCTCCT

Product: D-serine dehydratase

Products: NA

Alternate protein names: D-serine deaminase; DSD [H]

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MAEGLPYVGLTEQDVQDAHARLSRFAPYLAKAFAETAATGGIIESELVAIPAMQKRLEKEYQQPISGQLLLKKDSHLPIS
SSIKARGGIYEVLAHAEKLALEAGLLTLDDDYSKLLSPEFKQFFSQYSIAVGSTGNLGLSIGIMSARIGFKVTVHMSADA
RAWKKAKLRSHGVTVVEYEQDYGVAVEEGRKAAQSDPNCFFIDDENSRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFV
YLPCGVGGGPGGVAFGLKLAFGDHVHCFFAEPTHSPCMLLGVHTGLHDQISVQDIGIDNLTAADGLAVGRASGFVGRAMV
RLLDGFYTLSDQTMYDMLGWLAQEEGIRLEPSALAGMAGPQRVCASVSYQQMHGFSAEQLRNTTHLVWATGGGMVPEEEM
NQYLAKGR

Sequences:

>Translated_408_residues
MAEGLPYVGLTEQDVQDAHARLSRFAPYLAKAFAETAATGGIIESELVAIPAMQKRLEKEYQQPISGQLLLKKDSHLPIS
SSIKARGGIYEVLAHAEKLALEAGLLTLDDDYSKLLSPEFKQFFSQYSIAVGSTGNLGLSIGIMSARIGFKVTVHMSADA
RAWKKAKLRSHGVTVVEYEQDYGVAVEEGRKAAQSDPNCFFIDDENSRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFV
YLPCGVGGGPGGVAFGLKLAFGDHVHCFFAEPTHSPCMLLGVHTGLHDQISVQDIGIDNLTAADGLAVGRASGFVGRAMV
RLLDGFYTLSDQTMYDMLGWLAQEEGIRLEPSALAGMAGPQRVCASVSYQQMHGFSAEQLRNTTHLVWATGGGMVPEEEM
NQYLAKGR
>Mature_407_residues
AEGLPYVGLTEQDVQDAHARLSRFAPYLAKAFAETAATGGIIESELVAIPAMQKRLEKEYQQPISGQLLLKKDSHLPISS
SIKARGGIYEVLAHAEKLALEAGLLTLDDDYSKLLSPEFKQFFSQYSIAVGSTGNLGLSIGIMSARIGFKVTVHMSADAR
AWKKAKLRSHGVTVVEYEQDYGVAVEEGRKAAQSDPNCFFIDDENSRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFVY
LPCGVGGGPGGVAFGLKLAFGDHVHCFFAEPTHSPCMLLGVHTGLHDQISVQDIGIDNLTAADGLAVGRASGFVGRAMVR
LLDGFYTLSDQTMYDMLGWLAQEEGIRLEPSALAGMAGPQRVCASVSYQQMHGFSAEQLRNTTHLVWATGGGMVPEEEMN
QYLAKGR

Specific function: Unknown

COG id: COG3048

COG function: function code E; D-serine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the serine/threonine dehydratase family. DsdA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788708, Length=408, Percent_Identity=99.0196078431373, Blast_Score=833, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011780
- InterPro:   IPR001926
- InterPro:   IPR000634 [H]

Pfam domain/function: PF00291 PALP [H]

EC number: =4.3.1.18 [H]

Molecular weight: Translated: 44099; Mature: 43968

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: PS00165 DEHYDRATASE_SER_THR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEGLPYVGLTEQDVQDAHARLSRFAPYLAKAFAETAATGGIIESELVAIPAMQKRLEKE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
YQQPISGQLLLKKDSHLPISSSIKARGGIYEVLAHAEKLALEAGLLTLDDDYSKLLSPEF
HHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEECCCHHHHCCHHH
KQFFSQYSIAVGSTGNLGLSIGIMSARIGFKVTVHMSADARAWKKAKLRSHGVTVVEYEQ
HHHHHHHEEEECCCCCCEEEEEEEEEECCEEEEEEECCCHHHHHHHHHHHCCEEEEEECC
DYGVAVEEGRKAAQSDPNCFFIDDENSRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFV
CCCCCHHHCCHHHCCCCCEEEEECCCCCEEEEEEHHHHHHHHHHHHHCCCEEECCCCEEE
YLPCGVGGGPGGVAFGLKLAFGDHVHCFFAEPTHSPCMLLGVHTGLHDQISVQDIGIDNL
EEECCCCCCCCCCEEEEEEEECCEEEEEEECCCCCCEEEEEECCCCCCCEEEEECCCCCC
TAADGLAVGRASGFVGRAMVRLLDGFYTLSDQTMYDMLGWLAQEEGIRLEPSALAGMAGP
CCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEECHHHHHCCCCH
QRVCASVSYQQMHGFSAEQLRNTTHLVWATGGGMVPEEEMNQYLAKGR
HHHHHHCCHHHHCCCCHHHHCCCEEEEEECCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
AEGLPYVGLTEQDVQDAHARLSRFAPYLAKAFAETAATGGIIESELVAIPAMQKRLEKE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
YQQPISGQLLLKKDSHLPISSSIKARGGIYEVLAHAEKLALEAGLLTLDDDYSKLLSPEF
HHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEECCCHHHHCCHHH
KQFFSQYSIAVGSTGNLGLSIGIMSARIGFKVTVHMSADARAWKKAKLRSHGVTVVEYEQ
HHHHHHHEEEECCCCCCEEEEEEEEEECCEEEEEEECCCHHHHHHHHHHHCCEEEEEECC
DYGVAVEEGRKAAQSDPNCFFIDDENSRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFV
CCCCCHHHCCHHHCCCCCEEEEECCCCCEEEEEEHHHHHHHHHHHHHCCCEEECCCCEEE
YLPCGVGGGPGGVAFGLKLAFGDHVHCFFAEPTHSPCMLLGVHTGLHDQISVQDIGIDNL
EEECCCCCCCCCCEEEEEEEECCEEEEEEECCCCCCEEEEEECCCCCCCEEEEECCCCCC
TAADGLAVGRASGFVGRAMVRLLDGFYTLSDQTMYDMLGWLAQEEGIRLEPSALAGMAGP
CCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEECHHHHHCCCCH
QRVCASVSYQQMHGFSAEQLRNTTHLVWATGGGMVPEEEMNQYLAKGR
HHHHHHCCHHHHCCCCHHHHCCCEEEEEECCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA