| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is yfcG [H]
Identifier: 82544781
GI number: 82544781
Start: 2328739
End: 2329386
Strand: Direct
Name: yfcG [H]
Synonym: SBO_2337
Alternate gene names: 82544781
Gene position: 2328739-2329386 (Clockwise)
Preceding gene: 161984899
Following gene: 82544782
Centisome position: 51.52
GC content: 51.08
Gene sequence:
>648_bases ATGATCGATCTCTATTTCGCCCCGACACCCAATGGTCACAAAATTACGCTGTTTCTCGAAGAAGCAGAGCTTGATTATCG CTTGATTAAGGTAGACCTGGGGAAAGGCGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAACAAAATTCCGG CAATTGTTGATCATTCTCCTGCCGATGGCGGCGAACCGCTAAGCCTCTTTGAATCTGGTGCCATTTTGTTGTATCTGGCT GAGAAAACGGGGCTCTTTTTGAGTCATGAAACGCGTGAACGCGCCGCCACATTACAGTGGTTATTCTGGCAGGTAGGCGA ACTGGGGCCGATGCTTGGGCAAAATCATCATTTTAATCACGCAGCCCCCCAAACCATTCCTTACGCTATTGAACGTTATC AGGTTGAAACTCAGCGTCTTTACCATGTACTAAACAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGC ATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTCGCAATGTATCCGGCAGTCAA GAACTGGCATGAGCGGATCCGTTCGCGCCCTGCCACCGGGCAGGCACTGCTAAAAGCACAACTCGGTGATGAGCGTTCGG ATAGTTAA
Upstream 100 bases:
>100_bases CTATAGAGCCTTTTTGTCACTGTCACGTGACGAATACTCACGTAAGTCGCCGCGCTTTCTATACTTGTGGTGTTCAGATG ATTAAACAACCGGAGCTGCA
Downstream 100 bases:
>100_bases CAGAAACAGGTTCTCGTGTATTATTTCATCCTAAGTAAAACAACGGAGAACCTGCAATGGCACAACCTGCCGCTATTATT CGTATAAAGAACCTTCGTTT
Product: glutathione S-transferase
Products: NA
Alternate protein names: GST-like protein yfcG [H]
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MIDLYFAPTPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLRISPNNKIPAIVDHSPADGGEPLSLFESGAILLYLA EKTGLFLSHETRERAATLQWLFWQVGELGPMLGQNHHFNHAAPQTIPYAIERYQVETQRLYHVLNKRLENSPWLGGENYS IADIACWPWVNAWTRQRIDLAMYPAVKNWHERIRSRPATGQALLKAQLGDERSDS
Sequences:
>Translated_215_residues MIDLYFAPTPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLRISPNNKIPAIVDHSPADGGEPLSLFESGAILLYLA EKTGLFLSHETRERAATLQWLFWQVGELGPMLGQNHHFNHAAPQTIPYAIERYQVETQRLYHVLNKRLENSPWLGGENYS IADIACWPWVNAWTRQRIDLAMYPAVKNWHERIRSRPATGQALLKAQLGDERSDS >Mature_215_residues MIDLYFAPTPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLRISPNNKIPAIVDHSPADGGEPLSLFESGAILLYLA EKTGLFLSHETRERAATLQWLFWQVGELGPMLGQNHHFNHAAPQTIPYAIERYQVETQRLYHVLNKRLENSPWLGGENYS IADIACWPWVNAWTRQRIDLAMYPAVKNWHERIRSRPATGQALLKAQLGDERSDS
Specific function: Has disulfide bond reductase activity (in vitro). Has low hydroperoxidase activity with cumene hydroperoxide. Has very low glutathione-S-transferase activity (in vitro) [H]
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1788640, Length=215, Percent_Identity=99.5348837209302, Blast_Score=443, Evalue=1e-126, Organism=Escherichia coli, GI87082195, Length=213, Percent_Identity=40.3755868544601, Blast_Score=152, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6324100, Length=233, Percent_Identity=33.4763948497854, Blast_Score=117, Evalue=2e-27, Organism=Drosophila melanogaster, GI28571670, Length=164, Percent_Identity=28.0487804878049, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI17864598, Length=207, Percent_Identity=28.5024154589372, Blast_Score=77, Evalue=9e-15, Organism=Drosophila melanogaster, GI17864592, Length=201, Percent_Identity=25.8706467661692, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI85725204, Length=203, Percent_Identity=27.5862068965517, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI17737923, Length=203, Percent_Identity=27.5862068965517, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI24646249, Length=203, Percent_Identity=28.0788177339901, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI17864594, Length=195, Percent_Identity=25.1282051282051, Blast_Score=70, Evalue=8e-13, Organism=Drosophila melanogaster, GI45549270, Length=201, Percent_Identity=24.8756218905473, Blast_Score=70, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 24588; Mature: 24588
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDLYFAPTPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLRISPNNKIPAIVDHSP CEEEEECCCCCCCEEEEEEEECCCCEEEEEEEECCCCCCCCEEEEECCCCCCCEEEECCC ADGGEPLSLFESGAILLYLAEKTGLFLSHETRERAATLQWLFWQVGELGPMLGQNHHFNH CCCCCCHHHHCCCEEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHCCHHCCCCCCCCC AAPQTIPYAIERYQVETQRLYHVLNKRLENSPWLGGENYSIADIACWPWVNAWTRQRIDL CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHCCEE AMYPAVKNWHERIRSRPATGQALLKAQLGDERSDS EECHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCC >Mature Secondary Structure MIDLYFAPTPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLRISPNNKIPAIVDHSP CEEEEECCCCCCCEEEEEEEECCCCEEEEEEEECCCCCCCCEEEEECCCCCCCEEEECCC ADGGEPLSLFESGAILLYLAEKTGLFLSHETRERAATLQWLFWQVGELGPMLGQNHHFNH CCCCCCHHHHCCCEEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHCCHHCCCCCCCCC AAPQTIPYAIERYQVETQRLYHVLNKRLENSPWLGGENYSIADIACWPWVNAWTRQRIDL CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHCCEE AMYPAVKNWHERIRSRPATGQALLKAQLGDERSDS EECHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]