| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
Click here to switch to the map view.
The map label for this gene is 82544771
Identifier: 82544771
GI number: 82544771
Start: 2319175
End: 2319450
Strand: Reverse
Name: 82544771
Synonym: SBO_2327
Alternate gene names: NA
Gene position: 2319450-2319175 (Counterclockwise)
Preceding gene: 82544772
Following gene: 82544770
Centisome position: 51.32
GC content: 55.43
Gene sequence:
>276_bases ATGGTTCTGGAAAGTCAGGGCGAATATGACTCACAGTGGGCGGCAATTTGTTCCATTGCCCCAAAGATTGGCTGTACACC GGAGACTCTGCGTGTCTGGGTACGCCAGCATGAGCGGGATACCGGAGGCGGTGATGGCGGGCTCACCACCGCTAAACGTC AGCGTCTGAAAGAGCTGGAACGTGAAAATCGTGAACTGCGCCGCAGTAACGATATCCTTCGCCAGGCTTCCGCTTATTTT GCGAAGGCGGAGTTCGACCGCCTCTGGAAAAAGTGA
Upstream 100 bases:
>100_bases CGCCCCGGGAATCCTGGAGACTAAACTTCCTGAGAAAGAGGTAAACAGGATGACTAAAAATACTCGTTTTTCCCCCGAAG TCCGTCAGAGGGCGATTCGT
Downstream 100 bases:
>100_bases TGCCACTGCTGGATAAGCTGCGTAAGCTGTACGGGGTCGGACCGGTATGCAGTGAACTACATATTGCCCCGTCAACGTAT TACCACTGTCAGCAACAGCG
Product: IS629 ORF1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 91; Mature: 91
Protein sequence:
>91_residues MVLESQGEYDSQWAAICSIAPKIGCTPETLRVWVRQHERDTGGGDGGLTTAKRQRLKELERENRELRRSNDILRQASAYF AKAEFDRLWKK
Sequences:
>Translated_91_residues MVLESQGEYDSQWAAICSIAPKIGCTPETLRVWVRQHERDTGGGDGGLTTAKRQRLKELERENRELRRSNDILRQASAYF AKAEFDRLWKK >Mature_91_residues MVLESQGEYDSQWAAICSIAPKIGCTPETLRVWVRQHERDTGGGDGGLTTAKRQRLKELERENRELRRSNDILRQASAYF AKAEFDRLWKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002514 [H]
Pfam domain/function: PF01527 Transposase_8 [H]
EC number: NA
Molecular weight: Translated: 10524; Mature: 10524
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLESQGEYDSQWAAICSIAPKIGCTPETLRVWVRQHERDTGGGDGGLTTAKRQRLKELE CCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH RENRELRRSNDILRQASAYFAKAEFDRLWKK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVLESQGEYDSQWAAICSIAPKIGCTPETLRVWVRQHERDTGGGDGGLTTAKRQRLKELE CCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH RENRELRRSNDILRQASAYFAKAEFDRLWKK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12704152 [H]