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The map label for this gene is ycbZ [H]

Identifier: 82544721

GI number: 82544721

Start: 2262022

End: 2263782

Strand: Direct

Name: ycbZ [H]

Synonym: SBO_2276

Alternate gene names: 82544721

Gene position: 2262022-2263782 (Clockwise)

Preceding gene: 82544719

Following gene: 82544722

Centisome position: 50.05

GC content: 51.73

Gene sequence:

>1761_bases
TTGACCATTACGAAACTTGCATGGCGTGACCTGGTTCCTGATACCGATAGCTATCAGGAAATATTTGCTCAGCCACATTT
GATTGACGAAAACGATCCTTTATTCAGTGATACTCAACCGCGACTGCAATTTGCGCTGGAGCAGTTGCTGCATACGCGAG
CATCCTCCTCTTTTATGCTGGCTAAGGCCCCGGAAGAGTCTGAGTATCTGAATCTTATTGCCGATGCCGCGCGTACGCTA
CAAAGCGATGCAGGCCAACTGGTGGGCGATCACTATGAGGTTTCCGGCCACTCCATCCGCTTACGTCACGCAGTGAGTGC
AGATGATAATTTTGCGACTTTAACGCAAGTTGTCGCTGCCGACTGGGTAGAAGCGGAGCAACTCTTTGGCTGCCTGCGCC
AGTTTAATGGCGACATTACCCTGCAGCCTGGTTTGGTGCATCAGGCAAATGGCGGTATTCTCATCATCTCTTTGCGTACA
CTGCTGGCGCAACCTCTGCTGTGGATGCGGCTGAAAAATATCGTTAACCGCGAGCGTTTTGACTGGGTTGCGTTTGATGA
GTCGCGCCCTCTCCCCGTCTCTGTGCCTTCGATGCCATTGAAGCTGAAAGTCATTCTGGTAGGCGAACGCGAATCATTGG
CTGATTTCCAGGAGATGGAGCCAGAGCTTTCAGAGCAGGCTATTTATAGCGAATTTGAAGATACTCTGCAGATTGTCGAT
GCGGAGTCAGTAAGCCAGTGGTGTCGCTGGGTGACATTTACCGCCAGACATAATCACTTACCTGCCCCGGGAGCGGATGC
CTGGCCGGTACTTATCCGCGAAGCAGCACGCTACACCGGTGAACAAGAAACACTTCCGCTTAGCCCGCAGTGGATCCTCC
GCCAGTGTAAAGAGGTCGCCTCCCTGTGTGATGGCGACACCTTCTCCGGCGAGCAGCTAAACTTAATGCTGCAGCAGCGT
GAATGGCGCGAAGGTTTCCTCGCTGAACGTATGCAGGATGAGATCCTTCAGGAGCAAATCCTGATTGAAACCGAAGGCGA
ACGCATCGGGCAAATTAACGCCCTTTCGGTCATTGAATTTCCGGGTCATCCACGCGCTTTTGGCGAACCTTCTCGCATTA
GCTGCGTTGTGCATATTGGCGATGGTGAATTCACCGACATCGAACGCAAAGCGGAACTTGGCGGCAATATCCATGCGAAA
GGGATGATGATCATGCAAGCGTTCCTGATGTCGGAACTACAGCTTGAGCAACAGATCCCCTTCTCAGCATCGCTGACATT
TGAGCAGTCATACAGTGAAGTTGATGGAGATAGTGCCTCGATGGCTGAACTCTGCGCCCTGATAAGCGCCCTCGCCGATG
TGCCGGTGAATCAGAGTATCGCTATCACAGGTTCAGTCGATCAGTTCGGTCGCGCCCAGCCGGTCGGTGGTTTAAATGAG
AAAATCGAAGGCTTCTTTGCTATTTGCCAGCAACGTGAGTTAACCGGGAAACAAGGTGTCATTATCCCCACAGCTAACGT
TCGCCATTTAAGTCTTCACAGTGAACTGGTGAAAGCGGTAGAAGAAGGCAAATTCACCATCTGGGCAGTAGACGATGTGA
CTGACGCACTGCCGTTATTATTAAATCTGGTGTGGGATGGCGAAGGCCAAACGACGCTGATGCAAACCATCCAGGAACGT
ATCGCGCAAGCATCGCAACAGGAAGGACGTCACCGTTTTCCATGGCCATTACGTTGGCTGAACTGGTTTATTCCGAACTG
A

Upstream 100 bases:

>100_bases
TTAACGCCCAGCCAGGAGTATTGTCGGTGCTTTCTACGTGTGCTGTAGTGCCGGTTACGGTATAATCGCGGCTTTGACAA
CAGACTAAAAAACATCAACT

Downstream 100 bases:

>100_bases
TCGGACTTGTTCAGCGTACACGTGTTAGCTATCCTGCGTGCTTCAATAAAATAAGGCTTACAGAGAACATGGTAGATAAA
CGCGAATCCTATACAAAAGA

Product: ATP-dependent protease

Products: NA

Alternate protein names: ATP-dependent protease La homolog [H]

Number of amino acids: Translated: 586; Mature: 585

Protein sequence:

>586_residues
MTITKLAWRDLVPDTDSYQEIFAQPHLIDENDPLFSDTQPRLQFALEQLLHTRASSSFMLAKAPEESEYLNLIADAARTL
QSDAGQLVGDHYEVSGHSIRLRHAVSADDNFATLTQVVAADWVEAEQLFGCLRQFNGDITLQPGLVHQANGGILIISLRT
LLAQPLLWMRLKNIVNRERFDWVAFDESRPLPVSVPSMPLKLKVILVGERESLADFQEMEPELSEQAIYSEFEDTLQIVD
AESVSQWCRWVTFTARHNHLPAPGADAWPVLIREAARYTGEQETLPLSPQWILRQCKEVASLCDGDTFSGEQLNLMLQQR
EWREGFLAERMQDEILQEQILIETEGERIGQINALSVIEFPGHPRAFGEPSRISCVVHIGDGEFTDIERKAELGGNIHAK
GMMIMQAFLMSELQLEQQIPFSASLTFEQSYSEVDGDSASMAELCALISALADVPVNQSIAITGSVDQFGRAQPVGGLNE
KIEGFFAICQQRELTGKQGVIIPTANVRHLSLHSELVKAVEEGKFTIWAVDDVTDALPLLLNLVWDGEGQTTLMQTIQER
IAQASQQEGRHRFPWPLRWLNWFIPN

Sequences:

>Translated_586_residues
MTITKLAWRDLVPDTDSYQEIFAQPHLIDENDPLFSDTQPRLQFALEQLLHTRASSSFMLAKAPEESEYLNLIADAARTL
QSDAGQLVGDHYEVSGHSIRLRHAVSADDNFATLTQVVAADWVEAEQLFGCLRQFNGDITLQPGLVHQANGGILIISLRT
LLAQPLLWMRLKNIVNRERFDWVAFDESRPLPVSVPSMPLKLKVILVGERESLADFQEMEPELSEQAIYSEFEDTLQIVD
AESVSQWCRWVTFTARHNHLPAPGADAWPVLIREAARYTGEQETLPLSPQWILRQCKEVASLCDGDTFSGEQLNLMLQQR
EWREGFLAERMQDEILQEQILIETEGERIGQINALSVIEFPGHPRAFGEPSRISCVVHIGDGEFTDIERKAELGGNIHAK
GMMIMQAFLMSELQLEQQIPFSASLTFEQSYSEVDGDSASMAELCALISALADVPVNQSIAITGSVDQFGRAQPVGGLNE
KIEGFFAICQQRELTGKQGVIIPTANVRHLSLHSELVKAVEEGKFTIWAVDDVTDALPLLLNLVWDGEGQTTLMQTIQER
IAQASQQEGRHRFPWPLRWLNWFIPN
>Mature_585_residues
TITKLAWRDLVPDTDSYQEIFAQPHLIDENDPLFSDTQPRLQFALEQLLHTRASSSFMLAKAPEESEYLNLIADAARTLQ
SDAGQLVGDHYEVSGHSIRLRHAVSADDNFATLTQVVAADWVEAEQLFGCLRQFNGDITLQPGLVHQANGGILIISLRTL
LAQPLLWMRLKNIVNRERFDWVAFDESRPLPVSVPSMPLKLKVILVGERESLADFQEMEPELSEQAIYSEFEDTLQIVDA
ESVSQWCRWVTFTARHNHLPAPGADAWPVLIREAARYTGEQETLPLSPQWILRQCKEVASLCDGDTFSGEQLNLMLQQRE
WREGFLAERMQDEILQEQILIETEGERIGQINALSVIEFPGHPRAFGEPSRISCVVHIGDGEFTDIERKAELGGNIHAKG
MMIMQAFLMSELQLEQQIPFSASLTFEQSYSEVDGDSASMAELCALISALADVPVNQSIAITGSVDQFGRAQPVGGLNEK
IEGFFAICQQRELTGKQGVIIPTANVRHLSLHSELVKAVEEGKFTIWAVDDVTDALPLLLNLVWDGEGQTTLMQTIQERI
AQASQQEGRHRFPWPLRWLNWFIPN

Specific function: Unknown

COG id: COG1067

COG function: function code O; Predicted ATP-dependent protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S16 family [H]

Homologues:

Organism=Escherichia coli, GI1787188, Length=586, Percent_Identity=99.3174061433447, Blast_Score=1194, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008269
- InterPro:   IPR001984
- InterPro:   IPR020568 [H]

Pfam domain/function: PF05362 Lon_C [H]

EC number: 3.4.21.-

Molecular weight: Translated: 65850; Mature: 65719

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTITKLAWRDLVPDTDSYQEIFAQPHLIDENDPLFSDTQPRLQFALEQLLHTRASSSFML
CCCCHHHHHHCCCCCCHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEE
AKAPEESEYLNLIADAARTLQSDAGQLVGDHYEVSGHSIRLRHAVSADDNFATLTQVVAA
EECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEEECCCCCCHHHHHHHHHH
DWVEAEQLFGCLRQFNGDITLQPGLVHQANGGILIISLRTLLAQPLLWMRLKNIVNRERF
HHHHHHHHHHHHHHHCCCEEECCCCEEECCCCEEEEEHHHHHHHHHHHHHHHHHHCHHHC
DWVAFDESRPLPVSVPSMPLKLKVILVGERESLADFQEMEPELSEQAIYSEFEDTLQIVD
CEEEECCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHC
AESVSQWCRWVTFTARHNHLPAPGADAWPVLIREAARYTGEQETLPLSPQWILRQCKEVA
HHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
SLCDGDTFSGEQLNLMLQQREWREGFLAERMQDEILQEQILIETEGERIGQINALSVIEF
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEEEEC
PGHPRAFGEPSRISCVVHIGDGEFTDIERKAELGGNIHAKGMMIMQAFLMSELQLEQQIP
CCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCC
FSASLTFEQSYSEVDGDSASMAELCALISALADVPVNQSIAITGSVDQFGRAQPVGGLNE
CCEEEEHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECHHHCCCCCCCCCCHH
KIEGFFAICQQRELTGKQGVIIPTANVRHLSLHSELVKAVEEGKFTIWAVDDVTDALPLL
HHHHHHHHHHHHHCCCCCCEEEECCCCEEHHHHHHHHHHHHCCCEEEEEECHHHHHHHHH
LNLVWDGEGQTTLMQTIQERIAQASQQEGRHRFPWPLRWLNWFIPN
HHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCC
>Mature Secondary Structure 
TITKLAWRDLVPDTDSYQEIFAQPHLIDENDPLFSDTQPRLQFALEQLLHTRASSSFML
CCCHHHHHHCCCCCCHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEE
AKAPEESEYLNLIADAARTLQSDAGQLVGDHYEVSGHSIRLRHAVSADDNFATLTQVVAA
EECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEEECCCCCCHHHHHHHHHH
DWVEAEQLFGCLRQFNGDITLQPGLVHQANGGILIISLRTLLAQPLLWMRLKNIVNRERF
HHHHHHHHHHHHHHHCCCEEECCCCEEECCCCEEEEEHHHHHHHHHHHHHHHHHHCHHHC
DWVAFDESRPLPVSVPSMPLKLKVILVGERESLADFQEMEPELSEQAIYSEFEDTLQIVD
CEEEECCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHC
AESVSQWCRWVTFTARHNHLPAPGADAWPVLIREAARYTGEQETLPLSPQWILRQCKEVA
HHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
SLCDGDTFSGEQLNLMLQQREWREGFLAERMQDEILQEQILIETEGERIGQINALSVIEF
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEEEEC
PGHPRAFGEPSRISCVVHIGDGEFTDIERKAELGGNIHAKGMMIMQAFLMSELQLEQQIP
CCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCC
FSASLTFEQSYSEVDGDSASMAELCALISALADVPVNQSIAITGSVDQFGRAQPVGGLNE
CCEEEEHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECHHHCCCCCCCCCCHH
KIEGFFAICQQRELTGKQGVIIPTANVRHLSLHSELVKAVEEGKFTIWAVDDVTDALPLL
HHHHHHHHHHHHHCCCCCCEEEECCCCEEHHHHHHHHHHHHCCCEEEEEECHHHHHHHHH
LNLVWDGEGQTTLMQTIQERIAQASQQEGRHRFPWPLRWLNWFIPN
HHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]