| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is yccX [H]
Identifier: 82544708
GI number: 82544708
Start: 2249972
End: 2250250
Strand: Reverse
Name: yccX [H]
Synonym: SBO_2263
Alternate gene names: 82544708
Gene position: 2250250-2249972 (Counterclockwise)
Preceding gene: 82544711
Following gene: 82544705
Centisome position: 49.79
GC content: 51.97
Gene sequence:
>279_bases ATGTCGAAAATCTGCATAATTGCCTGGATTTACGGGCGAGTTCAGGGCGTAGGATTTCGCTACACCACACAGTACGAAGC GAAAAGACTGGGTTTAACCGGGTACGCCAAAAATCTTGACGATGGCAGCGTGGAAGTGGTTGCCTGCGGTGAAGAAGGGC AGGTGGAAAAATTAATGCAGTGGTTAAAGAGTGGCGGCCCGCGTTCTGCGCGTGTAGAACGGGTGCTCAGCGAGCCGCAT CATCCCTCGGGGGAATTAACCGATTTTCGTATCCGTTAA
Upstream 100 bases:
>100_bases ACTCATAATTTACTTTTCTGTCGATGCAAAGAAATGGGCGTCATTGTCCGGAGTTTTCCATGGATTTGCAACGCGTCCAT TAAGGATAAGGAGAGCAGCA
Downstream 100 bases:
>100_bases ATACATTTTACCGGTTTTGGCAGGCCAGCAATTTTGGTGGCTTGCTTAGCCGGACCTTTCGGAAACAGTCGGTATAAATA GCGGCTGTTACCTTTTTCTT
Product: acylphosphatase
Products: NA
Alternate protein names: Acylphosphate phosphohydrolase [H]
Number of amino acids: Translated: 92; Mature: 91
Protein sequence:
>92_residues MSKICIIAWIYGRVQGVGFRYTTQYEAKRLGLTGYAKNLDDGSVEVVACGEEGQVEKLMQWLKSGGPRSARVERVLSEPH HPSGELTDFRIR
Sequences:
>Translated_92_residues MSKICIIAWIYGRVQGVGFRYTTQYEAKRLGLTGYAKNLDDGSVEVVACGEEGQVEKLMQWLKSGGPRSARVERVLSEPH HPSGELTDFRIR >Mature_91_residues SKICIIAWIYGRVQGVGFRYTTQYEAKRLGLTGYAKNLDDGSVEVVACGEEGQVEKLMQWLKSGGPRSARVERVLSEPHH PSGELTDFRIR
Specific function: Unknown
COG id: COG1254
COG function: function code C; Acylphosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 acylphosphatase-like domain [H]
Homologues:
Organism=Escherichia coli, GI1787203, Length=92, Percent_Identity=97.8260869565217, Blast_Score=190, Evalue=1e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020456 - InterPro: IPR001792 - InterPro: IPR017968 [H]
Pfam domain/function: PF00708 Acylphosphatase [H]
EC number: =3.6.1.7 [H]
Molecular weight: Translated: 10328; Mature: 10197
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: PS00150 ACYLPHOSPHATASE_1 ; PS00151 ACYLPHOSPHATASE_2 ; PS51160 ACYLPHOSPHATASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKICIIAWIYGRVQGVGFRYTTQYEAKRLGLTGYAKNLDDGSVEVVACGEEGQVEKLMQ CCCEEEEEEEECCCCCCCEEEECCCCHHHCCCCCCCCCCCCCCEEEEEECCCCCHHHHHH WLKSGGPRSARVERVLSEPHHPSGELTDFRIR HHHCCCCCHHHHHHHHCCCCCCCCCCEEEEEC >Mature Secondary Structure SKICIIAWIYGRVQGVGFRYTTQYEAKRLGLTGYAKNLDDGSVEVVACGEEGQVEKLMQ CCEEEEEEEECCCCCCCEEEECCCCHHHCCCCCCCCCCCCCCEEEEEECCCCCHHHHHH WLKSGGPRSARVERVLSEPHHPSGELTDFRIR HHHCCCCCHHHHHHHHCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]