| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is hyaE [H]
Identifier: 82544701
GI number: 82544701
Start: 2243563
End: 2243961
Strand: Reverse
Name: hyaE [H]
Synonym: SBO_2255
Alternate gene names: 82544701
Gene position: 2243961-2243563 (Counterclockwise)
Preceding gene: 82544702
Following gene: 82544700
Centisome position: 49.65
GC content: 56.39
Gene sequence:
>399_bases ATGAGCAACGACACGCCATTTGATGCGTTGTGGCAACGAATGCTGGCGCGCGGCTGGACGCCGGTCAGTGAATCCCGTCT TGACGACTGGCTTACGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCACGCCAGAGGTCAGCGATA ATCCGGTAATGATTGGCGAATTACTGCACGAGTTTCCCGACTATACATGGCAGGTGGCGATTGCTGACCTTGAGCAGAGC GAAGCCATCGGCGATCGCTTTGGCGTCTTTCGCTTTCCTACCACTTTAGTGTTTACCGGCGGAAACTATCGCGGCGTGCT GAATGGTATTCACCCGTGGGCGGAACTGATAAACCTGATGCGCGGGCTTGTCGAACCGCAGCAGGAGCGTGCCTCATGA
Upstream 100 bases:
>100_bases TGGCTAATGAATCGCGTTGTCTCAATTATGACTGTCTGTCGATGGAAAATTACGAAGGCGTTCGCTTGCGCCAGTACCGG ATGACACAGGAGGAGCAGGG
Downstream 100 bases:
>100_bases GCGAAATTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGAACGATGACAGTTTCAGCATGAATCCACTGCCGATCACC TGTCAGGTGAATGATGAACC
Product: hydrogenase-1 operon protein HyaE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MSNDTPFDALWQRMLARGWTPVSESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQS EAIGDRFGVFRFPTTLVFTGGNYRGVLNGIHPWAELINLMRGLVEPQQERAS
Sequences:
>Translated_132_residues MSNDTPFDALWQRMLARGWTPVSESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQS EAIGDRFGVFRFPTTLVFTGGNYRGVLNGIHPWAELINLMRGLVEPQQERAS >Mature_131_residues SNDTPFDALWQRMLARGWTPVSESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSE AIGDRFGVFRFPTTLVFTGGNYRGVLNGIHPWAELINLMRGLVEPQQERAS
Specific function: Not known. Could form, along with hyaD, a complex involved in the processing of the hydrogenase 1 structural operon [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hupG/hyaE family [H]
Homologues:
Organism=Escherichia coli, GI1787210, Length=132, Percent_Identity=98.4848484848485, Blast_Score=266, Evalue=3e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010893 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF07449 HyaE [H]
EC number: NA
Molecular weight: Translated: 14901; Mature: 14770
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNDTPFDALWQRMLARGWTPVSESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGE CCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHH LLHEFPDYTWQVAIADLEQSEAIGDRFGVFRFPTTLVFTGGNYRGVLNGIHPWAELINLM HHHHCCCCEEEEEECCCHHHHHHHHHCCCEECCEEEEEECCCCCCHHCCCCHHHHHHHHH RGLVEPQQERAS HHHCCCHHHHCC >Mature Secondary Structure SNDTPFDALWQRMLARGWTPVSESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGE CCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHH LLHEFPDYTWQVAIADLEQSEAIGDRFGVFRFPTTLVFTGGNYRGVLNGIHPWAELINLM HHHHCCCCEEEEEECCCHHHHHHHHHCCCEECCEEEEEECCCCCCHHCCCCHHHHHHHHH RGLVEPQQERAS HHHCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2180913; 8905232; 9278503 [H]