| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
Click here to switch to the map view.
The map label for this gene is yccB [C]
Identifier: 82544697
GI number: 82544697
Start: 2239778
End: 2239870
Strand: Reverse
Name: yccB [C]
Synonym: SBO_2251
Alternate gene names: 82544697
Gene position: 2239870-2239778 (Counterclockwise)
Preceding gene: 82544698
Following gene: 82544696
Centisome position: 49.56
GC content: 46.24
Gene sequence:
>93_bases ATGTGGTATTTACTTTGGTTCGTCGGCATTTTGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCG TCTGAAAAGTTAA
Upstream 100 bases:
>100_bases GTTGCTCTACACTCTCTGGAGCTACTACAAAATGTGGGGGCGCATGACAACAGAAACTCTCCGCCGTAACGAAAACGAGT TGTACTAAGGAGCAGGAACA
Downstream 100 bases:
>100_bases CGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGA TGAAAGCGATCTTAATCCCA
Product: membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 30; Mature: 30
Protein sequence:
>30_residues MWYLLWFVGILLMCSLSTLVLVWLDPRLKS
Sequences:
>Translated_30_residues MWYLLWFVGILLMCSLSTLVLVWLDPRLKS >Mature_30_residues MWYLLWFVGILLMCSLSTLVLVWLDPRLKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI145693112, Length=30, Percent_Identity=100, Blast_Score=59, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3598; Mature: 3598
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 6.7 %Met (Translated Protein) 10.0 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 6.7 %Met (Mature Protein) 10.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWYLLWFVGILLMCSLSTLVLVWLDPRLKS CCHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MWYLLWFVGILLMCSLSTLVLVWLDPRLKS CCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA