| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is insG [H]
Identifier: 82544665
GI number: 82544665
Start: 2197768
End: 2198316
Strand: Reverse
Name: insG [H]
Synonym: SBO_2214
Alternate gene names: 82544665
Gene position: 2198316-2197768 (Counterclockwise)
Preceding gene: 82544666
Following gene: 82544664
Centisome position: 48.64
GC content: 50.46
Gene sequence:
>549_bases ATGGATAAAGGTTATTACTCACTGGGACTGTTAAATGCCCGGAGCCTGGCGGGAGAACACCGCCACTGGATGATACCTCT CAGAAAAGGAGCGCAATATGAAGAGCTCAGAAAACTGGGTAAAGGCGATCATCTGGTGAAGCTGAAAACCAGCCCGCAGG CACGAAAAAAGTGGCCGGGACTGGGAAATGAAGTGACAGCCCGCCTGCTGACCGTGACGCGCAAAGGAAAAGTCTGCCAT CTGCTGACGTCGATGACGGACGCCATGCGCTTCCCCGGAGGAGAAATGGCGGATCTGTACAGTCATCGCTGGGAAATTGA ACTGGGATACAGGGAGATAAAACAGACGATGCAACTGAGCAGGCTGACGCTGAGAAGTAAAAAGCCGGAGCTTGTGGAGC AAGAGCTGTGGGGTGTCTTACTGGCTTATAATCTGGTGAGATATCAGATGATTAAAATGGCGGAACATCTGAAAGGTTAC TGGCCGAATCAACTGAGTTTCTCAGAATCATGCGGAATGGTGGGTAATGCTGCCAACTTACTGATTTAG
Upstream 100 bases:
>100_bases CATCTGCTGACGGCTGCAGCCTTCGGCACGATGAAGAACAGCGAAAAATGAGCTTGCTGAGCAACTTATAGAACAAACCG GCGATAACACTCTGACGTTA
Downstream 100 bases:
>100_bases TGTATGATGGTGATTTTAAGGTGCTTGCGTGGCTTCCATTTCCATCAGATGTCCTTCCTGCTCCGCTACTGAAGGCGTAG TGCGTAACGGCAAAAGCACT
Product: IS4 orf
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MDKGYYSLGLLNARSLAGEHRHWMIPLRKGAQYEELRKLGKGDHLVKLKTSPQARKKWPGLGNEVTARLLTVTRKGKVCH LLTSMTDAMRFPGGEMADLYSHRWEIELGYREIKQTMQLSRLTLRSKKPELVEQELWGVLLAYNLVRYQMIKMAEHLKGY WPNQLSFSESCGMVGNAANLLI
Sequences:
>Translated_182_residues MDKGYYSLGLLNARSLAGEHRHWMIPLRKGAQYEELRKLGKGDHLVKLKTSPQARKKWPGLGNEVTARLLTVTRKGKVCH LLTSMTDAMRFPGGEMADLYSHRWEIELGYREIKQTMQLSRLTLRSKKPELVEQELWGVLLAYNLVRYQMIKMAEHLKGY WPNQLSFSESCGMVGNAANLLI >Mature_182_residues MDKGYYSLGLLNARSLAGEHRHWMIPLRKGAQYEELRKLGKGDHLVKLKTSPQARKKWPGLGNEVTARLLTVTRKGKVCH LLTSMTDAMRFPGGEMADLYSHRWEIELGYREIKQTMQLSRLTLRSKKPELVEQELWGVLLAYNLVRYQMIKMAEHLKGY WPNQLSFSESCGMVGNAANLLI
Specific function: Involved in the transposition of the insertion sequence IS4 [H]
COG id: COG3385
COG function: function code L; FOG: Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 11 family [H]
Homologues:
Organism=Escherichia coli, GI1790729, Length=174, Percent_Identity=97.7011494252874, Blast_Score=353, Evalue=6e-99,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012337 - InterPro: IPR002559 [H]
Pfam domain/function: PF01609 Transposase_11 [H]
EC number: NA
Molecular weight: Translated: 20917; Mature: 20917
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKGYYSLGLLNARSLAGEHRHWMIPLRKGAQYEELRKLGKGDHLVKLKTSPQARKKWPG CCCCEEEEECCHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCCCEEEEECCCHHHHHCCC LGNEVTARLLTVTRKGKVCHLLTSMTDAMRFPGGEMADLYSHRWEIELGYREIKQTMQLS CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCEEEEECHHHHHHHHHHH RLTLRSKKPELVEQELWGVLLAYNLVRYQMIKMAEHLKGYWPNQLSFSESCGMVGNAANL HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH LI CC >Mature Secondary Structure MDKGYYSLGLLNARSLAGEHRHWMIPLRKGAQYEELRKLGKGDHLVKLKTSPQARKKWPG CCCCEEEEECCHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCCCEEEEECCCHHHHHCCC LGNEVTARLLTVTRKGKVCHLLTSMTDAMRFPGGEMADLYSHRWEIELGYREIKQTMQLS CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCEEEEECHHHHHHHHHHH RLTLRSKKPELVEQELWGVLLAYNLVRYQMIKMAEHLKGYWPNQLSFSESCGMVGNAANL HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH LI CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 6268937; 7610040; 9278503 [H]