| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
Click here to switch to the map view.
The map label for this gene is yeiI [H]
Identifier: 82544622
GI number: 82544622
Start: 2142670
End: 2143758
Strand: Reverse
Name: yeiI [H]
Synonym: SBO_2167
Alternate gene names: 82544622
Gene position: 2143758-2142670 (Counterclockwise)
Preceding gene: 82544623
Following gene: 82544618
Centisome position: 47.43
GC content: 52.07
Gene sequence:
>1089_bases ATGAATAACCGGGAAAAGGAGATCCTTGCAATTTTACGGCGTAACCCGCTGATTCAGCAGAACGAAATTGCGGACATGCT GCAAATCAGTCGTTCGCGCGTTGCGGCGCATATTATGGATTTAATGCGCAAAGGGCGGATTAAAGGCAAAGGTTACATTC TCACCGAGCAGGAATACTGCGTAGTGGTGGGGACAATCAATATGGATATTCGCGGGATCGCGGATATCCGTTACCCGCAA GCGGCTTCTCATCCCGGTACAATTCATTGCTCGGCGGGCGGCGTGGGACGCAACATCGCCCACAATCTGGCGCTGTTAGG CCGTGACGTCCATTTGCTTTCAGTGATTGGCGATGACTTTTATGGCGAAATGCTCCTGGAAGAAACGCGCCGTGCCGGCG TGAATGTCTCCGGCTGCGTTCGTTTGCATGGTCAAAGCACATCGACGTATCTGGCAATTGCCAATCGAGACGATCAAACC GTGCTGGCGATTAACGATACCCATCTGCTGGAACAGTTGACACCGCAACTACTGAACGGGTCGCGCGATTTACTTCGTCA TGCGGGCGTGGTACTGGCTGATTGCAACCTGACAGCCGAGGCGCTGGAATGGGTCTTTACCCTCGCTGATGAAATCCCGG TGTTTGTCGATACCGTTTCAGAATTCAAAGCGGGCAAAATCAAACACTGGCTGGCGCATATTCACACCCTGAAACCCACT TTACCGGAGCTGGAAATTTTATGGGGACAGGCGATCACCAGCGATGCTGACCGTAATGCCGCAGTGAATGCATTGCATCA GCAAGGTGTTCAGCAACTGTTTGTTTATTTGCCCGATGAGTCAGTTTATTGCAGCGAAAAGGATGGAGAACAATTTTTGC TGACCGCGCCAGCGCATACGACAGTAGACAGTTTTGGTGCTGGCGATGGTTTTATGGCGGGCCTGGTATATAGCTTTCTT GAAGGATACAGTTTCCGCGACAGCGCCCGTTTTGCGGTAGCCTGCGCGGCAATTTCGCGCGCCAGCGGCAGCTTAAACAA CCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAA
Upstream 100 bases:
>100_bases ACGGCATTCCGCTGATCCTTGAAACCATCAACCCGGATATCTGGGCAGAAGAGATCGCCTGGCTGAAAGCGCAACAAACT GAAAAAGCGGTAGCCTGAAG
Downstream 100 bases:
>100_bases CAATGTTGCCGGATTCGACGCTTGACCGCATCTTATCCGGCTCATAAATTGCGCACTACGCTAAACCAATAAAGAATCCT GCAATAGTAGCACTCATCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MNNREKEILAILRRNPLIQQNEIADMLQISRSRVAAHIMDLMRKGRIKGKGYILTEQEYCVVVGTINMDIRGIADIRYPQ AASHPGTIHCSAGGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLAIANRDDQT VLAINDTHLLEQLTPQLLNGSRDLLRHAGVVLADCNLTAEALEWVFTLADEIPVFVDTVSEFKAGKIKHWLAHIHTLKPT LPELEILWGQAITSDADRNAAVNALHQQGVQQLFVYLPDESVYCSEKDGEQFLLTAPAHTTVDSFGAGDGFMAGLVYSFL EGYSFRDSARFAVACAAISRASGSLNNPTLSADNALSLVPMV
Sequences:
>Translated_362_residues MNNREKEILAILRRNPLIQQNEIADMLQISRSRVAAHIMDLMRKGRIKGKGYILTEQEYCVVVGTINMDIRGIADIRYPQ AASHPGTIHCSAGGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLAIANRDDQT VLAINDTHLLEQLTPQLLNGSRDLLRHAGVVLADCNLTAEALEWVFTLADEIPVFVDTVSEFKAGKIKHWLAHIHTLKPT LPELEILWGQAITSDADRNAAVNALHQQGVQQLFVYLPDESVYCSEKDGEQFLLTAPAHTTVDSFGAGDGFMAGLVYSFL EGYSFRDSARFAVACAAISRASGSLNNPTLSADNALSLVPMV >Mature_362_residues MNNREKEILAILRRNPLIQQNEIADMLQISRSRVAAHIMDLMRKGRIKGKGYILTEQEYCVVVGTINMDIRGIADIRYPQ AASHPGTIHCSAGGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLAIANRDDQT VLAINDTHLLEQLTPQLLNGSRDLLRHAGVVLADCNLTAEALEWVFTLADEIPVFVDTVSEFKAGKIKHWLAHIHTLKPT LPELEILWGQAITSDADRNAAVNALHQQGVQQLFVYLPDESVYCSEKDGEQFLLTAPAHTTVDSFGAGDGFMAGLVYSFL EGYSFRDSARFAVACAAISRASGSLNNPTLSADNALSLVPMV
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
Organism=Escherichia coli, GI1788484, Length=362, Percent_Identity=98.8950276243094, Blast_Score=741, Evalue=0.0, Organism=Escherichia coli, GI1788491, Length=307, Percent_Identity=39.7394136807818, Blast_Score=228, Evalue=3e-61, Organism=Escherichia coli, GI1790193, Length=262, Percent_Identity=23.6641221374046, Blast_Score=68, Evalue=9e-13, Organism=Escherichia coli, GI87081971, Length=266, Percent_Identity=24.812030075188, Blast_Score=67, Evalue=1e-12, Organism=Drosophila melanogaster, GI24580669, Length=284, Percent_Identity=26.7605633802817, Blast_Score=81, Evalue=9e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 - InterPro: IPR011991 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: NA
Molecular weight: Translated: 39589; Mature: 39589
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: PS00583 PFKB_KINASES_1 ; PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNREKEILAILRRNPLIQQNEIADMLQISRSRVAAHIMDLMRKGRIKGKGYILTEQEYC CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEE VVVGTINMDIRGIADIRYPQAASHPGTIHCSAGGVGRNIAHNLALLGRDVHLLSVIGDDF EEEEEECCCEEEEECCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCHH YGEMLLEETRRAGVNVSGCVRLHGQSTSTYLAIANRDDQTVLAINDTHLLEQLTPQLLNG HHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEECCCCCEEEEECCHHHHHHHHHHHHCC SRDLLRHAGVVLADCNLTAEALEWVFTLADEIPVFVDTVSEFKAGKIKHWLAHIHTLKPT CHHHHHHCCEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCC LPELEILWGQAITSDADRNAAVNALHQQGVQQLFVYLPDESVYCSEKDGEQFLLTAPAHT CCCHHHHHCHHHCCCCCCHHHHHHHHHHHHHEEEEECCCCCEEECCCCCCEEEEECCCCC TVDSFGAGDGFMAGLVYSFLEGYSFRDSARFAVACAAISRASGSLNNPTLSADNALSLVP CHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEC MV CC >Mature Secondary Structure MNNREKEILAILRRNPLIQQNEIADMLQISRSRVAAHIMDLMRKGRIKGKGYILTEQEYC CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEE VVVGTINMDIRGIADIRYPQAASHPGTIHCSAGGVGRNIAHNLALLGRDVHLLSVIGDDF EEEEEECCCEEEEECCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCHH YGEMLLEETRRAGVNVSGCVRLHGQSTSTYLAIANRDDQTVLAINDTHLLEQLTPQLLNG HHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEECCCCCEEEEECCHHHHHHHHHHHHCC SRDLLRHAGVVLADCNLTAEALEWVFTLADEIPVFVDTVSEFKAGKIKHWLAHIHTLKPT CHHHHHHCCEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCC LPELEILWGQAITSDADRNAAVNALHQQGVQQLFVYLPDESVYCSEKDGEQFLLTAPAHT CCCHHHHHCHHHCCCCCCHHHHHHHHHHHHHEEEEECCCCCEEECCCCCCEEEEECCCCC TVDSFGAGDGFMAGLVYSFLEGYSFRDSARFAVACAAISRASGSLNNPTLSADNALSLVP CHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEC MV CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503; 2460435 [H]