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The map label for this gene is flgB [H]

Identifier: 82544461

GI number: 82544461

Start: 1965308

End: 1965637

Strand: Reverse

Name: flgB [H]

Synonym: SBO_1991

Alternate gene names: 82544461

Gene position: 1965637-1965308 (Counterclockwise)

Preceding gene: 82544465

Following gene: 82544460

Centisome position: 43.49

GC content: 52.73

Gene sequence:

>330_bases
ATGCTCGATAAGCTCGACGCCGCCTTACGTTTTCAACAAGAGGCGCTCAATCTGCGCGCCCAGCGTCAGGAAGTGCTGGC
AGCAAACATCGCCAATGCCGATACCCTTGGTTATCAGGCGCGCGATATCGATTTTGCCAGTGAACTTAAAAAAGTCATGC
AACGTGGACGGGATGCAACCAGTGTGGTTGCTCTGACGATGACCTCAACGCAACACATTCCGGCGCAGGCGCTGACGCCT
CCTACCGCAGAACTGCAATACCAGATGAGCCTTAGTGCGTTGAGCGGGCAAATCAAAGGCATGATGAACGTTTTACAGAG
CGGAAATTAA

Upstream 100 bases:

>100_bases
AACGGCATAAATAGCGACCCATTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATTTAAGCTGATGGCAGAATT
TTGATACCTGCGGAGGAGAT

Downstream 100 bases:

>100_bases
CGGATGGCACTGCTGAATATTTTTGATATCGCCGGGTCGGCGTTAACTGCCCAGTCCCAGCGCCTGAACGTGGCGGCCAG
TAATCTGGCGAATGCTGATA

Product: cell-proximal portion of basal-body rod

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MLDKLDAALRFQQEALNLRAQRQEVLAANIANADTLGYQARDIDFASELKKVMQRGRDATSVVALTMTSTQHIPAQALTP
PTAELQYQMSLSALSGQIKGMMNVLQSGN

Sequences:

>Translated_109_residues
MLDKLDAALRFQQEALNLRAQRQEVLAANIANADTLGYQARDIDFASELKKVMQRGRDATSVVALTMTSTQHIPAQALTP
PTAELQYQMSLSALSGQIKGMMNVLQSGN
>Mature_109_residues
MLDKLDAALRFQQEALNLRAQRQEVLAANIANADTLGYQARDIDFASELKKVMQRGRDATSVVALTMTSTQHIPAQALTP
PTAELQYQMSLSALSGQIKGMMNVLQSGN

Specific function: Unknown

COG id: COG1815

COG function: function code N; Flagellar basal body protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787313, Length=138, Percent_Identity=78.2608695652174, Blast_Score=201, Evalue=9e-54,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006300 [H]

Pfam domain/function: PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 11892; Mature: 11892

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDKLDAALRFQQEALNLRAQRQEVLAANIANADTLGYQARDIDFASELKKVMQRGRDAT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCH
SVVALTMTSTQHIPAQALTPPTAELQYQMSLSALSGQIKGMMNVLQSGN
HEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLDKLDAALRFQQEALNLRAQRQEVLAANIANADTLGYQARDIDFASELKKVMQRGRDAT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCH
SVVALTMTSTQHIPAQALTPPTAELQYQMSLSALSGQIKGMMNVLQSGN
HEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]